| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523864
Identifier: 222523864
GI number: 222523864
Start: 682976
End: 684019
Strand: Direct
Name: 222523864
Synonym: Chy400_0572
Alternate gene names: NA
Gene position: 682976-684019 (Clockwise)
Preceding gene: 222523863
Following gene: 222523865
Centisome position: 12.96
GC content: 54.12
Gene sequence:
>1044_bases GTGCGTCACTGGAAACTATGGCTCGGCCTGATCATTAGCATCTTTTTTCTGGGCATCGCCCTTTACGGTCTCGACCTGGC CCATTTTTGGGAAGCATTACGCGAGGCTAATTACTGGTGGTTAATTCCAGGTATCCTGGTTTACTTCATCACCGTTTGGG TGCGCACATGGCGCTGGCAATCGATGCTCAGCCATATGGCTCGCGTGCCATTACGTACCCTCTTCCCGATTGTGGTGATC GGCTACATGGGCAACAATGTCTACCCGGCGCGAGCCGGTGAAGTGTTGCGCAGTTATGTCTTGCGTCGCAATTGCGGGAT TGCCATGAGCGCTTCGCTGGCCACTGTCGTATTGGAACGCCTCTTCGACGGGTTGGTGATGCTGCTCTTTGTGGCGGTGA CGCTCCCATTTGCGCCATTGCCACCAGTGTTTCGGTCGCTGGTAATTGGGTTTAGCGCTTTATTCCTCTGCGCGTTTCTC GGTTTTGTTGTGCTGGCTGCTCGTCCCCAATTGATGAGTCGCTGGTACACCATGATCGTTGATCGCTTCGCTCCCGGCTG GCTGCGCCCACATATTCACGGCCTCTTTGATCGGTTTATTATCGGCCTGCAATCGCTGCGCAGTCCACGCGACATGATCA CGATTCTGCTCACTTCGACGTTCATCTGGCTGGGTGAGACGCTCAAATACTGGTTCGTGATGCATGCATTTCCGTTTGAA GTCTCGTTTCTGGTGTTGATGCTGATGACCGCGATTGTTAATCTCTTCACTACGATCCCTTCAACACCGGGATACATTGG CACGTTCGATGCACCGGGAATCGCAACTCTGACGCAGTTTGGTGTACCTCACGCTATCGCTGCCGGTTATACACTGGTGC TCCACGTTGCCCTGTGGTTGCCAATAACGCTCCTCGGCGCATGGTATATGCTCCGCCAAAGCCTGACCTGGCGTGATCTG GATCGCGCAGCAGCAATCCAGGCCCAATCTACGCCGAACGTCGAAACCAACGATACAGTCAATTCGCAGAAGGTGCTGCC ATGA
Upstream 100 bases:
>100_bases CTGTTGATCCTGGAACTTTGACATTCGGCAACAGCAAGGGTAATATGCAGAGAGATCGTCGGAGTACGACGCAGGTAGCA TTCACATCAAAGGAACATCG
Downstream 100 bases:
>100_bases GGATCGCGATTGTTGGTGCCGGCATTGCTGGTCTGAGTGCAGCCTACGATCTTGCCGGTCAGGGCTATGCGGTCACGATT TACGAAGCGGGGGATCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MRHWKLWLGLIISIFFLGIALYGLDLAHFWEALREANYWWLIPGILVYFITVWVRTWRWQSMLSHMARVPLRTLFPIVVI GYMGNNVYPARAGEVLRSYVLRRNCGIAMSASLATVVLERLFDGLVMLLFVAVTLPFAPLPPVFRSLVIGFSALFLCAFL GFVVLAARPQLMSRWYTMIVDRFAPGWLRPHIHGLFDRFIIGLQSLRSPRDMITILLTSTFIWLGETLKYWFVMHAFPFE VSFLVLMLMTAIVNLFTTIPSTPGYIGTFDAPGIATLTQFGVPHAIAAGYTLVLHVALWLPITLLGAWYMLRQSLTWRDL DRAAAIQAQSTPNVETNDTVNSQKVLP
Sequences:
>Translated_347_residues MRHWKLWLGLIISIFFLGIALYGLDLAHFWEALREANYWWLIPGILVYFITVWVRTWRWQSMLSHMARVPLRTLFPIVVI GYMGNNVYPARAGEVLRSYVLRRNCGIAMSASLATVVLERLFDGLVMLLFVAVTLPFAPLPPVFRSLVIGFSALFLCAFL GFVVLAARPQLMSRWYTMIVDRFAPGWLRPHIHGLFDRFIIGLQSLRSPRDMITILLTSTFIWLGETLKYWFVMHAFPFE VSFLVLMLMTAIVNLFTTIPSTPGYIGTFDAPGIATLTQFGVPHAIAAGYTLVLHVALWLPITLLGAWYMLRQSLTWRDL DRAAAIQAQSTPNVETNDTVNSQKVLP >Mature_347_residues MRHWKLWLGLIISIFFLGIALYGLDLAHFWEALREANYWWLIPGILVYFITVWVRTWRWQSMLSHMARVPLRTLFPIVVI GYMGNNVYPARAGEVLRSYVLRRNCGIAMSASLATVVLERLFDGLVMLLFVAVTLPFAPLPPVFRSLVIGFSALFLCAFL GFVVLAARPQLMSRWYTMIVDRFAPGWLRPHIHGLFDRFIIGLQSLRSPRDMITILLTSTFIWLGETLKYWFVMHAFPFE VSFLVLMLMTAIVNLFTTIPSTPGYIGTFDAPGIATLTQFGVPHAIAAGYTLVLHVALWLPITLLGAWYMLRQSLTWRDL DRAAAIQAQSTPNVETNDTVNSQKVLP
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0104 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022791 - InterPro: IPR005242 [H]
Pfam domain/function: PF03706 UPF0104 [H]
EC number: NA
Molecular weight: Translated: 39513; Mature: 39513
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHWKLWLGLIISIFFLGIALYGLDLAHFWEALREANYWWLIPGILVYFITVWVRTWRWQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHH SMLSHMARVPLRTLFPIVVIGYMGNNVYPARAGEVLRSYVLRRNCGIAMSASLATVVLER HHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LFDGLVMLLFVAVTLPFAPLPPVFRSLVIGFSALFLCAFLGFVVLAARPQLMSRWYTMIV HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH DRFAPGWLRPHIHGLFDRFIIGLQSLRSPRDMITILLTSTFIWLGETLKYWFVMHAFPFE HHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSFLVLMLMTAIVNLFTTIPSTPGYIGTFDAPGIATLTQFGVPHAIAAGYTLVLHVALWL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH PITLLGAWYMLRQSLTWRDLDRAAAIQAQSTPNVETNDTVNSQKVLP HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRHWKLWLGLIISIFFLGIALYGLDLAHFWEALREANYWWLIPGILVYFITVWVRTWRWQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHH SMLSHMARVPLRTLFPIVVIGYMGNNVYPARAGEVLRSYVLRRNCGIAMSASLATVVLER HHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LFDGLVMLLFVAVTLPFAPLPPVFRSLVIGFSALFLCAFLGFVVLAARPQLMSRWYTMIV HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH DRFAPGWLRPHIHGLFDRFIIGLQSLRSPRDMITILLTSTFIWLGETLKYWFVMHAFPFE HHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSFLVLMLMTAIVNLFTTIPSTPGYIGTFDAPGIATLTQFGVPHAIAAGYTLVLHVALWL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH PITLLGAWYMLRQSLTWRDLDRAAAIQAQSTPNVETNDTVNSQKVLP HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]