Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222523752

Identifier: 222523752

GI number: 222523752

Start: 555905

End: 556342

Strand: Direct

Name: 222523752

Synonym: Chy400_0458

Alternate gene names: NA

Gene position: 555905-556342 (Clockwise)

Preceding gene: 222523746

Following gene: 222523759

Centisome position: 10.55

GC content: 58.22

Gene sequence:

>438_bases
GTGAATTCATCACCTCCATCCTCACAACCATCACGCATTGACTATAGCCGGCTCTTCTTGCGCTGGCTCATCTATTCGCT
GGCCATCTTTGCCGCGGTCTGGATCGTGCCGGGGATCGAGTTCAGCGGGCCGGGGTGGCAGATTGGCATTGTCGCTCTGC
TGTTTGGGCTACTCAATGCCTTGCTGCGTCCACTGCTCTACCTGCTGACCTGTCCGCTCGTTATTCTCACGCTCGGTCTG
TTTGGTCTGGTGATTAACGCCCTGTTACTTGGCCTGACCTCAGCCCTGGCCGATCAGCTCGGTATCGCCTTCACGGTTGA
TGGGTTCTGGCCGGCATTCTTCGGCGGCCTGGTCATCGCTATCGTCAGCACGACCCTGCAATACCTTGCCGGAGACGTGC
AGGTGCGGATTATGGTAGAGCGCCGACCACCAGAGTAG

Upstream 100 bases:

>100_bases
ATAGCGGTTGTCACCACACGTAACGCCGCGCCGTATAGTATCATACTCACGGCAGATGAGCGAGTCGTACCGATTTGTAC
AGAGATGGAAGGAGCAAGTC

Downstream 100 bases:

>100_bases
ATAGGGGTAGGAGGCAAGTATTTGAGCTACTTGGTTATTATGATTATTTCATCCTGATCATCTGATCAGTTCAACAGACA
GGGCGCACAGCCGTGCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MNSSPPSSQPSRIDYSRLFLRWLIYSLAIFAAVWIVPGIEFSGPGWQIGIVALLFGLLNALLRPLLYLLTCPLVILTLGL
FGLVINALLLGLTSALADQLGIAFTVDGFWPAFFGGLVIAIVSTTLQYLAGDVQVRIMVERRPPE

Sequences:

>Translated_145_residues
MNSSPPSSQPSRIDYSRLFLRWLIYSLAIFAAVWIVPGIEFSGPGWQIGIVALLFGLLNALLRPLLYLLTCPLVILTLGL
FGLVINALLLGLTSALADQLGIAFTVDGFWPAFFGGLVIAIVSTTLQYLAGDVQVRIMVERRPPE
>Mature_145_residues
MNSSPPSSQPSRIDYSRLFLRWLIYSLAIFAAVWIVPGIEFSGPGWQIGIVALLFGLLNALLRPLLYLLTCPLVILTLGL
FGLVINALLLGLTSALADQLGIAFTVDGFWPAFFGGLVIAIVSTTLQYLAGDVQVRIMVERRPPE

Specific function: Unknown

COG id: COG1950

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007165 [H]

Pfam domain/function: PF04020 DUF360 [H]

EC number: NA

Molecular weight: Translated: 15803; Mature: 15803

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSSPPSSQPSRIDYSRLFLRWLIYSLAIFAAVWIVPGIEFSGPGWQIGIVALLFGLLNA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
LLRPLLYLLTCPLVILTLGLFGLVINALLLGLTSALADQLGIAFTVDGFWPAFFGGLVIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHH
IVSTTLQYLAGDVQVRIMVERRPPE
HHHHHHHHHHCCCEEEEEECCCCCC
>Mature Secondary Structure
MNSSPPSSQPSRIDYSRLFLRWLIYSLAIFAAVWIVPGIEFSGPGWQIGIVALLFGLLNA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
LLRPLLYLLTCPLVILTLGLFGLVINALLLGLTSALADQLGIAFTVDGFWPAFFGGLVIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHH
IVSTTLQYLAGDVQVRIMVERRPPE
HHHHHHHHHHCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8550407; 12000953 [H]