| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is bchX [H]
Identifier: 222523738
GI number: 222523738
Start: 540935
End: 542170
Strand: Direct
Name: bchX [H]
Synonym: Chy400_0444
Alternate gene names: 222523738
Gene position: 540935-542170 (Clockwise)
Preceding gene: 222523737
Following gene: 222523739
Centisome position: 10.27
GC content: 57.04
Gene sequence:
>1236_bases ATGCCCGCCCATCCAAAAACGAAACAACCAGGTTCAACAGCACGAATGCTCGCCGTCTACGGCAAAGGCGGCATGGGAAA ATCATTCTTCACCACCAATCTGGTAAGCAAGCTGGCCCTGTTGGGAAATCGCGTGCTTCAGCTCGGTTGCGATCCCAAAC ACGATAGTTGCAATGCCCTGTTCGGCGGTATCAGTCTGCCAACACTCGGTGATGTCTGGCGCGAGTTCAAAGAAGCCGGG CGCGAAGAGGAGCTGGCCGCCCATCACGTCATCTTTAAGACCACCATCATGAATGGTGCGGCAACTGTCTATGGCTGTGA GATTGGCGGGCCGGAAGTAGGACGTGGCTGTGGTGGACGTGGAATCACGTTCGGCTTTGATATGCTCGAAAAGTTCGGCC TCAGCCAATGGGCGCTTGACTATGTGGTGATGGATTTTCTCGGCGATGTGGTCTGTGGTGGGTTTGCAACACCCCTCTCA CGTTCACTGGCTGAAGAGGTCATCATTCTCTGCGGGAACGACCGGCAAAGCCTCTACGCTGCCAACAACATTGCCAGCGC GGCCAAATACTTCGCCAGCATGGGTGGGCGCACCAAACTGCTGGGGCTGGTGGTCAATCGCGACGACGGTAGCGGTGTGG CGGCCCGCTTCGCCGAAAAGATCAATCTGCCGGTACTGGCCAGCATTCCCCTGGATCGCAAAGTGCGCGAATTGGCCGAT GCCTGTCAGTTAGCTTTGCAAGAGCCGCGTTTTGATGCTCTCTTTGACCGACTGGCGCGTCAGATCATCGACCGCACGTT GCCGACGGTCAAGATGGAAGAGGTACAACCTCTTCCATACAAAGAATTTCTCAGCGTCTTTGGAGCCGAAGAGCCAGATA TTACGCCGACCGGAGCGACCGCTGAAGAATTGTTCGGTGACCACCAGGTACGCCAGCCGGCACCGGTGATCACGCTTGGC CTGATGGAGCGAGCGGTCGGCGAGAAGCCAGAGATGGATGCCCCAACCCGGCTGGTTGTCACCCGGTTGCTCAAAGAATT GGGTATGTACGTCACCGAAGCCAACCACGATCCGAAGAAGGGCATGACGCTAACGATTGATGGGCATACGACGGTGTGCA TAGGTAACACCGACGATCTGGACAGCAAGATTGCCATCCTGGCGGCCTTGCAGCGTTCAGGAGAGCCGTTCCGCTACGTT GATCTGCGCCGACCGGCCAGCCCGTTCTACCGGTAA
Upstream 100 bases:
>100_bases TTGAAGGTTGTTGTCACGTGGCCGCAAAACGGTACCGACGCAGCGTAGTACTCACTCGCCAAGGAGCAATGCGCATCAGC CTGGAAAGAGAGATGGCTTT
Downstream 100 bases:
>100_bases GCGGGCGCAGCATTGTAACCGCAGGTTGGATGATGGAGGTGGGCAATGTGGCTACGCCTTGCCAGACAAACCACTGAGTA TCGGGTCGCGCCGCTCAGGT
Product: chlorophyllide reductase iron protein subunit X
Products: NA
Alternate protein names: Chlorin reductase [H]
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MPAHPKTKQPGSTARMLAVYGKGGMGKSFFTTNLVSKLALLGNRVLQLGCDPKHDSCNALFGGISLPTLGDVWREFKEAG REEELAAHHVIFKTTIMNGAATVYGCEIGGPEVGRGCGGRGITFGFDMLEKFGLSQWALDYVVMDFLGDVVCGGFATPLS RSLAEEVIILCGNDRQSLYAANNIASAAKYFASMGGRTKLLGLVVNRDDGSGVAARFAEKINLPVLASIPLDRKVRELAD ACQLALQEPRFDALFDRLARQIIDRTLPTVKMEEVQPLPYKEFLSVFGAEEPDITPTGATAEELFGDHQVRQPAPVITLG LMERAVGEKPEMDAPTRLVVTRLLKELGMYVTEANHDPKKGMTLTIDGHTTVCIGNTDDLDSKIAILAALQRSGEPFRYV DLRRPASPFYR
Sequences:
>Translated_411_residues MPAHPKTKQPGSTARMLAVYGKGGMGKSFFTTNLVSKLALLGNRVLQLGCDPKHDSCNALFGGISLPTLGDVWREFKEAG REEELAAHHVIFKTTIMNGAATVYGCEIGGPEVGRGCGGRGITFGFDMLEKFGLSQWALDYVVMDFLGDVVCGGFATPLS RSLAEEVIILCGNDRQSLYAANNIASAAKYFASMGGRTKLLGLVVNRDDGSGVAARFAEKINLPVLASIPLDRKVRELAD ACQLALQEPRFDALFDRLARQIIDRTLPTVKMEEVQPLPYKEFLSVFGAEEPDITPTGATAEELFGDHQVRQPAPVITLG LMERAVGEKPEMDAPTRLVVTRLLKELGMYVTEANHDPKKGMTLTIDGHTTVCIGNTDDLDSKIAILAALQRSGEPFRYV DLRRPASPFYR >Mature_410_residues PAHPKTKQPGSTARMLAVYGKGGMGKSFFTTNLVSKLALLGNRVLQLGCDPKHDSCNALFGGISLPTLGDVWREFKEAGR EEELAAHHVIFKTTIMNGAATVYGCEIGGPEVGRGCGGRGITFGFDMLEKFGLSQWALDYVVMDFLGDVVCGGFATPLSR SLAEEVIILCGNDRQSLYAANNIASAAKYFASMGGRTKLLGLVVNRDDGSGVAARFAEKINLPVLASIPLDRKVRELADA CQLALQEPRFDALFDRLARQIIDRTLPTVKMEEVQPLPYKEFLSVFGAEEPDITPTGATAEELFGDHQVRQPAPVITLGL MERAVGEKPEMDAPTRLVVTRLLKELGMYVTEANHDPKKGMTLTIDGHTTVCIGNTDDLDSKIAILAALQRSGEPFRYVD LRRPASPFYR
Specific function: Converts chlorophylls (Chl) into bacteriochlorophylls (BChl) by reducing ring B of the tetrapyrrole [H]
COG id: COG1348
COG function: function code P; Nitrogenase subunit NifH (ATPase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NifH/BchL/ChlL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010246 - InterPro: IPR000392 [H]
Pfam domain/function: PF00142 Fer4_NifH [H]
EC number: NA
Molecular weight: Translated: 44681; Mature: 44550
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS00746 NIFH_FRXC_1 ; PS00692 NIFH_FRXC_2 ; PS51026 NIFH_FRXC_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAHPKTKQPGSTARMLAVYGKGGMGKSFFTTNLVSKLALLGNRVLQLGCDPKHDSCNAL CCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHH FGGISLPTLGDVWREFKEAGREEELAAHHVIFKTTIMNGAATVYGCEIGGPEVGRGCGGR CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC GITFGFDMLEKFGLSQWALDYVVMDFLGDVVCGGFATPLSRSLAEEVIILCGNDRQSLYA CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCEEEEECCCCHHHHH ANNIASAAKYFASMGGRTKLLGLVVNRDDGSGVAARFAEKINLPVLASIPLDRKVRELAD HHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCEEECCCCCHHHHHHHH ACQLALQEPRFDALFDRLARQIIDRTLPTVKMEEVQPLPYKEFLSVFGAEEPDITPTGAT HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCCC AEELFGDHQVRQPAPVITLGLMERAVGEKPEMDAPTRLVVTRLLKELGMYVTEANHDPKK HHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCC GMTLTIDGHTTVCIGNTDDLDSKIAILAALQRSGEPFRYVDLRRPASPFYR CEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC >Mature Secondary Structure PAHPKTKQPGSTARMLAVYGKGGMGKSFFTTNLVSKLALLGNRVLQLGCDPKHDSCNAL CCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHH FGGISLPTLGDVWREFKEAGREEELAAHHVIFKTTIMNGAATVYGCEIGGPEVGRGCGGR CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC GITFGFDMLEKFGLSQWALDYVVMDFLGDVVCGGFATPLSRSLAEEVIILCGNDRQSLYA CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCEEEEECCCCHHHHH ANNIASAAKYFASMGGRTKLLGLVVNRDDGSGVAARFAEKINLPVLASIPLDRKVRELAD HHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCEEECCCCCHHHHHHHH ACQLALQEPRFDALFDRLARQIIDRTLPTVKMEEVQPLPYKEFLSVFGAEEPDITPTGAT HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCCC AEELFGDHQVRQPAPVITLGLMERAVGEKPEMDAPTRLVVTRLLKELGMYVTEANHDPKK HHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCC GMTLTIDGHTTVCIGNTDDLDSKIAILAALQRSGEPFRYVDLRRPASPFYR CEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8468299 [H]