Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

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The map label for this gene is yfkF [H]

Identifier: 222151893

GI number: 222151893

Start: 1787562

End: 1788728

Strand: Direct

Name: yfkF [H]

Synonym: MCCL_1650

Alternate gene names: 222151893

Gene position: 1787562-1788728 (Clockwise)

Preceding gene: 222151882

Following gene: 222151894

Centisome position: 85.03

GC content: 38.73

Gene sequence:

>1167_bases
ATGTTCAAGAAAAATTTCATCATTTTATCTATCATCGTATCAATTTCCGGAATGACTCAAGGGATGCTGTTGCCGCTCAT
CGCGATTATCTTCGAACACGATAATGTATCGACATTCGTCAACGGACTTCACGCTTCTTCCATATACATCGGAGTCTTTT
TAGCATCATTATTCTTAGAAGGATTACTTAGGAAGTTCGGCTATAAGAACCTTATTATTATAGGCGGAGCTATCATCTTC
TTATCACTCGGATTATTTCCGATACTTGAGAATATGACAATCTGGTTCATATTACGATTGCTCGTCGGGGTTGGAGATAA
TATGCTGCACTTCTCGACACAATCATGGCTTACAGAATCAACACCGAGACATAAACTCGGTCGTATTATTTCAATCTACG
GATTAAGTTTTTCAGCTGGCTTTATGGTCGGACCGTTATTATCTAAACTATATGATATACATGAAGCACTGCCTTTTGTA
GCAAGCAGTATACTCACACTATGCGCCTGCAGTTTAATACTATTACTGAAAAACCAGTATCCTGAAGTTCAGACATCGAA
CATTTCACTTAAAAACACAACTGCAAACTTTGGCAAGGTGATGAAGACGAGCTGGGTCGCATTCTTATTTCCTATGATGT
ATGGTGTGCTGGAAGCATGTTTAAACAGCAATTTCCCAGTCTTCGCTATGAAAAATGGCGTCGATGTAAACTTAATCATC
TTAATCATCCCTGCATACAGTCTAGGTGCGATTCTGTTCCAGGTACCACTCGGTATGATTTCAGATAAGGTTAATCGTAA
TGTGCTGTTATCCATCGTGACATTTGTCGGTGCGTGTATCTTTATATTATGTCAATTCTTTACAAGTAATGGTTATGTAT
TACTTACGCTTTTCTTCATCGCCGGAATCTTTATCGGGTCACTTTATTCACTAGGCGTGACATTGATGACAGAAATTACA
CCGAAAGTATTACTGCCAGCAGGAAATTTAATGTGTGGTCTCATATTCAGTATCGGTAGTATTACAGGACCGATCATCGG
TGGGATGACGATTCAGTTCTCGCATAACACACAATTTTTCAGCTTTATTGCTGTCATACTCTTACTCATCAGTATGGCTA
CAATTTACGATTACAGAAAACGACTGACAATTAGAAATGAGGGATGA

Upstream 100 bases:

>100_bases
CTCCCCTATTCAAAAGCTCATATTAATTTCATATTACCATAGTGAATTCATTTAGGCATCGCTTTAACATTCTGTTACAA
TTAATGTAAGGAGGCATCAT

Downstream 100 bases:

>100_bases
CATGGTCATCAATGAAGCAAAAGCTTTCATAACACAATTCTATAAAGAACAGTGCTTCAGCGAACAATTAATGAAAGCAC
GTATTAAAGACGTAGAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MFKKNFIILSIIVSISGMTQGMLLPLIAIIFEHDNVSTFVNGLHASSIYIGVFLASLFLEGLLRKFGYKNLIIIGGAIIF
LSLGLFPILENMTIWFILRLLVGVGDNMLHFSTQSWLTESTPRHKLGRIISIYGLSFSAGFMVGPLLSKLYDIHEALPFV
ASSILTLCACSLILLLKNQYPEVQTSNISLKNTTANFGKVMKTSWVAFLFPMMYGVLEACLNSNFPVFAMKNGVDVNLII
LIIPAYSLGAILFQVPLGMISDKVNRNVLLSIVTFVGACIFILCQFFTSNGYVLLTLFFIAGIFIGSLYSLGVTLMTEIT
PKVLLPAGNLMCGLIFSIGSITGPIIGGMTIQFSHNTQFFSFIAVILLLISMATIYDYRKRLTIRNEG

Sequences:

>Translated_388_residues
MFKKNFIILSIIVSISGMTQGMLLPLIAIIFEHDNVSTFVNGLHASSIYIGVFLASLFLEGLLRKFGYKNLIIIGGAIIF
LSLGLFPILENMTIWFILRLLVGVGDNMLHFSTQSWLTESTPRHKLGRIISIYGLSFSAGFMVGPLLSKLYDIHEALPFV
ASSILTLCACSLILLLKNQYPEVQTSNISLKNTTANFGKVMKTSWVAFLFPMMYGVLEACLNSNFPVFAMKNGVDVNLII
LIIPAYSLGAILFQVPLGMISDKVNRNVLLSIVTFVGACIFILCQFFTSNGYVLLTLFFIAGIFIGSLYSLGVTLMTEIT
PKVLLPAGNLMCGLIFSIGSITGPIIGGMTIQFSHNTQFFSFIAVILLLISMATIYDYRKRLTIRNEG
>Mature_388_residues
MFKKNFIILSIIVSISGMTQGMLLPLIAIIFEHDNVSTFVNGLHASSIYIGVFLASLFLEGLLRKFGYKNLIIIGGAIIF
LSLGLFPILENMTIWFILRLLVGVGDNMLHFSTQSWLTESTPRHKLGRIISIYGLSFSAGFMVGPLLSKLYDIHEALPFV
ASSILTLCACSLILLLKNQYPEVQTSNISLKNTTANFGKVMKTSWVAFLFPMMYGVLEACLNSNFPVFAMKNGVDVNLII
LIIPAYSLGAILFQVPLGMISDKVNRNVLLSIVTFVGACIFILCQFFTSNGYVLLTLFFIAGIFIGSLYSLGVTLMTEIT
PKVLLPAGNLMCGLIFSIGSITGPIIGGMTIQFSHNTQFFSFIAVILLLISMATIYDYRKRLTIRNEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42719; Mature: 42719

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKNFIILSIIVSISGMTQGMLLPLIAIIFEHDNVSTFVNGLHASSIYIGVFLASLFLE
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GLLRKFGYKNLIIIGGAIIFLSLGLFPILENMTIWFILRLLVGVGDNMLHFSTQSWLTES
HHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHCC
TPRHKLGRIISIYGLSFSAGFMVGPLLSKLYDIHEALPFVASSILTLCACSLILLLKNQY
CCHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEVQTSNISLKNTTANFGKVMKTSWVAFLFPMMYGVLEACLNSNFPVFAMKNGVDVNLII
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEE
LIIPAYSLGAILFQVPLGMISDKVNRNVLLSIVTFVGACIFILCQFFTSNGYVLLTLFFI
EEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AGIFIGSLYSLGVTLMTEITPKVLLPAGNLMCGLIFSIGSITGPIIGGMTIQFSHNTQFF
HHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHHHHHHCCHHHCCEEEEEECCCHHH
SFIAVILLLISMATIYDYRKRLTIRNEG
HHHHHHHHHHHHHHHHHHHHHEEECCCC
>Mature Secondary Structure
MFKKNFIILSIIVSISGMTQGMLLPLIAIIFEHDNVSTFVNGLHASSIYIGVFLASLFLE
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GLLRKFGYKNLIIIGGAIIFLSLGLFPILENMTIWFILRLLVGVGDNMLHFSTQSWLTES
HHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHCC
TPRHKLGRIISIYGLSFSAGFMVGPLLSKLYDIHEALPFVASSILTLCACSLILLLKNQY
CCHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEVQTSNISLKNTTANFGKVMKTSWVAFLFPMMYGVLEACLNSNFPVFAMKNGVDVNLII
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEE
LIIPAYSLGAILFQVPLGMISDKVNRNVLLSIVTFVGACIFILCQFFTSNGYVLLTLFFI
EEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AGIFIGSLYSLGVTLMTEITPKVLLPAGNLMCGLIFSIGSITGPIIGGMTIQFSHNTQFF
HHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHHHHHHCCHHHCCEEEEEECCCHHH
SFIAVILLLISMATIYDYRKRLTIRNEG
HHHHHHHHHHHHHHHHHHHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]