Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222523753

Identifier: 222523753

GI number: 222523753

Start: 556471

End: 558354

Strand: Reverse

Name: 222523753

Synonym: Chy400_0459

Alternate gene names: NA

Gene position: 558354-556471 (Counterclockwise)

Preceding gene: 222523754

Following gene: 222523751

Centisome position: 10.6

GC content: 61.52

Gene sequence:

>1884_bases
ATGCCACCAAAGCCGTCACCTGCAACCAGACTCCCTCCCGGTCGTGGACGCGCACCGGCACCATGGACAATCTGGGAGAT
CATGGCGATTACGGTGAGTGTGTTGATGATCGTGGTGCCGCTCACACTGGAAGGGCTGAACTGGATCAGGCCACCGGTTG
CTCCTGCTCAGGAACTAATGGCTGCGACCGAAACGCCAGTCAGCCTCGAACAACGACCACCGACATTTACTCCACTGGCG
ACGGCTACACCGGGTTCGCCGGTGCCGACCAATACACTCACACCGACCAATATCCCGACCGGGGTGACGGTCACCCCGAC
CGGGGAAACGGTCACCCCCACCGGGGTGACGGTCACCCCGACCAATACATCACTCCCAACACTTACCCCTTCGCCAACAC
CGGGTACGACCCGTGTAAACAAATTTGCTTCATTGAGCACTGTCAATATCGGGCAATCATTCAGCTACAGTCTGGCGGTT
ACAACGCAGAGTGATAGCCCGATTACGCTCACCTTACGCGATGTACTGGATGCAAATCTGGAACTAATAGAGGCGTCCGC
TTTTGGGGGAACATGTTTTCCAGGCCAGACCGTACTCTGCACCCTGACGGTAAGTCGATTCAACCCGGCGTCGGTGACGT
TACAGGTGCGGGTACGTGCATCGGCAACGGAAGGGTCAATTATTCCCAACCAGGCTGTGTTGGAACAGGGTAGCTTGCAG
GTCGGGGTTTCCAATGTGGTGAATGTAACTGTTGCCGGGGGGACTGTCCCTACCAGTTCTCCAACTGAAACACCGACAGT
AACGGCTACTAGTACTGCCACCAACACCCCAACTGCCACATCGGTGACGCCAACACCTGTCTCTACGACATCGACCCCAA
CGGCCACGAACACACCGGTCGTTCAGCCAACATCACCACCGCGTCCGACATCACCACCGCCACCGCCGCGTCCGACCGAA
CCACTACCGGCGCCAACATCACCGCCGACACCAACTGCACCACCGCCGCCGGTAGTCTTACCCACCGAGCCACCACCACC
GGCACCGGTAGCAACAGTTGCGCCACGGCCAACGGCGACACCACGGCCACGTCCGCCGGCACCGCCAACGAACACGCCAA
CCCCGGCTGCTTCACCAACACCAACCGAGCCGCCGGCGCCGGCTGCGTTCGCTGAGAGTGATCTGCTCCTACGGCTCGCC
AGCGATTGGGGAAGTGCTTACGCCGGGCAAGACATTGTGTTTACCATTGTGCTCGGTAACACCCACCCGGCGCAGACGGT
GAGTGCCGTAAGCCTGCGCAGCGTCATGCCCTCGAATCTCCAGGTGCTGGGCGCAAACGCGAGCCGGGGCGCCGATCCGA
CGATCAACGGTCAGACGGTAACATACCTTGCGCCAGACTTAGCACCCGGTGAACGGGTTGAGGTGACCATCGCTACCCGC
ATTCGCTCAGATGTGGCTGCCGGTACCCTCCTCGTCGTACAGGCGCAGGCCAACCAACGCGACCTCAGCCGACCGGTCTT
CTCGAACATCAGTACGGTGCTGGTGGTTGGTGGACAACAGGTAGCAACGGCAACCGCAACCGCAACCCGTGCACCGGCCA
CACTCACCGCGACGGTCGTTTCGCCGACAGCTGGCACAACCGCAACCTCTGCACCGGCCACGGCTACGGCAACCGCAACA
CCTGATATTGTGCTGGGTGGAGGTGCGCCGCCAGCCGTGACAACCACGCCGACCACAACACCGCCGGCGGCAGGGGGCGC
AAGTGGCGGTCAGGCACCGCTGCCAAACACCAGCGCCGGCATTCCGTTCCTGGGTGTGCTGTTGCTCGGCGCAACCCTGC
TAACCCGCACCATCCGACTGCACCGTGCTCGCGAGCGGCTTTGA

Upstream 100 bases:

>100_bases
TTTGACCCTGATAACCTGTACCAACTGGGACACGCAGCGCCTGGTCGTCATTGCCGATCTGGTCGATTCGCGTCCACTCA
GTTGAGATTGAGGAGATCGT

Downstream 100 bases:

>100_bases
CAGCGGGGGAAGGTAGGGGGTAGAGTAAGGGCGCACGGCTGTGCGCCCTGTCTGTTGAACTGATCAGATGATCAGGATGA
AATAATCATAATAACCAAGT

Product: putative FHA domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 627; Mature: 626

Protein sequence:

>627_residues
MPPKPSPATRLPPGRGRAPAPWTIWEIMAITVSVLMIVVPLTLEGLNWIRPPVAPAQELMAATETPVSLEQRPPTFTPLA
TATPGSPVPTNTLTPTNIPTGVTVTPTGETVTPTGVTVTPTNTSLPTLTPSPTPGTTRVNKFASLSTVNIGQSFSYSLAV
TTQSDSPITLTLRDVLDANLELIEASAFGGTCFPGQTVLCTLTVSRFNPASVTLQVRVRASATEGSIIPNQAVLEQGSLQ
VGVSNVVNVTVAGGTVPTSSPTETPTVTATSTATNTPTATSVTPTPVSTTSTPTATNTPVVQPTSPPRPTSPPPPPRPTE
PLPAPTSPPTPTAPPPPVVLPTEPPPPAPVATVAPRPTATPRPRPPAPPTNTPTPAASPTPTEPPAPAAFAESDLLLRLA
SDWGSAYAGQDIVFTIVLGNTHPAQTVSAVSLRSVMPSNLQVLGANASRGADPTINGQTVTYLAPDLAPGERVEVTIATR
IRSDVAAGTLLVVQAQANQRDLSRPVFSNISTVLVVGGQQVATATATATRAPATLTATVVSPTAGTTATSAPATATATAT
PDIVLGGGAPPAVTTTPTTTPPAAGGASGGQAPLPNTSAGIPFLGVLLLGATLLTRTIRLHRARERL

Sequences:

>Translated_627_residues
MPPKPSPATRLPPGRGRAPAPWTIWEIMAITVSVLMIVVPLTLEGLNWIRPPVAPAQELMAATETPVSLEQRPPTFTPLA
TATPGSPVPTNTLTPTNIPTGVTVTPTGETVTPTGVTVTPTNTSLPTLTPSPTPGTTRVNKFASLSTVNIGQSFSYSLAV
TTQSDSPITLTLRDVLDANLELIEASAFGGTCFPGQTVLCTLTVSRFNPASVTLQVRVRASATEGSIIPNQAVLEQGSLQ
VGVSNVVNVTVAGGTVPTSSPTETPTVTATSTATNTPTATSVTPTPVSTTSTPTATNTPVVQPTSPPRPTSPPPPPRPTE
PLPAPTSPPTPTAPPPPVVLPTEPPPPAPVATVAPRPTATPRPRPPAPPTNTPTPAASPTPTEPPAPAAFAESDLLLRLA
SDWGSAYAGQDIVFTIVLGNTHPAQTVSAVSLRSVMPSNLQVLGANASRGADPTINGQTVTYLAPDLAPGERVEVTIATR
IRSDVAAGTLLVVQAQANQRDLSRPVFSNISTVLVVGGQQVATATATATRAPATLTATVVSPTAGTTATSAPATATATAT
PDIVLGGGAPPAVTTTPTTTPPAAGGASGGQAPLPNTSAGIPFLGVLLLGATLLTRTIRLHRARERL
>Mature_626_residues
PPKPSPATRLPPGRGRAPAPWTIWEIMAITVSVLMIVVPLTLEGLNWIRPPVAPAQELMAATETPVSLEQRPPTFTPLAT
ATPGSPVPTNTLTPTNIPTGVTVTPTGETVTPTGVTVTPTNTSLPTLTPSPTPGTTRVNKFASLSTVNIGQSFSYSLAVT
TQSDSPITLTLRDVLDANLELIEASAFGGTCFPGQTVLCTLTVSRFNPASVTLQVRVRASATEGSIIPNQAVLEQGSLQV
GVSNVVNVTVAGGTVPTSSPTETPTVTATSTATNTPTATSVTPTPVSTTSTPTATNTPVVQPTSPPRPTSPPPPPRPTEP
LPAPTSPPTPTAPPPPVVLPTEPPPPAPVATVAPRPTATPRPRPPAPPTNTPTPAASPTPTEPPAPAAFAESDLLLRLAS
DWGSAYAGQDIVFTIVLGNTHPAQTVSAVSLRSVMPSNLQVLGANASRGADPTINGQTVTYLAPDLAPGERVEVTIATRI
RSDVAAGTLLVVQAQANQRDLSRPVFSNISTVLVVGGQQVATATATATRAPATLTATVVSPTAGTTATSAPATATATATP
DIVLGGGAPPAVTTTPTTTPPAAGGASGGQAPLPNTSAGIPFLGVLLLGATLLTRTIRLHRARERL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63508; Mature: 63376

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPKPSPATRLPPGRGRAPAPWTIWEIMAITVSVLMIVVPLTLEGLNWIRPPVAPAQELM
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
AATETPVSLEQRPPTFTPLATATPGSPVPTNTLTPTNIPTGVTVTPTGETVTPTGVTVTP
HHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEECCCCCEECCCCCEEEC
TNTSLPTLTPSPTPGTTRVNKFASLSTVNIGQSFSYSLAVTTQSDSPITLTLRDVLDANL
CCCCCCCCCCCCCCCCCHHHHHHCEEEEECCCCCEEEEEEEECCCCCEEEEEHHHHCCCE
ELIEASAFGGTCFPGQTVLCTLTVSRFNPASVTLQVRVRASATEGSIIPNQAVLEQGSLQ
EEEEEECCCCCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCHHHHHCCCEE
VGVSNVVNVTVAGGTVPTSSPTETPTVTATSTATNTPTATSVTPTPVSTTSTPTATNTPV
EECCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
VQPTSPPRPTSPPPPPRPTEPLPAPTSPPTPTAPPPPVVLPTEPPPPAPVATVAPRPTAT
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCCC
PRPRPPAPPTNTPTPAASPTPTEPPAPAAFAESDLLLRLASDWGSAYAGQDIVFTIVLGN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEEHHHHCCCCCCCCEEEEEEECC
THPAQTVSAVSLRSVMPSNLQVLGANASRGADPTINGQTVTYLAPDLAPGERVEVTIATR
CCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEH
IRSDVAAGTLLVVQAQANQRDLSRPVFSNISTVLVVGGQQVATATATATRAPATLTATVV
HHHHHCCCEEEEEEECCCCHHHCCHHHHCCCEEEEECCCEEEEEEHHCCCCCCEEEEEEE
SPTAGTTATSAPATATATATPDIVLGGGAPPAVTTTPTTTPPAAGGASGGQAPLPNTSAG
CCCCCCCCCCCCCCEEECCCCCEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCC
IPFLGVLLLGATLLTRTIRLHRARERL
CHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PPKPSPATRLPPGRGRAPAPWTIWEIMAITVSVLMIVVPLTLEGLNWIRPPVAPAQELM
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
AATETPVSLEQRPPTFTPLATATPGSPVPTNTLTPTNIPTGVTVTPTGETVTPTGVTVTP
HHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEECCCCCEECCCCCEEEC
TNTSLPTLTPSPTPGTTRVNKFASLSTVNIGQSFSYSLAVTTQSDSPITLTLRDVLDANL
CCCCCCCCCCCCCCCCCHHHHHHCEEEEECCCCCEEEEEEEECCCCCEEEEEHHHHCCCE
ELIEASAFGGTCFPGQTVLCTLTVSRFNPASVTLQVRVRASATEGSIIPNQAVLEQGSLQ
EEEEEECCCCCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCHHHHHCCCEE
VGVSNVVNVTVAGGTVPTSSPTETPTVTATSTATNTPTATSVTPTPVSTTSTPTATNTPV
EECCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
VQPTSPPRPTSPPPPPRPTEPLPAPTSPPTPTAPPPPVVLPTEPPPPAPVATVAPRPTAT
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCCC
PRPRPPAPPTNTPTPAASPTPTEPPAPAAFAESDLLLRLASDWGSAYAGQDIVFTIVLGN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEEHHHHCCCCCCCCEEEEEEECC
THPAQTVSAVSLRSVMPSNLQVLGANASRGADPTINGQTVTYLAPDLAPGERVEVTIATR
CCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEH
IRSDVAAGTLLVVQAQANQRDLSRPVFSNISTVLVVGGQQVATATATATRAPATLTATVV
HHHHHCCCEEEEEEECCCCHHHCCHHHHCCCEEEEECCCEEEEEEHHCCCCCCEEEEEEE
SPTAGTTATSAPATATATATPDIVLGGGAPPAVTTTPTTTPPAAGGASGGQAPLPNTSAG
CCCCCCCCCCCCCCEEECCCCCEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCC
IPFLGVLLLGATLLTRTIRLHRARERL
CHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA