| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523714
Identifier: 222523714
GI number: 222523714
Start: 500405
End: 501409
Strand: Reverse
Name: 222523714
Synonym: Chy400_0420
Alternate gene names: NA
Gene position: 501409-500405 (Counterclockwise)
Preceding gene: 222523715
Following gene: 222523702
Centisome position: 9.52
GC content: 53.73
Gene sequence:
>1005_bases ATGATTGATGATGCATTTGTGTTCGATGGGGTGTGTCACGTTTTCAATTTTGATAAGTCGAATGCGTTTGGGAAGCCGGG TGAGATGTTTATCGAGCATCTCTATGCGTTCCATCAAGTCTTGAATGCCCCCGGTGAGAAGACGTTGAGCCGCGAAGAGT ATATGCGCGAGTGGCATGTTGATGAAATTGCGCGCATGATCTTCGATGAAAGCCCCACCGATATGATTATCGCCCAGCCT CTACCGCTGACCGATCTGTTTAAGGATGGGTTGTCGAGCTGGGAGCGGTGTGCTGAGATGGCCCGGCGCTATCCTGACCG GGCTGTCTTTTGGGGATCGGTTAATCCGCTAGAGGGTAAAAAGGCGCTTGATCTGATGGAAATTCAGGTCAAAGAGTACG GTGCGCGCGGCTTTAAGCTCTACAATGTTCGCTACGATTATGGTCAGCCGTTCCCCTGGCGGATGGATGACCCACGGGTG GCATTCCCCATTTTCGAGAAGGCGCTGGAGCTGGGTGTGAATATTATCGGTGTCCACAAGGGTGTGCCGCTTGGCCCGCA GCCGGTTGAGCACACGCAGGCGTGGGATATGGATGGTGCAGCGGCCAATTTCCCGGAGATTAACTTTATCATTTTCCACG TCGGTCTGCCGTTTATCGATGAGATTTGCTGGCAACTGGTGCGCTATCCGAACCTCTATGCCTCAATTGCCGCGACGGTG AATTTCGTTGTGCGCTCGCCACGGGTCTTCGCCGAGACGATGGCTAAGTTGCTGTTCTGGTGTGGTGAGGACAAGATTAT TTACGGCGGTGAGACGCCAATCTGGCATCCCCGTGGTGCGCTGAAGGCGTTCTGGGAGTTTGAGCTGCCGGAAGATATTG TGCAGGGCTATGGCTGTGGTCAGTTGACGAAGGAGGCGAAGAAGAAGATTCTGGGTCTGAATCTGGCCCGGTTGCACGGG TTTGATGTCGAGGAGAAGAAGCGGAGTTTGGGAATCGCTGCCTGA
Upstream 100 bases:
>100_bases GGATGTCGGCACAGGCGCGTGAACGGTTGCGTTTGCCACTCGAACAACTTCTGCCGTTACGCGAGGCACGGTTGCGCAGG ACGCAGAAGGAGGAGGCACC
Downstream 100 bases:
>100_bases CAGGGGGAGTCTATTCAGGTAACCTCTCGTGCGTGCAATTGTGGCTGATAAGCAGCTTCGCGTTATGAGACGTGCGGAAC GTAGCTTCCGCACGTCGCTT
Product: amidohydrolase 2
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Metal-Dependent Hydrolase Of TIM-Barrel Fold Protein
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MIDDAFVFDGVCHVFNFDKSNAFGKPGEMFIEHLYAFHQVLNAPGEKTLSREEYMREWHVDEIARMIFDESPTDMIIAQP LPLTDLFKDGLSSWERCAEMARRYPDRAVFWGSVNPLEGKKALDLMEIQVKEYGARGFKLYNVRYDYGQPFPWRMDDPRV AFPIFEKALELGVNIIGVHKGVPLGPQPVEHTQAWDMDGAAANFPEINFIIFHVGLPFIDEICWQLVRYPNLYASIAATV NFVVRSPRVFAETMAKLLFWCGEDKIIYGGETPIWHPRGALKAFWEFELPEDIVQGYGCGQLTKEAKKKILGLNLARLHG FDVEEKKRSLGIAA
Sequences:
>Translated_334_residues MIDDAFVFDGVCHVFNFDKSNAFGKPGEMFIEHLYAFHQVLNAPGEKTLSREEYMREWHVDEIARMIFDESPTDMIIAQP LPLTDLFKDGLSSWERCAEMARRYPDRAVFWGSVNPLEGKKALDLMEIQVKEYGARGFKLYNVRYDYGQPFPWRMDDPRV AFPIFEKALELGVNIIGVHKGVPLGPQPVEHTQAWDMDGAAANFPEINFIIFHVGLPFIDEICWQLVRYPNLYASIAATV NFVVRSPRVFAETMAKLLFWCGEDKIIYGGETPIWHPRGALKAFWEFELPEDIVQGYGCGQLTKEAKKKILGLNLARLHG FDVEEKKRSLGIAA >Mature_334_residues MIDDAFVFDGVCHVFNFDKSNAFGKPGEMFIEHLYAFHQVLNAPGEKTLSREEYMREWHVDEIARMIFDESPTDMIIAQP LPLTDLFKDGLSSWERCAEMARRYPDRAVFWGSVNPLEGKKALDLMEIQVKEYGARGFKLYNVRYDYGQPFPWRMDDPRV AFPIFEKALELGVNIIGVHKGVPLGPQPVEHTQAWDMDGAAANFPEINFIIFHVGLPFIDEICWQLVRYPNLYASIAATV NFVVRSPRVFAETMAKLLFWCGEDKIIYGGETPIWHPRGALKAFWEFELPEDIVQGYGCGQLTKEAKKKILGLNLARLHG FDVEEKKRSLGIAA
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38201; Mature: 38201
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDDAFVFDGVCHVFNFDKSNAFGKPGEMFIEHLYAFHQVLNAPGEKTLSREEYMREWHV CCCCHHHHHCHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCH DEIARMIFDESPTDMIIAQPLPLTDLFKDGLSSWERCAEMARRYPDRAVFWGSVNPLEGK HHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC KALDLMEIQVKEYGARGFKLYNVRYDYGQPFPWRMDDPRVAFPIFEKALELGVNIIGVHK HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECC GVPLGPQPVEHTQAWDMDGAAANFPEINFIIFHVGLPFIDEICWQLVRYPNLYASIAATV CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHH NFVVRSPRVFAETMAKLLFWCGEDKIIYGGETPIWHPRGALKAFWEFELPEDIVQGYGCG HHHHCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHCCCCCHHHHCCCCCC QLTKEAKKKILGLNLARLHGFDVEEKKRSLGIAA HHHHHHHHHHHCCCHHHHCCCCHHHHHHHCCCCC >Mature Secondary Structure MIDDAFVFDGVCHVFNFDKSNAFGKPGEMFIEHLYAFHQVLNAPGEKTLSREEYMREWHV CCCCHHHHHCHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCH DEIARMIFDESPTDMIIAQPLPLTDLFKDGLSSWERCAEMARRYPDRAVFWGSVNPLEGK HHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC KALDLMEIQVKEYGARGFKLYNVRYDYGQPFPWRMDDPRVAFPIFEKALELGVNIIGVHK HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECC GVPLGPQPVEHTQAWDMDGAAANFPEINFIIFHVGLPFIDEICWQLVRYPNLYASIAATV CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHH NFVVRSPRVFAETMAKLLFWCGEDKIIYGGETPIWHPRGALKAFWEFELPEDIVQGYGCG HHHHCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHCCCCCHHHHCCCCCC QLTKEAKKKILGLNLARLHGFDVEEKKRSLGIAA HHHHHHHHHHHCCCHHHHCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA