| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is bchC [H]
Identifier: 222523737
GI number: 222523737
Start: 539893
End: 540882
Strand: Direct
Name: bchC [H]
Synonym: Chy400_0443
Alternate gene names: 222523737
Gene position: 539893-540882 (Clockwise)
Preceding gene: 222523736
Following gene: 222523738
Centisome position: 10.25
GC content: 58.69
Gene sequence:
>990_bases ATGCCGATCAAGTCACGAGCAGTAGTTATTCCAAAGCGAAACACGATTGAGATTCGCACGGTGCAGGTTAATGAACCAAA AGCCGGTGATGTGCTGATCAAGACTGCCTTTACGTCGATTAGCGCCGGTACCGAACGGATGTTGCTTGATGGCCGGCTGC CCCAACCACAACTGCTCTTCCCGGTTGTGCCCGGCTACGAGACGGTTGGGCAGGTGGTGCAGGTTGGTAGTAAAGCACCG AAAGAATTGCTCGGTCAATGGGTGTATATCGGCGGTGCCCGCTGCTTCCGCGGCGTCAATGCGGCCTGGGGTGGACAGAG TGAGTACATTACCGCCGAACACGAACGAGTTGTGCCGCTTGGTTCGCTCGACCCGGCCACCGGGGTGTTGCTGGCTCTGG CCGCCACAGCACTGCACGGTATCAAAATCGGCCAGATTCGCCGCAGTGATCGGGTGCTGGTTTTGGGGCAGGGCATTGTC GGTCAACTGGCAGCCCGCCTGGCAAAATATGCCGGTGCTCAGCACGTGGCCGTCGCCGACCGGGTGGCAGTACGCTTGCA AGCCAGTCAGGCCGACCAGGTTATCGATGTTACCCGTGAGTCGCTTGACGAAGCTATCGGCGAAGCCAAGGTTGATGTGC TGATCGAGGCCACCGGCTCGATGGGTGCCTTGTCGGGAGCATTACCGCTCCTGGCTAACCACGGGCGAGTCGTGTTATTG GGCTACTACGACCACATCAACATTCCCTACGCACCGGTATTTATGCGTGAGGCGCAGATTCTGGTTGCGCGCGAGTGGGA ATTCGGCCCTGATGGTGATCTGCCGCGGGTACGCGATTTGCTGGCTAATGGCGACTTGAAGGTTGATGGTCTGTTAACCC ATCACGTCCCGCTCGACCGCATTCAGGCTGCTTATCGCCTGGCCCTGGAAGACCCGGCCTGTTTGAAGGTTGTTGTCACG TGGCCGCAAAACGGTACCGACGCAGCGTAG
Upstream 100 bases:
>100_bases ATTGCAGGCTCAATCAGCAGGTATGGCCAAACCATCATAACACCAACCGGTTCTCTGGGTGAAGATTACGCTGCGGCGTA CTAGAAAGCGGATCGACTGT
Downstream 100 bases:
>100_bases TACTCACTCGCCAAGGAGCAATGCGCATCAGCCTGGAAAGAGAGATGGCTTTATGCCCGCCCATCCAAAAACGAAACAAC CAGGTTCAACAGCACGAATG
Product: alcohol dehydrogenase zinc-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MPIKSRAVVIPKRNTIEIRTVQVNEPKAGDVLIKTAFTSISAGTERMLLDGRLPQPQLLFPVVPGYETVGQVVQVGSKAP KELLGQWVYIGGARCFRGVNAAWGGQSEYITAEHERVVPLGSLDPATGVLLALAATALHGIKIGQIRRSDRVLVLGQGIV GQLAARLAKYAGAQHVAVADRVAVRLQASQADQVIDVTRESLDEAIGEAKVDVLIEATGSMGALSGALPLLANHGRVVLL GYYDHINIPYAPVFMREAQILVAREWEFGPDGDLPRVRDLLANGDLKVDGLLTHHVPLDRIQAAYRLALEDPACLKVVVT WPQNGTDAA
Sequences:
>Translated_329_residues MPIKSRAVVIPKRNTIEIRTVQVNEPKAGDVLIKTAFTSISAGTERMLLDGRLPQPQLLFPVVPGYETVGQVVQVGSKAP KELLGQWVYIGGARCFRGVNAAWGGQSEYITAEHERVVPLGSLDPATGVLLALAATALHGIKIGQIRRSDRVLVLGQGIV GQLAARLAKYAGAQHVAVADRVAVRLQASQADQVIDVTRESLDEAIGEAKVDVLIEATGSMGALSGALPLLANHGRVVLL GYYDHINIPYAPVFMREAQILVAREWEFGPDGDLPRVRDLLANGDLKVDGLLTHHVPLDRIQAAYRLALEDPACLKVVVT WPQNGTDAA >Mature_328_residues PIKSRAVVIPKRNTIEIRTVQVNEPKAGDVLIKTAFTSISAGTERMLLDGRLPQPQLLFPVVPGYETVGQVVQVGSKAPK ELLGQWVYIGGARCFRGVNAAWGGQSEYITAEHERVVPLGSLDPATGVLLALAATALHGIKIGQIRRSDRVLVLGQGIVG QLAARLAKYAGAQHVAVADRVAVRLQASQADQVIDVTRESLDEAIGEAKVDVLIEATGSMGALSGALPLLANHGRVVLLG YYDHINIPYAPVFMREAQILVAREWEFGPDGDLPRVRDLLANGDLKVDGLLTHHVPLDRIQAAYRLALEDPACLKVVVTW PQNGTDAA
Specific function: This protein catalyzes the penultimate step in bacteriochlorophyll a biosynthesis [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082125, Length=350, Percent_Identity=26.8571428571429, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI226510992, Length=323, Percent_Identity=25.3869969040248, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787863, Length=347, Percent_Identity=25.3602305475504, Blast_Score=69, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17562876, Length=323, Percent_Identity=26.625386996904, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002085 - InterPro: IPR005903 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35307; Mature: 35176
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIKSRAVVIPKRNTIEIRTVQVNEPKAGDVLIKTAFTSISAGTERMLLDGRLPQPQLLF CCCCCCEEEECCCCEEEEEEEEECCCCCCCEEEEEEHHHHCCCCCEEEECCCCCCCCEEE PVVPGYETVGQVVQVGSKAPKELLGQWVYIGGARCFRGVNAAWGGQSEYITAEHERVVPL EECCCHHHHHHHHHHCCCCCHHHHCCEEEECCHHHHCCCCCCCCCCCCEEEECCCEEEEC GSLDPATGVLLALAATALHGIKIGQIRRSDRVLVLGQGIVGQLAARLAKYAGAQHVAVAD CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCEEEHHH RVAVRLQASQADQVIDVTRESLDEAIGEAKVDVLIEATGSMGALSGALPLLANHGRVVLL HEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHCCHHHHCCCCCEEEE GYYDHINIPYAPVFMREAQILVAREWEFGPDGDLPRVRDLLANGDLKVDGLLTHHVPLDR EEECCCCCCCCHHEHCCCEEEEEEECCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCHHH IQAAYRLALEDPACLKVVVTWPQNGTDAA HHHHHHHHCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure PIKSRAVVIPKRNTIEIRTVQVNEPKAGDVLIKTAFTSISAGTERMLLDGRLPQPQLLF CCCCCEEEECCCCEEEEEEEEECCCCCCCEEEEEEHHHHCCCCCEEEECCCCCCCCEEE PVVPGYETVGQVVQVGSKAPKELLGQWVYIGGARCFRGVNAAWGGQSEYITAEHERVVPL EECCCHHHHHHHHHHCCCCCHHHHCCEEEECCHHHHCCCCCCCCCCCCEEEECCCEEEEC GSLDPATGVLLALAATALHGIKIGQIRRSDRVLVLGQGIVGQLAARLAKYAGAQHVAVAD CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCEEEHHH RVAVRLQASQADQVIDVTRESLDEAIGEAKVDVLIEATGSMGALSGALPLLANHGRVVLL HEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHCCHHHHCCCCCEEEE GYYDHINIPYAPVFMREAQILVAREWEFGPDGDLPRVRDLLANGDLKVDGLLTHHVPLDR EEECCCCCCCCHHEHCCCEEEEEEECCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCHHH IQAAYRLALEDPACLKVVVTWPQNGTDAA HHHHHHHHCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2555268; 2550757; 8468299 [H]