Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222523812

Identifier: 222523812

GI number: 222523812

Start: 621477

End: 621983

Strand: Direct

Name: 222523812

Synonym: Chy400_0520

Alternate gene names: NA

Gene position: 621477-621983 (Clockwise)

Preceding gene: 222523810

Following gene: 222523813

Centisome position: 11.8

GC content: 55.03

Gene sequence:

>507_bases
ATGCGTGCCTATCTTGATATTGAAACAACGTACAGCGGCACGATGAGCGTGATCGGAATCTACCGCCATGACAGGGGCGT
CATTCAGTTGGTCGGTGGTGGCATCCGTGATGTCGCGCTCTATGAGGCGCTCGAAGCCGTTTCGACTATCGTGACCTTCA
ACGGTAGTAGTTTCGATTTACCGGTAATCAAACGGCAATTACAGGCAGACCTGCGTGCTGAGTTCGCCCATCGCGATCTC
TTGCACGAATGCCGGCGCCGTGGACTACGTGGTGGGTTGAAGGGAGTAGAAGAAAGACTCGGCATTACCCGTGTTTCGTC
TGGCCTGACCGGTCGTGATGCGCCGCGCTTGTGGGAGCGATACGAGCAATATGCCGATCAACTGGCATTGCAAACCCTCC
TCGACTACAACCGTGATGACGTAGTCAATCTGGCTGTACTGGAAGCATTGCTCGATGCCGGCAATCCGCCTCTCGCCAAC
CCGGCGCGCTTTGTTAAACTATGGTAG

Upstream 100 bases:

>100_bases
CTGACAGGCAAGACGAGAGTCCGGCGGTTATAGTGTTCAATTGACGCTTTGCCGGGGGCGTGCCATAATTGAACACGAAT
TACGAGCAACAGGAGCTGGC

Downstream 100 bases:

>100_bases
ACAAACAGCGATATTATTGCATCACTCTCTGCAAAAACAATGCAACCACAACTACTTGACGGTCGTTATCAAATCGAACA
GCTCCTGGGCGAAGGCGGGA

Product: exonuclease-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MRAYLDIETTYSGTMSVIGIYRHDRGVIQLVGGGIRDVALYEALEAVSTIVTFNGSSFDLPVIKRQLQADLRAEFAHRDL
LHECRRRGLRGGLKGVEERLGITRVSSGLTGRDAPRLWERYEQYADQLALQTLLDYNRDDVVNLAVLEALLDAGNPPLAN
PARFVKLW

Sequences:

>Translated_168_residues
MRAYLDIETTYSGTMSVIGIYRHDRGVIQLVGGGIRDVALYEALEAVSTIVTFNGSSFDLPVIKRQLQADLRAEFAHRDL
LHECRRRGLRGGLKGVEERLGITRVSSGLTGRDAPRLWERYEQYADQLALQTLLDYNRDDVVNLAVLEALLDAGNPPLAN
PARFVKLW
>Mature_168_residues
MRAYLDIETTYSGTMSVIGIYRHDRGVIQLVGGGIRDVALYEALEAVSTIVTFNGSSFDLPVIKRQLQADLRAEFAHRDL
LHECRRRGLRGGLKGVEERLGITRVSSGLTGRDAPRLWERYEQYADQLALQTLLDYNRDDVVNLAVLEALLDAGNPPLAN
PARFVKLW

Specific function: Unknown

COG id: COG3359

COG function: function code L; Predicted exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18842; Mature: 18842

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAYLDIETTYSGTMSVIGIYRHDRGVIQLVGGGIRDVALYEALEAVSTIVTFNGSSFDL
CCEEEEEECCCCCHHHHEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCH
PVIKRQLQADLRAEFAHRDLLHECRRRGLRGGLKGVEERLGITRVSSGLTGRDAPRLWER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHCCCCCCCCCHHHHHH
YEQYADQLALQTLLDYNRDDVVNLAVLEALLDAGNPPLANPARFVKLW
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHEEECC
>Mature Secondary Structure
MRAYLDIETTYSGTMSVIGIYRHDRGVIQLVGGGIRDVALYEALEAVSTIVTFNGSSFDL
CCEEEEEECCCCCHHHHEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCH
PVIKRQLQADLRAEFAHRDLLHECRRRGLRGGLKGVEERLGITRVSSGLTGRDAPRLWER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHCCCCCCCCCHHHHHH
YEQYADQLALQTLLDYNRDDVVNLAVLEALLDAGNPPLANPARFVKLW
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA