| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523754
Identifier: 222523754
GI number: 222523754
Start: 558370
End: 559308
Strand: Reverse
Name: 222523754
Synonym: Chy400_0460
Alternate gene names: NA
Gene position: 559308-558370 (Counterclockwise)
Preceding gene: 222523755
Following gene: 222523753
Centisome position: 10.62
GC content: 61.87
Gene sequence:
>939_bases ATGACCACTTTTTCGCAGCGCCGATCTGCCAGTCAACGGTCGTCAACCTCGTCCTCGCCGGTACAGCGTACCGGTGACAA TGATCTGCTGCAACATTTGCTCTTGAACGATCTCCCTGCCCGGCGCGATCCGTTTCGTCCGCTGCGCCTGCGTTCGCGGG ATGCATATCGCGAAGAAGCCTTACGCGGCTTCCTGTTGCGCAATTGGGTGGATCGCGCATTGCTCATCGCCGAAATCTTG CTCTTCGCCACAATGGTGATCGTCTTTGCCTACTGGTTCATCGACGGCTATGGCCGCGACTGGTGGCGAGCCTGGCAGGG CAAGAGCCAGCCGGCAGAGGTGATCATGCCACCGCCAGCCCCGGTTGCACCGCCGGCAGAGGAGATCACATCACCACCAC CAGCCCCGGTTGCACCGCCGGCAGCCGCACCGCACCTGCCGGCACTACCCTTCACCGACCCTGGTCTGGCGGTTGAGCCG GCTGATTACCTTGCCCCGCAGACCAGTGTCAAACCGCTGCCGAAAACCGATCCGCGACCGCAGCGACTGCGTATTCCCAG CATCCAGCTTGACACGCCGGTGTACGAGGTCTTTGTCGTTGATGGCGCGTGGCAGGTCGCTGAATATGCCGCCGGCTATC ATCACGGCACGGCCCTACCGGGCACGACGGGCAATACCGTGCTGGCCGGACATGCCGGCTTGCGTGGCGCTGTGTTTCGT GATCTGCCGGCACTGCGTCCTGGTGATGAGATATTGCTGGAGGCGGGCGGTTGGGTATACCGCTACCGAGTGCGCGAGAT GCGTAACGTCTGGCCGACCCAGGTTGAAGTGATGGATCCGACACCGACCCCTGTTTTGACCCTGATAACCTGTACCAACT GGGACACGCAGCGCCTGGTCGTCATTGCCGATCTGGTCGATTCGCGTCCACTCAGTTGA
Upstream 100 bases:
>100_bases AATCGCTCATTCTATCGGTCAGACTATTGCAGATGATCCTATCGTCGTGTATAATGCTTCCAATCGACTTGCCGGTACTG GCTTCAGAGACAGTAAAACA
Downstream 100 bases:
>100_bases GATTGAGGAGATCGTATGCCACCAAAGCCGTCACCTGCAACCAGACTCCCTCCCGGTCGTGGACGCGCACCGGCACCATG GACAATCTGGGAGATCATGG
Product: sortase family protein
Products: NA
Alternate protein names: Peptidase; Sortase
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MTTFSQRRSASQRSSTSSSPVQRTGDNDLLQHLLLNDLPARRDPFRPLRLRSRDAYREEALRGFLLRNWVDRALLIAEIL LFATMVIVFAYWFIDGYGRDWWRAWQGKSQPAEVIMPPPAPVAPPAEEITSPPPAPVAPPAAAPHLPALPFTDPGLAVEP ADYLAPQTSVKPLPKTDPRPQRLRIPSIQLDTPVYEVFVVDGAWQVAEYAAGYHHGTALPGTTGNTVLAGHAGLRGAVFR DLPALRPGDEILLEAGGWVYRYRVREMRNVWPTQVEVMDPTPTPVLTLITCTNWDTQRLVVIADLVDSRPLS
Sequences:
>Translated_312_residues MTTFSQRRSASQRSSTSSSPVQRTGDNDLLQHLLLNDLPARRDPFRPLRLRSRDAYREEALRGFLLRNWVDRALLIAEIL LFATMVIVFAYWFIDGYGRDWWRAWQGKSQPAEVIMPPPAPVAPPAEEITSPPPAPVAPPAAAPHLPALPFTDPGLAVEP ADYLAPQTSVKPLPKTDPRPQRLRIPSIQLDTPVYEVFVVDGAWQVAEYAAGYHHGTALPGTTGNTVLAGHAGLRGAVFR DLPALRPGDEILLEAGGWVYRYRVREMRNVWPTQVEVMDPTPTPVLTLITCTNWDTQRLVVIADLVDSRPLS >Mature_311_residues TTFSQRRSASQRSSTSSSPVQRTGDNDLLQHLLLNDLPARRDPFRPLRLRSRDAYREEALRGFLLRNWVDRALLIAEILL FATMVIVFAYWFIDGYGRDWWRAWQGKSQPAEVIMPPPAPVAPPAEEITSPPPAPVAPPAAAPHLPALPFTDPGLAVEPA DYLAPQTSVKPLPKTDPRPQRLRIPSIQLDTPVYEVFVVDGAWQVAEYAAGYHHGTALPGTTGNTVLAGHAGLRGAVFRD LPALRPGDEILLEAGGWVYRYRVREMRNVWPTQVEVMDPTPTPVLTLITCTNWDTQRLVVIADLVDSRPLS
Specific function: Unknown
COG id: COG3764
COG function: function code M; Sortase (surface protein transpeptidase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34686; Mature: 34555
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFSQRRSASQRSSTSSSPVQRTGDNDLLQHLLLNDLPARRDPFRPLRLRSRDAYREEA CCCCHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHH LRGFLLRNWVDRALLIAEILLFATMVIVFAYWFIDGYGRDWWRAWQGKSQPAEVIMPPPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEECCCC PVAPPAEEITSPPPAPVAPPAAAPHLPALPFTDPGLAVEPADYLAPQTSVKPLPKTDPRP CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHCCCCCCCCCCCCCCCC QRLRIPSIQLDTPVYEVFVVDGAWQVAEYAAGYHHGTALPGTTGNTVLAGHAGLRGAVFR CEEECCCEEECCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHH DLPALRPGDEILLEAGGWVYRYRVREMRNVWPTQVEVMDPTPTPVLTLITCTNWDTQRLV HCCCCCCCCCEEEECCCEEEEHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCCCEEE VIADLVDSRPLS EEEEHHCCCCCC >Mature Secondary Structure TTFSQRRSASQRSSTSSSPVQRTGDNDLLQHLLLNDLPARRDPFRPLRLRSRDAYREEA CCCHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHH LRGFLLRNWVDRALLIAEILLFATMVIVFAYWFIDGYGRDWWRAWQGKSQPAEVIMPPPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEECCCC PVAPPAEEITSPPPAPVAPPAAAPHLPALPFTDPGLAVEPADYLAPQTSVKPLPKTDPRP CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHCCCCCCCCCCCCCCCC QRLRIPSIQLDTPVYEVFVVDGAWQVAEYAAGYHHGTALPGTTGNTVLAGHAGLRGAVFR CEEECCCEEECCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHH DLPALRPGDEILLEAGGWVYRYRVREMRNVWPTQVEVMDPTPTPVLTLITCTNWDTQRLV HCCCCCCCCCEEEECCCEEEEHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCCCEEE VIADLVDSRPLS EEEEHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA