| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524240
Identifier: 222524240
GI number: 222524240
Start: 1227964
End: 1229211
Strand: Direct
Name: 222524240
Synonym: Chy400_0962
Alternate gene names: NA
Gene position: 1227964-1229211 (Clockwise)
Preceding gene: 222524239
Following gene: 222524241
Centisome position: 23.31
GC content: 60.82
Gene sequence:
>1248_bases GTGATTGATATTACGCAGAGCCAGATGCCGATGCCGATTGCCGAAGCCGATGTGCCGCTGGTTTTGCGCGCACTCGATGT CTTGCAAGACCCGGCATATCCCCACCCCTGGACAGCCGCCCAGGAGACGGCATTTATGTTTAGTCAGGCAGAGCAGGATC GGCTCCGTGAACTCAATTTTTGGGATGAAGATAATCGGGCACCGGTTGATTTGCCACGACGGGTCGGGCGACGGCTCTTT CGCGCACTCACGCACGATAAGCGTGGTGCCGAGGCGTTGAAGATTGTGCGAGCCTACGCCCTGGCTGTTGATCGACCGCT CCTGATTTCTTGCCACTTTCACGCTCACGCACCAGCCGATGTCGCACTGGCTGCGTTGCCCTGGGAATTGCTCTGGGCTG ATGAACCAACGCCACTGTTGACGGAGCGTCGCCTGGCGGCGACGATTGAACGACGGTTGAAGCATACCGGTCCTCCACCT GCACCAACCCCAGGGCGTGGTGCGCTGCGGATTCTCGCGCTCTCACCACAGGCCGGTATTCCGATGGAACTCCGCCAAAT CGAGCGGAGTGCGCGTATGCACGCCCTGCAACCTCTGCTCGAACGGAATCTGGCCGAGGTTCGCGAGCTGAGTCCCGTTT CCCGCCGGGAGCTGGAACGTGTCGTCCGCGAATGGTCTCCTGATGTCATTCACTACTACGGCCACGGTCGCTATGAGCAG GGGAGCGGGGCACTGCTGCTTGACCACGAACGTGGTGGCGAGGAATGGACGCCACCAGATGCGCTTGCGGCTGCATTTGG CGGTGTGCAGATGGTTGTGCTCCACGCCTGTCAGGGCGCTATGGCAACCCCAGGCGCAACCCTGCTCAGTAGCGTCGCAC CGGCACTGAGTATGGCCGGCGTGCCGGTGGTGATTGGGATGCAGTTTACGATTCGGGCCGACGCCGCTACCCGCATCGCC AGTATTGTGTACGCCGGTCTGGCCCAGGGACGGAGTGTTCAGGAAGCGTTGGCAGCTGCCCGCATTGCCCTGTATGTCGG TGAAACCGATCAGGTGTCGTGGTTTGTGCCGGCCCTCTATGTGCGTAGTCGCAGCCACGGTCCAATCTACCTGCGCCCAC CCACCGACCAGCCACCGGTTCTTACGCTTGGCCCATCGTTATCATCGCAGCCTCGCCATCCACATATCCGGCGTTTACGC ATTCAAGAGGAATGGGCACGTCAGCGTTTGCAAGCAGATCGGCAGTAA
Upstream 100 bases:
>100_bases ACCGGCAAACGCTATGCGATCAACATACCAGCCCGTCCTGCTGTCTATCGATTTCAGTTCGTACCAACGTGGTTTCTTCG TGCGTTGGGAGTCTAACGAA
Downstream 100 bases:
>100_bases GGGAATCTGCCGGCGCTGTTGAACATATATCAGGTGAGTCATGTATCAGATTGAATGGCTAGGAATGACGCGCAACAATT TCAAGCCCGGCACCCCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MIDITQSQMPMPIAEADVPLVLRALDVLQDPAYPHPWTAAQETAFMFSQAEQDRLRELNFWDEDNRAPVDLPRRVGRRLF RALTHDKRGAEALKIVRAYALAVDRPLLISCHFHAHAPADVALAALPWELLWADEPTPLLTERRLAATIERRLKHTGPPP APTPGRGALRILALSPQAGIPMELRQIERSARMHALQPLLERNLAEVRELSPVSRRELERVVREWSPDVIHYYGHGRYEQ GSGALLLDHERGGEEWTPPDALAAAFGGVQMVVLHACQGAMATPGATLLSSVAPALSMAGVPVVIGMQFTIRADAATRIA SIVYAGLAQGRSVQEALAAARIALYVGETDQVSWFVPALYVRSRSHGPIYLRPPTDQPPVLTLGPSLSSQPRHPHIRRLR IQEEWARQRLQADRQ
Sequences:
>Translated_415_residues MIDITQSQMPMPIAEADVPLVLRALDVLQDPAYPHPWTAAQETAFMFSQAEQDRLRELNFWDEDNRAPVDLPRRVGRRLF RALTHDKRGAEALKIVRAYALAVDRPLLISCHFHAHAPADVALAALPWELLWADEPTPLLTERRLAATIERRLKHTGPPP APTPGRGALRILALSPQAGIPMELRQIERSARMHALQPLLERNLAEVRELSPVSRRELERVVREWSPDVIHYYGHGRYEQ GSGALLLDHERGGEEWTPPDALAAAFGGVQMVVLHACQGAMATPGATLLSSVAPALSMAGVPVVIGMQFTIRADAATRIA SIVYAGLAQGRSVQEALAAARIALYVGETDQVSWFVPALYVRSRSHGPIYLRPPTDQPPVLTLGPSLSSQPRHPHIRRLR IQEEWARQRLQADRQ >Mature_415_residues MIDITQSQMPMPIAEADVPLVLRALDVLQDPAYPHPWTAAQETAFMFSQAEQDRLRELNFWDEDNRAPVDLPRRVGRRLF RALTHDKRGAEALKIVRAYALAVDRPLLISCHFHAHAPADVALAALPWELLWADEPTPLLTERRLAATIERRLKHTGPPP APTPGRGALRILALSPQAGIPMELRQIERSARMHALQPLLERNLAEVRELSPVSRRELERVVREWSPDVIHYYGHGRYEQ GSGALLLDHERGGEEWTPPDALAAAFGGVQMVVLHACQGAMATPGATLLSSVAPALSMAGVPVVIGMQFTIRADAATRIA SIVYAGLAQGRSVQEALAAARIALYVGETDQVSWFVPALYVRSRSHGPIYLRPPTDQPPVLTLGPSLSSQPRHPHIRRLR IQEEWARQRLQADRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46074; Mature: 46074
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDITQSQMPMPIAEADVPLVLRALDVLQDPAYPHPWTAAQETAFMFSQAEQDRLRELNF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC WDEDNRAPVDLPRRVGRRLFRALTHDKRGAEALKIVRAYALAVDRPLLISCHFHAHAPAD CCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHH VALAALPWELLWADEPTPLLTERRLAATIERRLKHTGPPPAPTPGRGALRILALSPQAGI HHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCC PMELRQIERSARMHALQPLLERNLAEVRELSPVSRRELERVVREWSPDVIHYYGHGRYEQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCEEC GSGALLLDHERGGEEWTPPDALAAAFGGVQMVVLHACQGAMATPGATLLSSVAPALSMAG CCCCEEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC VPVVIGMQFTIRADAATRIASIVYAGLAQGRSVQEALAAARIALYVGETDQVSWFVPALY CCEEEEEEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHH VRSRSHGPIYLRPPTDQPPVLTLGPSLSSQPRHPHIRRLRIQEEWARQRLQADRQ HHCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIDITQSQMPMPIAEADVPLVLRALDVLQDPAYPHPWTAAQETAFMFSQAEQDRLRELNF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC WDEDNRAPVDLPRRVGRRLFRALTHDKRGAEALKIVRAYALAVDRPLLISCHFHAHAPAD CCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHH VALAALPWELLWADEPTPLLTERRLAATIERRLKHTGPPPAPTPGRGALRILALSPQAGI HHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCC PMELRQIERSARMHALQPLLERNLAEVRELSPVSRRELERVVREWSPDVIHYYGHGRYEQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCEEC GSGALLLDHERGGEEWTPPDALAAAFGGVQMVVLHACQGAMATPGATLLSSVAPALSMAG CCCCEEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC VPVVIGMQFTIRADAATRIASIVYAGLAQGRSVQEALAAARIALYVGETDQVSWFVPALY CCEEEEEEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHH VRSRSHGPIYLRPPTDQPPVLTLGPSLSSQPRHPHIRRLRIQEEWARQRLQADRQ HHCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA