Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222523864

Identifier: 222523864

GI number: 222523864

Start: 682976

End: 684019

Strand: Direct

Name: 222523864

Synonym: Chy400_0572

Alternate gene names: NA

Gene position: 682976-684019 (Clockwise)

Preceding gene: 222523863

Following gene: 222523865

Centisome position: 12.96

GC content: 54.12

Gene sequence:

>1044_bases
GTGCGTCACTGGAAACTATGGCTCGGCCTGATCATTAGCATCTTTTTTCTGGGCATCGCCCTTTACGGTCTCGACCTGGC
CCATTTTTGGGAAGCATTACGCGAGGCTAATTACTGGTGGTTAATTCCAGGTATCCTGGTTTACTTCATCACCGTTTGGG
TGCGCACATGGCGCTGGCAATCGATGCTCAGCCATATGGCTCGCGTGCCATTACGTACCCTCTTCCCGATTGTGGTGATC
GGCTACATGGGCAACAATGTCTACCCGGCGCGAGCCGGTGAAGTGTTGCGCAGTTATGTCTTGCGTCGCAATTGCGGGAT
TGCCATGAGCGCTTCGCTGGCCACTGTCGTATTGGAACGCCTCTTCGACGGGTTGGTGATGCTGCTCTTTGTGGCGGTGA
CGCTCCCATTTGCGCCATTGCCACCAGTGTTTCGGTCGCTGGTAATTGGGTTTAGCGCTTTATTCCTCTGCGCGTTTCTC
GGTTTTGTTGTGCTGGCTGCTCGTCCCCAATTGATGAGTCGCTGGTACACCATGATCGTTGATCGCTTCGCTCCCGGCTG
GCTGCGCCCACATATTCACGGCCTCTTTGATCGGTTTATTATCGGCCTGCAATCGCTGCGCAGTCCACGCGACATGATCA
CGATTCTGCTCACTTCGACGTTCATCTGGCTGGGTGAGACGCTCAAATACTGGTTCGTGATGCATGCATTTCCGTTTGAA
GTCTCGTTTCTGGTGTTGATGCTGATGACCGCGATTGTTAATCTCTTCACTACGATCCCTTCAACACCGGGATACATTGG
CACGTTCGATGCACCGGGAATCGCAACTCTGACGCAGTTTGGTGTACCTCACGCTATCGCTGCCGGTTATACACTGGTGC
TCCACGTTGCCCTGTGGTTGCCAATAACGCTCCTCGGCGCATGGTATATGCTCCGCCAAAGCCTGACCTGGCGTGATCTG
GATCGCGCAGCAGCAATCCAGGCCCAATCTACGCCGAACGTCGAAACCAACGATACAGTCAATTCGCAGAAGGTGCTGCC
ATGA

Upstream 100 bases:

>100_bases
CTGTTGATCCTGGAACTTTGACATTCGGCAACAGCAAGGGTAATATGCAGAGAGATCGTCGGAGTACGACGCAGGTAGCA
TTCACATCAAAGGAACATCG

Downstream 100 bases:

>100_bases
GGATCGCGATTGTTGGTGCCGGCATTGCTGGTCTGAGTGCAGCCTACGATCTTGCCGGTCAGGGCTATGCGGTCACGATT
TACGAAGCGGGGGATCAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MRHWKLWLGLIISIFFLGIALYGLDLAHFWEALREANYWWLIPGILVYFITVWVRTWRWQSMLSHMARVPLRTLFPIVVI
GYMGNNVYPARAGEVLRSYVLRRNCGIAMSASLATVVLERLFDGLVMLLFVAVTLPFAPLPPVFRSLVIGFSALFLCAFL
GFVVLAARPQLMSRWYTMIVDRFAPGWLRPHIHGLFDRFIIGLQSLRSPRDMITILLTSTFIWLGETLKYWFVMHAFPFE
VSFLVLMLMTAIVNLFTTIPSTPGYIGTFDAPGIATLTQFGVPHAIAAGYTLVLHVALWLPITLLGAWYMLRQSLTWRDL
DRAAAIQAQSTPNVETNDTVNSQKVLP

Sequences:

>Translated_347_residues
MRHWKLWLGLIISIFFLGIALYGLDLAHFWEALREANYWWLIPGILVYFITVWVRTWRWQSMLSHMARVPLRTLFPIVVI
GYMGNNVYPARAGEVLRSYVLRRNCGIAMSASLATVVLERLFDGLVMLLFVAVTLPFAPLPPVFRSLVIGFSALFLCAFL
GFVVLAARPQLMSRWYTMIVDRFAPGWLRPHIHGLFDRFIIGLQSLRSPRDMITILLTSTFIWLGETLKYWFVMHAFPFE
VSFLVLMLMTAIVNLFTTIPSTPGYIGTFDAPGIATLTQFGVPHAIAAGYTLVLHVALWLPITLLGAWYMLRQSLTWRDL
DRAAAIQAQSTPNVETNDTVNSQKVLP
>Mature_347_residues
MRHWKLWLGLIISIFFLGIALYGLDLAHFWEALREANYWWLIPGILVYFITVWVRTWRWQSMLSHMARVPLRTLFPIVVI
GYMGNNVYPARAGEVLRSYVLRRNCGIAMSASLATVVLERLFDGLVMLLFVAVTLPFAPLPPVFRSLVIGFSALFLCAFL
GFVVLAARPQLMSRWYTMIVDRFAPGWLRPHIHGLFDRFIIGLQSLRSPRDMITILLTSTFIWLGETLKYWFVMHAFPFE
VSFLVLMLMTAIVNLFTTIPSTPGYIGTFDAPGIATLTQFGVPHAIAAGYTLVLHVALWLPITLLGAWYMLRQSLTWRDL
DRAAAIQAQSTPNVETNDTVNSQKVLP

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0104 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022791
- InterPro:   IPR005242 [H]

Pfam domain/function: PF03706 UPF0104 [H]

EC number: NA

Molecular weight: Translated: 39513; Mature: 39513

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHWKLWLGLIISIFFLGIALYGLDLAHFWEALREANYWWLIPGILVYFITVWVRTWRWQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHH
SMLSHMARVPLRTLFPIVVIGYMGNNVYPARAGEVLRSYVLRRNCGIAMSASLATVVLER
HHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LFDGLVMLLFVAVTLPFAPLPPVFRSLVIGFSALFLCAFLGFVVLAARPQLMSRWYTMIV
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
DRFAPGWLRPHIHGLFDRFIIGLQSLRSPRDMITILLTSTFIWLGETLKYWFVMHAFPFE
HHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSFLVLMLMTAIVNLFTTIPSTPGYIGTFDAPGIATLTQFGVPHAIAAGYTLVLHVALWL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH
PITLLGAWYMLRQSLTWRDLDRAAAIQAQSTPNVETNDTVNSQKVLP
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRHWKLWLGLIISIFFLGIALYGLDLAHFWEALREANYWWLIPGILVYFITVWVRTWRWQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHH
SMLSHMARVPLRTLFPIVVIGYMGNNVYPARAGEVLRSYVLRRNCGIAMSASLATVVLER
HHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LFDGLVMLLFVAVTLPFAPLPPVFRSLVIGFSALFLCAFLGFVVLAARPQLMSRWYTMIV
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
DRFAPGWLRPHIHGLFDRFIIGLQSLRSPRDMITILLTSTFIWLGETLKYWFVMHAFPFE
HHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSFLVLMLMTAIVNLFTTIPSTPGYIGTFDAPGIATLTQFGVPHAIAAGYTLVLHVALWL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH
PITLLGAWYMLRQSLTWRDLDRAAAIQAQSTPNVETNDTVNSQKVLP
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]