| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524261
Identifier: 222524261
GI number: 222524261
Start: 1258364
End: 1258840
Strand: Direct
Name: 222524261
Synonym: Chy400_0984
Alternate gene names: NA
Gene position: 1258364-1258840 (Clockwise)
Preceding gene: 222524252
Following gene: 222524267
Centisome position: 23.88
GC content: 63.1
Gene sequence:
>477_bases ATGGAGGGGCCGGTTCTGAACCCGGGACGGGTTGTGCATCCGCCCCAACTCCAGGGAGCGACGTTGGCCGACACATGCGT AGGGGCGACGCATGCGTCGCCCCTACTGAATGATGCACCGCTGGACACCTGTAGGGACACGGCATGCCGTGCCCTCTGGA TTTTGGCCCTTGTTCCACCTCCCCCCTATACATTACCCATAACTATTTTGTCAACTTCTTCGCTCACTCGCAGCGTCTAC CTCATCGTGCGCGATCCTGGGCACTATTCGCGTTACACTGCTGTCGCGTGGGTCTCACGTCACGAACGGGAAGTGGATGG GAGCAGTGGTGGCGGCGGTAGACGGTGTATCAAACCGTGGGGCAGGCTTCCAGCCGGCCAGCGGGGCCAGCACCTGCCTG CGATGGCGATGATGCCTGCACGCGGGCTGGAAGCCCGCGCCACGGGGAGCGCGTGCAGTCTACCTGACGCAGCGTGA
Upstream 100 bases:
>100_bases ACCTGCCTGCGATGGCGATGATGCCTGCACGCAGACTGGAAGCCCGCGCCACGGGGAGCGCGTGCAGTCTGCCTGACGCG GCGTGACGTGTGGATAATGC
Downstream 100 bases:
>100_bases CGTGTGGGTAATGCATAGCGGTGGCGGGCTGGAGTGGGGGCGTGTCGCCGAACACCACTGCGCACCACGCCCCAGCCACA CCCACCCCCACCCCCTGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MEGPVLNPGRVVHPPQLQGATLADTCVGATHASPLLNDAPLDTCRDTACRALWILALVPPPPYTLPITILSTSSLTRSVY LIVRDPGHYSRYTAVAWVSRHEREVDGSSGGGGRRCIKPWGRLPAGQRGQHLPAMAMMPARGLEARATGSACSLPDAA
Sequences:
>Translated_158_residues MEGPVLNPGRVVHPPQLQGATLADTCVGATHASPLLNDAPLDTCRDTACRALWILALVPPPPYTLPITILSTSSLTRSVY LIVRDPGHYSRYTAVAWVSRHEREVDGSSGGGGRRCIKPWGRLPAGQRGQHLPAMAMMPARGLEARATGSACSLPDAA >Mature_158_residues MEGPVLNPGRVVHPPQLQGATLADTCVGATHASPLLNDAPLDTCRDTACRALWILALVPPPPYTLPITILSTSSLTRSVY LIVRDPGHYSRYTAVAWVSRHEREVDGSSGGGGRRCIKPWGRLPAGQRGQHLPAMAMMPARGLEARATGSACSLPDAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16741; Mature: 16741
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGPVLNPGRVVHPPQLQGATLADTCVGATHASPLLNDAPLDTCRDTACRALWILALVPP CCCCCCCCCEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHEEEEEEECCC PPYTLPITILSTSSLTRSVYLIVRDPGHYSRYTAVAWVSRHEREVDGSSGGGGRRCIKPW CCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH GRLPAGQRGQHLPAMAMMPARGLEARATGSACSLPDAA HCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEGPVLNPGRVVHPPQLQGATLADTCVGATHASPLLNDAPLDTCRDTACRALWILALVPP CCCCCCCCCEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHEEEEEEECCC PPYTLPITILSTSSLTRSVYLIVRDPGHYSRYTAVAWVSRHEREVDGSSGGGGRRCIKPW CCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH GRLPAGQRGQHLPAMAMMPARGLEARATGSACSLPDAA HCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA