| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523314
Identifier: 222523314
GI number: 222523314
Start: 13959
End: 15221
Strand: Direct
Name: 222523314
Synonym: Chy400_0012
Alternate gene names: NA
Gene position: 13959-15221 (Clockwise)
Preceding gene: 222523313
Following gene: 222523316
Centisome position: 0.26
GC content: 56.93
Gene sequence:
>1263_bases ATGACCCAACAGCGCGCCGACCGCCGTAACTATGTGCTGGTAACAATCGCCTACTGGGCCGATACGCTCACCGATGGCGC GATTCGGATGCTGGTGTTGTTTTACTTTGCTCAGCTCGGCTATTCGCCGTTTGCGGTAGCCTCGCTCTTTCTGTTCTACG AAATTTTTGGGGTGATTACTAATCTCTTCGGTGGCTATATCGGTGCGCGCTTTGGTCTCAAGCTGACGCTGTTTCTCGGC CTGGCAACCCAACTGGTTGCACTGAGTATGCTGGCTTTTGCTCCACCTTCACTGCTGGTTGTGCCATACGTGATGGCGGC GCAGGCATTGTCGGGGATCGCCAAAGACCTGACCAAGATGTCGTCGAAGAGTGCGGTGAAGCTGGTGGCCGGCACCGGCG AAGGTCAGCTTTACCGCTGGGTCAGTGTGTTGACCGGATCGAAGAATGCGATCAAGGGACTGGGCTTCTTTGTCGGTGCA CTGTTGCTCAGTCTATTCGGCTTCCAGACTGCTCTGATCATGCTGGCAGTGCTGGTGCTGACGGCCCTGGTTGGTGCGGT GAGCACAATCAGTGGCGACCTGGGTGTTGCCAACAAGAAAGCCAAATTCAAGCAGATTTTCTCGCCGAACCGGGCGGTCA ATCTGCTGGCGGCAGCTCGCATTTTTCTCTTCGGGGCGCGCGATGTCTGGTTTGTGGTCGGATTGCCGGTCTTCTTCATC ACCGTTTTAGGCTGGGATTTCTGGCTGGCGGGTGGCTTTATGGCTGCCTGGACTATCGGCTACGGCTTTGTGCAGGCTTC CACACCGGCCCTCATTCGGCGGCGTATCGCCAATGCCCAGGCTCCGGACGGACGTACCGCTATGTGGCTGGCCTTCGCAC TGGCAGCCTTCCCGGCAGGGATTGCCATCACACTGCATGCGGGTCTGATCCCAACGCTGAGTGTAGTTGGTGGTCTGCTC GCCTTTGGGATCATCTTTGCCCTGAATTCGGCTGTACACAGCTACCTGATCCTGGCTTACGCCGACGATGCCAAAGTTGC GATGAACGTTGGCTTCTACTATATGGCAAATGCCCTGGGGCGCCTCACCGGCACAGTTCTCTCTGGCGCACTCTACCAGT GGGGAATGCAGAGCAATCCATTTGGTGGCCTGATCGCATGCCTGTGGGCATCGGCTGGTTTCATTTTAATCGCCGGTTTG TTGTCGATCCGCTTACCAACGCCAACGCGCACGGTCGTCGGCACGTGGAAGGTAGAGGAATAA
Upstream 100 bases:
>100_bases ACGACAATGAATGGGGATACGCCAATCGGTATGTGGAATTAGCGCGAAAGGTTGCCCTGCTCTTATGAAAACAACGCCTT CCACTGAGGCATCGGCGACC
Downstream 100 bases:
>100_bases AGGCGGGATCGCTCATACCTGGCGATCACGCACCAGCGCACAGATGCAATCGGTCCAGGGTGTCGCGGCCTGATTGCCGC GCTGACGAAGATCGATCAGC
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; Facilitator Superfamily Multidrug-Efflux Transporter; Membrane Transporter; Facilitator Superfamily Transporter; Multidrug Efflux Transporter MFS Family; Multidrug-Efflux Transporter; Nonfunctional Facilitator Superfamily Protein; MFS Transporter; Transporter-Like Protein; Permease Of Facilitator Superfamily; Nitric Oxide Reductase Cytochrome B Subunit
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MTQQRADRRNYVLVTIAYWADTLTDGAIRMLVLFYFAQLGYSPFAVASLFLFYEIFGVITNLFGGYIGARFGLKLTLFLG LATQLVALSMLAFAPPSLLVVPYVMAAQALSGIAKDLTKMSSKSAVKLVAGTGEGQLYRWVSVLTGSKNAIKGLGFFVGA LLLSLFGFQTALIMLAVLVLTALVGAVSTISGDLGVANKKAKFKQIFSPNRAVNLLAAARIFLFGARDVWFVVGLPVFFI TVLGWDFWLAGGFMAAWTIGYGFVQASTPALIRRRIANAQAPDGRTAMWLAFALAAFPAGIAITLHAGLIPTLSVVGGLL AFGIIFALNSAVHSYLILAYADDAKVAMNVGFYYMANALGRLTGTVLSGALYQWGMQSNPFGGLIACLWASAGFILIAGL LSIRLPTPTRTVVGTWKVEE
