| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222523750
Identifier: 222523750
GI number: 222523750
Start: 554113
End: 554406
Strand: Reverse
Name: 222523750
Synonym: Chy400_0456
Alternate gene names: NA
Gene position: 554406-554113 (Counterclockwise)
Preceding gene: 222523751
Following gene: 222523749
Centisome position: 10.52
GC content: 55.78
Gene sequence:
>294_bases ATGGCGTCGGTAACGGTAAGTTTTGAAGTGTTGCCCGGCGGATTACCTGATAAGGCAACGACGTATGCTGCCGTGGATGC CGCGATTGCGGTCGTTGCCGCCAGCGGTCTGACCTACCGTGTCTGCCCGATGGAAACGACGATTGAAGGCGATTACGATG CAATTATGGCGGTGATCAAACAGGCGCAAGAGGCGGTGCTGGCAGCCGGCGCCAGTCGCGTCTTTACCCTCATCAAGGTG GATTACGACCCCAATGGATCATCAATCGCCGAAAAGCTGGCTAAGTATGAGTGA
Upstream 100 bases:
>100_bases GAAGGCGTATTGATGATACCCCGTCATTCCTCAGCGCTGGAATGGCGGTTTTTGTTTGTACGTGGTTTGGTTGGTTGTGA GATGGGAAAGGAGTTCAGCG
Downstream 100 bases:
>100_bases CGATGTCTCGCAATCGATGCCTGCGACGCCGGTCACGGTAGCAGTGCGTCCTTCGTGGCGGGCCGGTCTGTTCGAGTATG GCCCGCCGACATTGCTCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MASVTVSFEVLPGGLPDKATTYAAVDAAIAVVAASGLTYRVCPMETTIEGDYDAIMAVIKQAQEAVLAAGASRVFTLIKV DYDPNGSSIAEKLAKYE
Sequences:
>Translated_97_residues MASVTVSFEVLPGGLPDKATTYAAVDAAIAVVAASGLTYRVCPMETTIEGDYDAIMAVIKQAQEAVLAAGASRVFTLIKV DYDPNGSSIAEKLAKYE >Mature_96_residues ASVTVSFEVLPGGLPDKATTYAAVDAAIAVVAASGLTYRVCPMETTIEGDYDAIMAVIKQAQEAVLAAGASRVFTLIKVD YDPNGSSIAEKLAKYE
Specific function: Unknown
COG id: COG0011
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0045 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002767 - InterPro: IPR016198 [H]
Pfam domain/function: PF01910 DUF77 [H]
EC number: NA
Molecular weight: Translated: 10103; Mature: 9971
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVTVSFEVLPGGLPDKATTYAAVDAAIAVVAASGLTYRVCPMETTIEGDYDAIMAVIK CCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCEECCCCHHHHHHHHH QAQEAVLAAGASRVFTLIKVDYDPNGSSIAEKLAKYE HHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHCCC >Mature Secondary Structure ASVTVSFEVLPGGLPDKATTYAAVDAAIAVVAASGLTYRVCPMETTIEGDYDAIMAVIK CEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCEECCCCHHHHHHHHH QAQEAVLAAGASRVFTLIKVDYDPNGSSIAEKLAKYE HHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8052128; 11792842 [H]