| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524267
Identifier: 222524267
GI number: 222524267
Start: 1265415
End: 1266770
Strand: Direct
Name: 222524267
Synonym: Chy400_0990
Alternate gene names: NA
Gene position: 1265415-1266770 (Clockwise)
Preceding gene: 222524261
Following gene: 222524268
Centisome position: 24.02
GC content: 64.53
Gene sequence:
>1356_bases ATGGTAATGGTTATTGATGTCATTTCAGACCGACGACAGCATCGCTGCGCTTGTAGCCGGCCTGGGTATCGTCAACAATG CTCTGCCAATCACAAGAGGGTTTCAACCGCTCTCACCCCTACAACCGTTCACGTTTATGGACGAACAGAACGTAAACGTA TAGGTCAACGCAACTTCCACTGCATCGGAACGCCCCAAAGCCTGCTTCTGGTCGCCTCTCTCCACCGGTTCAGGATCGGC CACTGTGCTCACCCCCTCCTACCGCATCAGGCCACCCTGGCACAGCTCTTCAGCCGCCTCGTACCCATCGGTTCAGGAGC GGCCACTGTGTTCACCCCTTTCCTGTCGCAGCGGAATGCCCTGGCACAGCTCTTCAGCCGCCTCGCATCCACCGGTTCAG GAGCGGCCATCTGTGCCTTCCCCTACCGCATCAGTCCACCCTGGCACAGCTCTTCAACTGCCTCGCACCCATCGGTTCAG GAGCGGCCACTGTGCTCACCACCTCTCCTACCGCATCAGGACGCCCTGACCCGGGTCTTCAGCCCCCTGCCCGCCGGTTC AGGAGCGGCGACGGCACTTACCCCCTCCTGCCACAGCCGGATGCCCCGGCACAGCTCTTTAGTCTCCTCTCACCCACCGG TTCAGGAGCGGCACCGGCGCTCACCACCTCTCCTACCGCATCAGGACGACCTGGCACAGCTCTTCAGCCGCCTCGCACCC ATCGGTTCAGGAGCGGCACCTGCCCCCCTCCTGCCGCAGCCGGATGCCCTGGCACTGGTCTTCAATATCCTCTCGCCCAC CGGCTTAGGAGCGGCACCGGCGCTCACCCCTTTCCTGTCGCAGCCGGATGCCCTGGCACTGGTCTTCAATATCCCCTTGC CCACCGGTTCAGGAGCAGCCACCTGCGCTCACCCCCTCCTGCCGCAGCCGGACGCCCTGGTACAGGTTTCCAGCCTCCTC TCGCCCACCGGCTTAGGAGCGGCACCGGCGCTCACCCCTTTCCTGTCGCAGCCGGATGCCCTGGCACAGCTCTTCAGCCG CCTCGCACCCATCGGTTCAGGAGCGGCACCTGCCCCCCTCCTGCCGCAGCCGGATGCCCTGGCACCGGTCTTCAGCACCT CTCTTCCGCTGATACAGGAGCGGCACCTGCCCCCCTCCTGCCGCAGCCGGATGCCCCGGCGCAGCTCTTTAGTCGCCTCT CACCCGCCGGTTCAGGAGCGGCCATCCGCGCCATCTCCTACCGCATCAGGACGCCCTGACACAGGTTTCCGGCCTCCTCT CACCCACCGGTTCAGGATCGGCACTGGTGCTCACCTCCCTCCTACCGCATCAGGACACCCCGGCACAGCTCTTTAG
Upstream 100 bases:
>100_bases CAGCTCCTCGGCAACTGTCGCCCCATCCTCCCCGCCGAGTACCGATTGACCGGGAATATCCCAATTCGCGTACATGCCAC GTCCCCTCCACTGGACTGTG
Downstream 100 bases:
>100_bases TCGCCTCTCACCCACCGGTTCAGGATCGGCCACTGTGCTCACCCCCTCCTGCCGCAGCCGGATACCCTGGCACCGGTCTT CAACATCCCCTTGCCCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MVMVIDVISDRRQHRCACSRPGYRQQCSANHKRVSTALTPTTVHVYGRTERKRIGQRNFHCIGTPQSLLLVASLHRFRIG HCAHPLLPHQATLAQLFSRLVPIGSGAATVFTPFLSQRNALAQLFSRLASTGSGAAICAFPYRISPPWHSSSTASHPSVQ ERPLCSPPLLPHQDALTRVFSPLPAGSGAATALTPSCHSRMPRHSSLVSSHPPVQERHRRSPPLLPHQDDLAQLFSRLAP IGSGAAPAPLLPQPDALALVFNILSPTGLGAAPALTPFLSQPDALALVFNIPLPTGSGAATCAHPLLPQPDALVQVSSLL SPTGLGAAPALTPFLSQPDALAQLFSRLAPIGSGAAPAPLLPQPDALAPVFSTSLPLIQERHLPPSCRSRMPRRSSLVAS HPPVQERPSAPSPTASGRPDTGFRPPLTHRFRIGTGAHLPPTASGHPGTAL
Sequences:
>Translated_451_residues MVMVIDVISDRRQHRCACSRPGYRQQCSANHKRVSTALTPTTVHVYGRTERKRIGQRNFHCIGTPQSLLLVASLHRFRIG HCAHPLLPHQATLAQLFSRLVPIGSGAATVFTPFLSQRNALAQLFSRLASTGSGAAICAFPYRISPPWHSSSTASHPSVQ ERPLCSPPLLPHQDALTRVFSPLPAGSGAATALTPSCHSRMPRHSSLVSSHPPVQERHRRSPPLLPHQDDLAQLFSRLAP IGSGAAPAPLLPQPDALALVFNILSPTGLGAAPALTPFLSQPDALALVFNIPLPTGSGAATCAHPLLPQPDALVQVSSLL SPTGLGAAPALTPFLSQPDALAQLFSRLAPIGSGAAPAPLLPQPDALAPVFSTSLPLIQERHLPPSCRSRMPRRSSLVAS HPPVQERPSAPSPTASGRPDTGFRPPLTHRFRIGTGAHLPPTASGHPGTAL >Mature_451_residues MVMVIDVISDRRQHRCACSRPGYRQQCSANHKRVSTALTPTTVHVYGRTERKRIGQRNFHCIGTPQSLLLVASLHRFRIG HCAHPLLPHQATLAQLFSRLVPIGSGAATVFTPFLSQRNALAQLFSRLASTGSGAAICAFPYRISPPWHSSSTASHPSVQ ERPLCSPPLLPHQDALTRVFSPLPAGSGAATALTPSCHSRMPRHSSLVSSHPPVQERHRRSPPLLPHQDDLAQLFSRLAP IGSGAAPAPLLPQPDALALVFNILSPTGLGAAPALTPFLSQPDALALVFNIPLPTGSGAATCAHPLLPQPDALVQVSSLL SPTGLGAAPALTPFLSQPDALAQLFSRLAPIGSGAAPAPLLPQPDALAPVFSTSLPLIQERHLPPSCRSRMPRRSSLVAS HPPVQERPSAPSPTASGRPDTGFRPPLTHRFRIGTGAHLPPTASGHPGTAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47632; Mature: 47632
Theoretical pI: Translated: 11.75; Mature: 11.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMVIDVISDRRQHRCACSRPGYRQQCSANHKRVSTALTPTTVHVYGRTERKRIGQRNFH CEEEEEEHHCHHHHHHHCCCCCCHHHHCCCHHHHHEECCCEEEEEECCHHHHHHCCCCCE CIGTPQSLLLVASLHRFRIGHCAHPLLPHQATLAQLFSRLVPIGSGAATVFTPFLSQRNA EECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LAQLFSRLASTGSGAAICAFPYRISPPWHSSSTASHPSVQERPLCSPPLLPHQDALTRVF HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH SPLPAGSGAATALTPSCHSRMPRHSSLVSSHPPVQERHRRSPPLLPHQDDLAQLFSRLAP HCCCCCCCCCEEECCHHHHCCCCHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCC IGSGAAPAPLLPQPDALALVFNILSPTGLGAAPALTPFLSQPDALALVFNIPLPTGSGAA CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCH TCAHPLLPQPDALVQVSSLLSPTGLGAAPALTPFLSQPDALAQLFSRLAPIGSGAAPAPL HHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC LPQPDALAPVFSTSLPLIQERHLPPSCRSRMPRRSSLVASHPPVQERPSAPSPTASGRPD CCCCCCCCHHHHCCCCHHHHCCCCHHHHHCCCHHHHHCCCCCCHHCCCCCCCCCCCCCCC TGFRPPLTHRFRIGTGAHLPPTASGHPGTAL CCCCCCCCCEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVMVIDVISDRRQHRCACSRPGYRQQCSANHKRVSTALTPTTVHVYGRTERKRIGQRNFH CEEEEEEHHCHHHHHHHCCCCCCHHHHCCCHHHHHEECCCEEEEEECCHHHHHHCCCCCE CIGTPQSLLLVASLHRFRIGHCAHPLLPHQATLAQLFSRLVPIGSGAATVFTPFLSQRNA EECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LAQLFSRLASTGSGAAICAFPYRISPPWHSSSTASHPSVQERPLCSPPLLPHQDALTRVF HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH SPLPAGSGAATALTPSCHSRMPRHSSLVSSHPPVQERHRRSPPLLPHQDDLAQLFSRLAP HCCCCCCCCCEEECCHHHHCCCCHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCC IGSGAAPAPLLPQPDALALVFNILSPTGLGAAPALTPFLSQPDALALVFNIPLPTGSGAA CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCH TCAHPLLPQPDALVQVSSLLSPTGLGAAPALTPFLSQPDALAQLFSRLAPIGSGAAPAPL HHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC LPQPDALAPVFSTSLPLIQERHLPPSCRSRMPRRSSLVASHPPVQERPSAPSPTASGRPD CCCCCCCCHHHHCCCCHHHHCCCCHHHHHCCCHHHHHCCCCCCHHCCCCCCCCCCCCCCC TGFRPPLTHRFRIGTGAHLPPTASGHPGTAL CCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA