| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222524325
Identifier: 222524325
GI number: 222524325
Start: 1333029
End: 1333406
Strand: Reverse
Name: 222524325
Synonym: Chy400_1048
Alternate gene names: NA
Gene position: 1333406-1333029 (Counterclockwise)
Preceding gene: 222524326
Following gene: 222524323
Centisome position: 25.31
GC content: 54.5
Gene sequence:
>378_bases ATGGCGGCATATCGCATTCTTATCTACGATGAAGACCCCACCGCAGCGCTGGTCACACAGCGTGGTTTACAGACATTGCT TGGCGATGAGGTTGTCGTACAGGTTGCCACAAATGCAAATGAAGCCTGGCTGACCTGTGCACACGGCAATGTTGATCTGC TCATTGTCGATCCCAGCCCGTACAGTGCTGCGGCGGCTTTAATTCGGGCTGTACGCACCTATCGACCGTATCTGCCAATC CTGGCTCTAACGGCCTACGATACACCCGGTCTGCGTGCCCGTATGCAGGCGTTGGGTGTTGAACTCTACGCGGCAAAGCC GATTGAATTGCGTGAACTGGTACCACTGGTTGCCCAGGTGTTACATCAAACCGTGTGA
Upstream 100 bases:
>100_bases GTCTCAAGTCTCGCCGGAACCATCACAACCACGTAGGATGAATAGCAAAGCATAACCTTCTGCTACCACCGAACTCTATC CGTATCTGGAAGCAGGTACC
Downstream 100 bases:
>100_bases GTCATTGGGTGTGTTTCCATTCTTCCTCACTCTACCTTTGGTACTTCAAGTGGCAGTAAAATAGTGAACGTGGTTCCCGA CCCTGGCTGACTATCGACCA
Product: response regulator receiver protein
Products: NA
Alternate protein names: Response Regulator Receiver
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MAAYRILIYDEDPTAALVTQRGLQTLLGDEVVVQVATNANEAWLTCAHGNVDLLIVDPSPYSAAAALIRAVRTYRPYLPI LALTAYDTPGLRARMQALGVELYAAKPIELRELVPLVAQVLHQTV
Sequences:
>Translated_125_residues MAAYRILIYDEDPTAALVTQRGLQTLLGDEVVVQVATNANEAWLTCAHGNVDLLIVDPSPYSAAAALIRAVRTYRPYLPI LALTAYDTPGLRARMQALGVELYAAKPIELRELVPLVAQVLHQTV >Mature_124_residues AAYRILIYDEDPTAALVTQRGLQTLLGDEVVVQVATNANEAWLTCAHGNVDLLIVDPSPYSAAAALIRAVRTYRPYLPIL ALTAYDTPGLRARMQALGVELYAAKPIELRELVPLVAQVLHQTV
Specific function: Unknown
COG id: COG2204
COG function: function code T; Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13626; Mature: 13495
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAYRILIYDEDPTAALVTQRGLQTLLGDEVVVQVATNANEAWLTCAHGNVDLLIVDPSP CCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCC YSAAAALIRAVRTYRPYLPILALTAYDTPGLRARMQALGVELYAAKPIELRELVPLVAQV HHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCEEEEECCCCCHHHHHHHHHHH LHQTV HHHCC >Mature Secondary Structure AAYRILIYDEDPTAALVTQRGLQTLLGDEVVVQVATNANEAWLTCAHGNVDLLIVDPSP CEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCC YSAAAALIRAVRTYRPYLPILALTAYDTPGLRARMQALGVELYAAKPIELRELVPLVAQV HHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCEEEEECCCCCHHHHHHHHHHH LHQTV HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA