| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524003
Identifier: 222524003
GI number: 222524003
Start: 900379
End: 902247
Strand: Direct
Name: 222524003
Synonym: Chy400_0718
Alternate gene names: NA
Gene position: 900379-902247 (Clockwise)
Preceding gene: 222523999
Following gene: 222524011
Centisome position: 17.09
GC content: 59.71
Gene sequence:
>1869_bases ATGATGTGGCATGCTATCACAATACAACCGGCAAAGACAAATAGCGGCAGGCAGCAAACCATCCTCTTGTCGTCGGCCCA TGGCGGCGAGAAACGTTCAGCAGGTACACGTACCTTCACGTTCAAGGACAGCACCGGTGTTGATGGGTGGTACCGCGTCT CGCAGTGTGCTGTAGTCCACCCCTGCCGGGGGCGGAAACCGGCGGTGCGGTATGGCTCGCTGTCGCGCACCGGTTCTGGC CTGCAATACCTCGCGAGATGCGGGTACGGTGTGCTGTTGCGGGTAGGGAGTGCGCCGGCGGCGCATGCTCCCAGGCTTTG GCGTTTCACCATCCCTGCCAGGCTGTGGTATGATGCCTTTATGATACGACTATTGCTTCTGATTATCATTGCATTTGGTA GCGTCACCCCGTTCTTCCCCGGTGCCGTCTTCCGCGACGATCCGCCGGCGGCTACGACCATCGTTGATCCCTTCATCACG GCCCAAACGGCGGCGATGCGGGCCGAGCATGCTGCCGACCTTACCGATGCAGATTGGGATCGTTACACCCTCACGGTGCA GCTTGATCCAACCGGCCCCCGCTTGAGCGGTGCAGTCAGTGTTCGCCTGACCAATCGCAGCGAGGTGGATTTCGATACCA TCTGGTTTCATCTCTACCCCAACCACCCTGATTTTGGTGGACGACTCGATGTGACTTCGGCGCAGATCGATGGGGTACCG GTGCCATCACGCACCTTACACGGCGACACCCTGATTGGCTTGCGCGCACCGCAACCGCTTCCCCCCGGCCAGAGCGCAAC GGTCACCATGACCTTCACGGCCCGCACACCCCGCAACGCCAGTCAACGCATCTTCGGCGCGTACAATCTGGAGGCCGGGG TCTGGTCGATTGCCTCGTTCTATCCGCTGCTGGCCCGCTACATCCCCGGTATGGGCTGGGATACCCGACCAATCGTGTCA CGCGGTGATTTTACCGTCAGCGCAACTGCGCTCTACGACGTTACGGTTGATGCACCCGCCGACTGGCATCTGGTCAGTAG CGGGAGTCGGATTGAGCACCGTACCACAGATCACAACCGCCAGGTAGCCCGATTTGTCAGTGGGCCGATGCGAGAATTCT ATCTGGCGGCACTCCAGGGTCTCATGCCGATCAGCACTGAAATAGACGGCATACGGGTGATCAGCTACGTGCAACCGAAC GATCAGACCGCCGGTAAGCAGAGTCTGACGATTGCCACCACAGCCTTGCAGGTCTTCAACCAGCGTTTCGGGGCATACCC GTACAACGAGTTTGAAGTTATCCAGGCGGCACTGACTCAGTTTTACGGCATGGAGTATCCCGGTGTAGTGCTGATCGAGC AAGACCTGTACCGACGCAACGACCGCTTACTGGAGACGACCATCGCCCATGAAATCAGCCACCAGTGGTGGTACGGGCTG ATTGGGAACGACGCCCAGGGCGAGGCGTGGCTTGACGAAGGGTTGGCGAGTTACAGCCAGATACTCTACTACGAGATGAT CGACAACCCTGCCCAGGCCACAGCCGAACTCGAAGCCTTCCGCGCCAGCTACCGCCGATTGCGCGAGCGGGGCGGCGATG CGCCACTGGCTACTCCCCCGGCGGCGCTCAATAATGGGCGTTACGTCCCGATTGCCTATGCGAAAGGAGCGCTCTTTTTT CACGCACTCCGCCAACGCATTGGCGAAGCTGCCTTCAACGACTTTCTCCAACAATACGTCGCTACGTATCGCTGGCGGGA AATCGCCGGCCCTGATCTGATCCGTATCGCCGGTCAGGCGTGTGGATGTGACCTGGATGATCTATTCACGGATTGGGTGC TCACCGCTACCGCCGTGCCGATCCCCTAA
Upstream 100 bases:
>100_bases ATCTCCTGGCCCAACCGGTGAGAAGTTTGCCGGCTATCGGTAACCGATGGCGAATCTTTGCCTCCAGGGTAACAAACGCT GCCACGGAGACGGTGGGTAG
Downstream 100 bases:
>100_bases TCACGCCGGGTATATGGTAGAGAGTGTTACCGGCAGATCCAAGCCAACGGGTACCGTTCGACGCCAATCACACCTGATCG CGACGGGAACTGCACGCTGG
Product: peptidase M1 membrane alanine aminopeptidase
Products: NA
Alternate protein names: Metallopeptidase; Aminopeptidase N; Aminopeptidase; Zn-Dependent Aminopeptidase; Peptidase M; M1 Family Aminopeptidase; Zinc Metalloprotease Membrane Protein; Aminopeptidase N-Like Protein; Peptidase; Peptidase M1 Family Protein; Protease; Peptidase M1 Membrane Alanine Aminopeptidase-Like Protein; Aminopepetidase; Leukotriene A4 Hydrolase; Epsilon-Poly-L-Lysine-Degrading; M1 Family Peptidase; Glutamyl Aminopeptidase; Exported Aminopeptidase; Aminopeptidase M1 Family; Secreted Aminopeptidase; Peptidase Family M1 Protein; Zinc Metalloprotease; Peptidase M1 Superfamily Peptidase
Number of amino acids: Translated: 622; Mature: 622
Protein sequence:
>622_residues MMWHAITIQPAKTNSGRQQTILLSSAHGGEKRSAGTRTFTFKDSTGVDGWYRVSQCAVVHPCRGRKPAVRYGSLSRTGSG LQYLARCGYGVLLRVGSAPAAHAPRLWRFTIPARLWYDAFMIRLLLLIIIAFGSVTPFFPGAVFRDDPPAATTIVDPFIT AQTAAMRAEHAADLTDADWDRYTLTVQLDPTGPRLSGAVSVRLTNRSEVDFDTIWFHLYPNHPDFGGRLDVTSAQIDGVP VPSRTLHGDTLIGLRAPQPLPPGQSATVTMTFTARTPRNASQRIFGAYNLEAGVWSIASFYPLLARYIPGMGWDTRPIVS RGDFTVSATALYDVTVDAPADWHLVSSGSRIEHRTTDHNRQVARFVSGPMREFYLAALQGLMPISTEIDGIRVISYVQPN DQTAGKQSLTIATTALQVFNQRFGAYPYNEFEVIQAALTQFYGMEYPGVVLIEQDLYRRNDRLLETTIAHEISHQWWYGL IGNDAQGEAWLDEGLASYSQILYYEMIDNPAQATAELEAFRASYRRLRERGGDAPLATPPAALNNGRYVPIAYAKGALFF HALRQRIGEAAFNDFLQQYVATYRWREIAGPDLIRIAGQACGCDLDDLFTDWVLTATAVPIP
Sequences:
>Translated_622_residues MMWHAITIQPAKTNSGRQQTILLSSAHGGEKRSAGTRTFTFKDSTGVDGWYRVSQCAVVHPCRGRKPAVRYGSLSRTGSG LQYLARCGYGVLLRVGSAPAAHAPRLWRFTIPARLWYDAFMIRLLLLIIIAFGSVTPFFPGAVFRDDPPAATTIVDPFIT AQTAAMRAEHAADLTDADWDRYTLTVQLDPTGPRLSGAVSVRLTNRSEVDFDTIWFHLYPNHPDFGGRLDVTSAQIDGVP VPSRTLHGDTLIGLRAPQPLPPGQSATVTMTFTARTPRNASQRIFGAYNLEAGVWSIASFYPLLARYIPGMGWDTRPIVS RGDFTVSATALYDVTVDAPADWHLVSSGSRIEHRTTDHNRQVARFVSGPMREFYLAALQGLMPISTEIDGIRVISYVQPN DQTAGKQSLTIATTALQVFNQRFGAYPYNEFEVIQAALTQFYGMEYPGVVLIEQDLYRRNDRLLETTIAHEISHQWWYGL IGNDAQGEAWLDEGLASYSQILYYEMIDNPAQATAELEAFRASYRRLRERGGDAPLATPPAALNNGRYVPIAYAKGALFF HALRQRIGEAAFNDFLQQYVATYRWREIAGPDLIRIAGQACGCDLDDLFTDWVLTATAVPIP >Mature_622_residues MMWHAITIQPAKTNSGRQQTILLSSAHGGEKRSAGTRTFTFKDSTGVDGWYRVSQCAVVHPCRGRKPAVRYGSLSRTGSG LQYLARCGYGVLLRVGSAPAAHAPRLWRFTIPARLWYDAFMIRLLLLIIIAFGSVTPFFPGAVFRDDPPAATTIVDPFIT AQTAAMRAEHAADLTDADWDRYTLTVQLDPTGPRLSGAVSVRLTNRSEVDFDTIWFHLYPNHPDFGGRLDVTSAQIDGVP VPSRTLHGDTLIGLRAPQPLPPGQSATVTMTFTARTPRNASQRIFGAYNLEAGVWSIASFYPLLARYIPGMGWDTRPIVS RGDFTVSATALYDVTVDAPADWHLVSSGSRIEHRTTDHNRQVARFVSGPMREFYLAALQGLMPISTEIDGIRVISYVQPN DQTAGKQSLTIATTALQVFNQRFGAYPYNEFEVIQAALTQFYGMEYPGVVLIEQDLYRRNDRLLETTIAHEISHQWWYGL IGNDAQGEAWLDEGLASYSQILYYEMIDNPAQATAELEAFRASYRRLRERGGDAPLATPPAALNNGRYVPIAYAKGALFF HALRQRIGEAAFNDFLQQYVATYRWREIAGPDLIRIAGQACGCDLDDLFTDWVLTATAVPIP
Specific function: Unknown
COG id: COG0308
COG function: function code E; Aminopeptidase N
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI40316915, Length=272, Percent_Identity=26.1029411764706, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI54020718, Length=195, Percent_Identity=28.7179487179487, Blast_Score=69, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17569221, Length=310, Percent_Identity=23.5483870967742, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI24655257, Length=309, Percent_Identity=22.6537216828479, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24655274, Length=309, Percent_Identity=22.6537216828479, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24655260, Length=309, Percent_Identity=22.6537216828479, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24655265, Length=309, Percent_Identity=22.6537216828479, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24655268, Length=309, Percent_Identity=22.6537216828479, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24655252, Length=309, Percent_Identity=22.6537216828479, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68999; Mature: 68999
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMWHAITIQPAKTNSGRQQTILLSSAHGGEKRSAGTRTFTFKDSTGVDGWYRVSQCAVVH CCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEECCCEEEEC PCRGRKPAVRYGSLSRTGSGLQYLARCGYGVLLRVGSAPAAHAPRLWRFTIPARLWYDAF CCCCCCCCEECCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCHHHHHHHH MIRLLLLIIIAFGSVTPFFPGAVFRDDPPAATTIVDPFITAQTAAMRAEHAADLTDADWD HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCC RYTLTVQLDPTGPRLSGAVSVRLTNRSEVDFDTIWFHLYPNHPDFGGRLDVTSAQIDGVP EEEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCEEEEEECEECCCC VPSRTLHGDTLIGLRAPQPLPPGQSATVTMTFTARTPRNASQRIFGAYNLEAGVWSIASF CCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCHHHHHHHH YPLLARYIPGMGWDTRPIVSRGDFTVSATALYDVTVDAPADWHLVSSGSRIEHRTTDHNR HHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCHH QVARFVSGPMREFYLAALQGLMPISTEIDGIRVISYVQPNDQTAGKQSLTIATTALQVFN HHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEHHHHHHHHHH QRFGAYPYNEFEVIQAALTQFYGMEYPGVVLIEQDLYRRNDRLLETTIAHEISHQWWYGL HHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEECHHHHHCCCHHHHHHHHHHHCCCEEEEE IGNDAQGEAWLDEGLASYSQILYYEMIDNPAQATAELEAFRASYRRLRERGGDAPLATPP CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AALNNGRYVPIAYAKGALFFHALRQRIGEAAFNDFLQQYVATYRWREIAGPDLIRIAGQA CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHH CGCDLDDLFTDWVLTATAVPIP CCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MMWHAITIQPAKTNSGRQQTILLSSAHGGEKRSAGTRTFTFKDSTGVDGWYRVSQCAVVH CCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEECCCEEEEC PCRGRKPAVRYGSLSRTGSGLQYLARCGYGVLLRVGSAPAAHAPRLWRFTIPARLWYDAF CCCCCCCCEECCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCHHHHHHHH MIRLLLLIIIAFGSVTPFFPGAVFRDDPPAATTIVDPFITAQTAAMRAEHAADLTDADWD HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCC RYTLTVQLDPTGPRLSGAVSVRLTNRSEVDFDTIWFHLYPNHPDFGGRLDVTSAQIDGVP EEEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCEEEEEECEECCCC VPSRTLHGDTLIGLRAPQPLPPGQSATVTMTFTARTPRNASQRIFGAYNLEAGVWSIASF CCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCHHHHHHHH YPLLARYIPGMGWDTRPIVSRGDFTVSATALYDVTVDAPADWHLVSSGSRIEHRTTDHNR HHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCHH QVARFVSGPMREFYLAALQGLMPISTEIDGIRVISYVQPNDQTAGKQSLTIATTALQVFN HHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEHHHHHHHHHH QRFGAYPYNEFEVIQAALTQFYGMEYPGVVLIEQDLYRRNDRLLETTIAHEISHQWWYGL HHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEECHHHHHCCCHHHHHHHHHHHCCCEEEEE IGNDAQGEAWLDEGLASYSQILYYEMIDNPAQATAELEAFRASYRRLRERGGDAPLATPP CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AALNNGRYVPIAYAKGALFFHALRQRIGEAAFNDFLQQYVATYRWREIAGPDLIRIAGQA CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHH CGCDLDDLFTDWVLTATAVPIP CCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA