| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is mviN [H]
Identifier: 222523810
GI number: 222523810
Start: 618573
End: 620126
Strand: Direct
Name: mviN [H]
Synonym: Chy400_0518
Alternate gene names: 222523810
Gene position: 618573-620126 (Clockwise)
Preceding gene: 222523809
Following gene: 222523812
Centisome position: 11.74
GC content: 58.24
Gene sequence:
>1554_bases GTGACCGAAACCTCTACAACGGGCGGCGTATTCCGCAGTATCGCGCTGGCAGCATTGCTCATTAGCCTGGGCAATATTGC CAGCCGTCTCCTTGGCCTGGTGCGCGAACCGATCATTGCCGCCTACTTCAGCCGTGGACTGGCAGTTGACGCCTTCACCC TGGCATGGACAATCCCAAACGCGCTTTATGAATTACTCATCAGCGGTGCGGTGAGTGCCGCCCTGGTGCCGGTATTCAGC GAGTATGCCGAACGTGACCGTGATGAGTTCTGGTATGTCGTCTCCACGGTCATCACGCTGGCCTGCACGGTGCTGGTCAT TGCCAGTGCCATACTGGCCTGGCAGGCACCACTGGCAATCGCCCTGCTGACCAGACCAACCGAGTCTGCATTGCAAGCTG AAGCGGTGGCACTGGTTGGCTGGCTGCTCCCAGCCGTGACATTGATGGGCATTTCGGGCATTGTAACGGCAATCTTGCAT GCCCAACGGCAGTTTCTGTTGCCGGCATTTGTCGCAGCAGCCTTCAACGCCGGCATGATCGTTGGCATTGTTACCCTGGC CCCGCACGTTGGGGTCAAAAGCCTCGCGGCGGGCACCCTCATCGGTGCTGCGGCACAATTGATCATTCAATTGCCGGGAT TGCGCAGAGCGCACATCCGCCCGCGCTTCGATCTGCACCATCCGGCAGTTCGCCGTATTCTACGCCTCTACGCTCCGGTC ACACTTGGGATCGGGTTCTCGCTAATTGGGGTAACGATTGATCGCTGGCTGGCCTCAGGATTTCCCGCCGCAATCTCAAC CATGCGCTTTGCTACGACGCTCATTCAGTTTCCGCTGGGACTGGTAGCGTCGGCAGTGGCACTGGCAGTGTTGCCAACCC TCTCGCGCCAAAGTGCTGCCGGCGATGAGGATGCTTTTCGGGCGACGCTGGCGATGGGGCTGAAGGTTGTGTTGCTCTTA ATCCTGCCGGCTACCGCTGGTCTGGCAGCACTCAGTCAACCAATTACGGCTGCTCTGTTCGAGCGAGGAGCGTTTCAAGC GCAAGACACAGCGATTACCGCCCTGGCGTTGCTGGCGTATCTCCCCGGATTACCGGCGGCGGCCATCGATCAGATGCTTC TCTTCGCGTTCTACGCTCGCAAGAACACGCTGACCCCCAACTTGATTCAAGGTGCAGCCATTCTGTGCTATCTGGTGGTT GCCATACCGCTTGCCGAATGGACATCGTTGGGATTTTTGGGCCTGGTACTGGGCAATTCCGCGCAGTGGATCGGTCACGC AATTATCACCGCGTGGTTGTTGCAGCGCTCGCTACCGCTGAATGGATTACGGCTCGGAGAGGCAATGATCAAGGGATTAC TGGCAAGTGGCGTGATGGCAGGTGCAGTCAGTGGGATCGCAATCCTGACCCAGCCATTACCACCCCTTGTTCAGGTGATT GTGGCGGGCAGTGCCGGGGTCTTCATCTATGCGCTGCTCGCTATGAGATTGCGTTTAGAGGCAGCTACCTTCTTTGTTGA GACCATTCGCCGTCGTCTGCATCGTTCGCATTAG
Upstream 100 bases:
>100_bases TGGCGCAACGTTTAGTGTTCAACCACAGGCTCTCCGTCGAATCGTGTCTCAGTTCACCGGCGAAGCAGTATCAACCGCCG GTGGCGAATAGCTCACTCCT
Downstream 100 bases:
>100_bases CGCTTGTGGTAGACGTTGGTCATCGTTGCCAAACCATGGGTTAGCGTCTGGCAACAAACAGGAGCCAGGAGTTGCGGCGC GCCACTCGCGCCCGATGGAG
Product: integral membrane protein MviN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 517; Mature: 516
Protein sequence:
>517_residues MTETSTTGGVFRSIALAALLISLGNIASRLLGLVREPIIAAYFSRGLAVDAFTLAWTIPNALYELLISGAVSAALVPVFS EYAERDRDEFWYVVSTVITLACTVLVIASAILAWQAPLAIALLTRPTESALQAEAVALVGWLLPAVTLMGISGIVTAILH AQRQFLLPAFVAAAFNAGMIVGIVTLAPHVGVKSLAAGTLIGAAAQLIIQLPGLRRAHIRPRFDLHHPAVRRILRLYAPV TLGIGFSLIGVTIDRWLASGFPAAISTMRFATTLIQFPLGLVASAVALAVLPTLSRQSAAGDEDAFRATLAMGLKVVLLL ILPATAGLAALSQPITAALFERGAFQAQDTAITALALLAYLPGLPAAAIDQMLLFAFYARKNTLTPNLIQGAAILCYLVV AIPLAEWTSLGFLGLVLGNSAQWIGHAIITAWLLQRSLPLNGLRLGEAMIKGLLASGVMAGAVSGIAILTQPLPPLVQVI VAGSAGVFIYALLAMRLRLEAATFFVETIRRRLHRSH
Sequences:
>Translated_517_residues MTETSTTGGVFRSIALAALLISLGNIASRLLGLVREPIIAAYFSRGLAVDAFTLAWTIPNALYELLISGAVSAALVPVFS EYAERDRDEFWYVVSTVITLACTVLVIASAILAWQAPLAIALLTRPTESALQAEAVALVGWLLPAVTLMGISGIVTAILH AQRQFLLPAFVAAAFNAGMIVGIVTLAPHVGVKSLAAGTLIGAAAQLIIQLPGLRRAHIRPRFDLHHPAVRRILRLYAPV TLGIGFSLIGVTIDRWLASGFPAAISTMRFATTLIQFPLGLVASAVALAVLPTLSRQSAAGDEDAFRATLAMGLKVVLLL ILPATAGLAALSQPITAALFERGAFQAQDTAITALALLAYLPGLPAAAIDQMLLFAFYARKNTLTPNLIQGAAILCYLVV AIPLAEWTSLGFLGLVLGNSAQWIGHAIITAWLLQRSLPLNGLRLGEAMIKGLLASGVMAGAVSGIAILTQPLPPLVQVI VAGSAGVFIYALLAMRLRLEAATFFVETIRRRLHRSH >Mature_516_residues TETSTTGGVFRSIALAALLISLGNIASRLLGLVREPIIAAYFSRGLAVDAFTLAWTIPNALYELLISGAVSAALVPVFSE YAERDRDEFWYVVSTVITLACTVLVIASAILAWQAPLAIALLTRPTESALQAEAVALVGWLLPAVTLMGISGIVTAILHA QRQFLLPAFVAAAFNAGMIVGIVTLAPHVGVKSLAAGTLIGAAAQLIIQLPGLRRAHIRPRFDLHHPAVRRILRLYAPVT LGIGFSLIGVTIDRWLASGFPAAISTMRFATTLIQFPLGLVASAVALAVLPTLSRQSAAGDEDAFRATLAMGLKVVLLLI LPATAGLAALSQPITAALFERGAFQAQDTAITALALLAYLPGLPAAAIDQMLLFAFYARKNTLTPNLIQGAAILCYLVVA IPLAEWTSLGFLGLVLGNSAQWIGHAIITAWLLQRSLPLNGLRLGEAMIKGLLASGVMAGAVSGIAILTQPLPPLVQVIV AGSAGVFIYALLAMRLRLEAATFFVETIRRRLHRSH
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=403, Percent_Identity=33.2506203473945, Blast_Score=181, Evalue=8e-47,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 54494; Mature: 54362
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETSTTGGVFRSIALAALLISLGNIASRLLGLVREPIIAAYFSRGLAVDAFTLAWTIPN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH ALYELLISGAVSAALVPVFSEYAERDRDEFWYVVSTVITLACTVLVIASAILAWQAPLAI HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLTRPTESALQAEAVALVGWLLPAVTLMGISGIVTAILHAQRQFLLPAFVAAAFNAGMI HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VGIVTLAPHVGVKSLAAGTLIGAAAQLIIQLPGLRRAHIRPRFDLHHPAVRRILRLYAPV HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHH TLGIGFSLIGVTIDRWLASGFPAAISTMRFATTLIQFPLGLVASAVALAVLPTLSRQSAA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GDEDAFRATLAMGLKVVLLLILPATAGLAALSQPITAALFERGAFQAQDTAITALALLAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LPGLPAAAIDQMLLFAFYARKNTLTPNLIQGAAILCYLVVAIPLAEWTSLGFLGLVLGNS CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AQWIGHAIITAWLLQRSLPLNGLRLGEAMIKGLLASGVMAGAVSGIAILTQPLPPLVQVI HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH VAGSAGVFIYALLAMRLRLEAATFFVETIRRRLHRSH HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TETSTTGGVFRSIALAALLISLGNIASRLLGLVREPIIAAYFSRGLAVDAFTLAWTIPN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH ALYELLISGAVSAALVPVFSEYAERDRDEFWYVVSTVITLACTVLVIASAILAWQAPLAI HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLTRPTESALQAEAVALVGWLLPAVTLMGISGIVTAILHAQRQFLLPAFVAAAFNAGMI HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VGIVTLAPHVGVKSLAAGTLIGAAAQLIIQLPGLRRAHIRPRFDLHHPAVRRILRLYAPV HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHH TLGIGFSLIGVTIDRWLASGFPAAISTMRFATTLIQFPLGLVASAVALAVLPTLSRQSAA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GDEDAFRATLAMGLKVVLLLILPATAGLAALSQPITAALFERGAFQAQDTAITALALLAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LPGLPAAAIDQMLLFAFYARKNTLTPNLIQGAAILCYLVVAIPLAEWTSLGFLGLVLGNS CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AQWIGHAIITAWLLQRSLPLNGLRLGEAMIKGLLASGVMAGAVSGIAILTQPLPPLVQVI HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH VAGSAGVFIYALLAMRLRLEAATFFVETIRRRLHRSH HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8200538; 11677609 [H]