Sequences:
>Translated_420_residues MTQQRADRRNYVLVTIAYWADTLTDGAIRMLVLFYFAQLGYSPFAVASLFLFYEIFGVITNLFGGYIGARFGLKLTLFLG LATQLVALSMLAFAPPSLLVVPYVMAAQALSGIAKDLTKMSSKSAVKLVAGTGEGQLYRWVSVLTGSKNAIKGLGFFVGA LLLSLFGFQTALIMLAVLVLTALVGAVSTISGDLGVANKKAKFKQIFSPNRAVNLLAAARIFLFGARDVWFVVGLPVFFI TVLGWDFWLAGGFMAAWTIGYGFVQASTPALIRRRIANAQAPDGRTAMWLAFALAAFPAGIAITLHAGLIPTLSVVGGLL AFGIIFALNSAVHSYLILAYADDAKVAMNVGFYYMANALGRLTGTVLSGALYQWGMQSNPFGGLIACLWASAGFILIAGL LSIRLPTPTRTVVGTWKVEE >Mature_419_residues TQQRADRRNYVLVTIAYWADTLTDGAIRMLVLFYFAQLGYSPFAVASLFLFYEIFGVITNLFGGYIGARFGLKLTLFLGL ATQLVALSMLAFAPPSLLVVPYVMAAQALSGIAKDLTKMSSKSAVKLVAGTGEGQLYRWVSVLTGSKNAIKGLGFFVGAL LLSLFGFQTALIMLAVLVLTALVGAVSTISGDLGVANKKAKFKQIFSPNRAVNLLAAARIFLFGARDVWFVVGLPVFFIT VLGWDFWLAGGFMAAWTIGYGFVQASTPALIRRRIANAQAPDGRTAMWLAFALAAFPAGIAITLHAGLIPTLSVVGGLLA FGIIFALNSAVHSYLILAYADDAKVAMNVGFYYMANALGRLTGTVLSGALYQWGMQSNPFGGLIACLWASAGFILIAGLL SIRLPTPTRTVVGTWKVEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44870; Mature: 44739
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQRADRRNYVLVTIAYWADTLTDGAIRMLVLFYFAQLGYSPFAVASLFLFYEIFGVIT CCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH NLFGGYIGARFGLKLTLFLGLATQLVALSMLAFAPPSLLVVPYVMAAQALSGIAKDLTKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH SSKSAVKLVAGTGEGQLYRWVSVLTGSKNAIKGLGFFVGALLLSLFGFQTALIMLAVLVL CCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TALVGAVSTISGDLGVANKKAKFKQIFSPNRAVNLLAAARIFLFGARDVWFVVGLPVFFI HHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TVLGWDFWLAGGFMAAWTIGYGFVQASTPALIRRRIANAQAPDGRTAMWLAFALAAFPAG HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC IAITLHAGLIPTLSVVGGLLAFGIIFALNSAVHSYLILAYADDAKVAMNVGFYYMANALG EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHH RLTGTVLSGALYQWGMQSNPFGGLIACLWASAGFILIAGLLSIRLPTPTRTVVGTWKVEE HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEEECC >Mature Secondary Structure TQQRADRRNYVLVTIAYWADTLTDGAIRMLVLFYFAQLGYSPFAVASLFLFYEIFGVIT CCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH NLFGGYIGARFGLKLTLFLGLATQLVALSMLAFAPPSLLVVPYVMAAQALSGIAKDLTKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH SSKSAVKLVAGTGEGQLYRWVSVLTGSKNAIKGLGFFVGALLLSLFGFQTALIMLAVLVL CCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TALVGAVSTISGDLGVANKKAKFKQIFSPNRAVNLLAAARIFLFGARDVWFVVGLPVFFI HHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TVLGWDFWLAGGFMAAWTIGYGFVQASTPALIRRRIANAQAPDGRTAMWLAFALAAFPAG HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC IAITLHAGLIPTLSVVGGLLAFGIIFALNSAVHSYLILAYADDAKVAMNVGFYYMANALG EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHH RLTGTVLSGALYQWGMQSNPFGGLIACLWASAGFILIAGLLSIRLPTPTRTVVGTWKVEE HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA