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The map label for this gene is dnaQ [H]

Identifier: 222151870

GI number: 222151870

Start: 1759823

End: 1760716

Strand: Direct

Name: dnaQ [H]

Synonym: MCCL_1627

Alternate gene names: 222151870

Gene position: 1759823-1760716 (Clockwise)

Preceding gene: 222151868

Following gene: 222151873

Centisome position: 83.71

GC content: 37.36

Gene sequence:

>894_bases
ATGAATTCTTTCATTGCATTAGATTTCGAGACTGCAAACCATAATGCTGCATCAATTTGTAGTGTCGGAATGGTTAAAGT
TATCGATAATATGATGACCGAAACTTTCTATACGCTCGTAAATCCCGAAACAAATTTTAATACTTCAAATATAAACGTTC
ATAACATAAAACCTGAAGATGTTACTGCAGCACCTACATTCGAAACCGTCTACCCGCACATGCTGTCATTTATCGGAGAC
TTACCAGTCGTGTGTCACTTTGCACAGTTTGATATGAAAGTACTACATGCATCGATCAAACGTTATCACTTTGAAATGCC
GACGCTACCCTACTTCTGTTCCTGCATTATGGCGAGAGATACCGTTACAAACCACAGCTACAGCTTAAAAAATATGATGA
CCTATTATAACCTGGAATTTCACGGTCATCATCACGCATTAAACGATGCAAAAGCATGTGCCATGATTACAGTGCGATTG
TTGAAGAACTATGAGTCACTCAATCAATATTTAACTTATAAGCGACGCAAGAAATACATTAGCAGCGTGTCGCTTAAGTC
TAAACGTGCACAAATGGCACGTTATCAGACAGATTTGAATCGTATCACGCCTGATACATCTAAAGTAAATAAAGATCACC
TATTCTATAACAAGCGCATCGCAATAACAGGTACACTGCACATGAAGCGCAAGGACATCGTACAGTATATCGTAAATAAC
GGTGGTATATATACAGAAGAGATAGATACCATCGATATCTTTATTATGGGTAAATCTAAGCAAGGGATTGCAAAAAAAGA
GGGTATCGTACGTAACAAAATTGCGCTCGGTAATGAAATTATGCTCATCAATGATGATAAATTGAAGGACTTAATTGCGT
TTTATGACGTATAA

Upstream 100 bases:

>100_bases
ATGTAATATTACTTGCATATCTATTAATCCATTCCCTATTTTTCTAAATATAATTATTAATTTTTCAGAATAAATAAAAT
ATTAATTTAAAGGAGTATTT

Downstream 100 bases:

>100_bases
AAAAGTAGCATTCATATTCGAATGCTACTTTTTCGTTGTTTCTTTAATTGTCTTCTTAATACTCTGCTTCGTTACAGGAC
GCTCTAATTTGTGGTCGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MNSFIALDFETANHNAASICSVGMVKVIDNMMTETFYTLVNPETNFNTSNINVHNIKPEDVTAAPTFETVYPHMLSFIGD
LPVVCHFAQFDMKVLHASIKRYHFEMPTLPYFCSCIMARDTVTNHSYSLKNMMTYYNLEFHGHHHALNDAKACAMITVRL
LKNYESLNQYLTYKRRKKYISSVSLKSKRAQMARYQTDLNRITPDTSKVNKDHLFYNKRIAITGTLHMKRKDIVQYIVNN
GGIYTEEIDTIDIFIMGKSKQGIAKKEGIVRNKIALGNEIMLINDDKLKDLIAFYDV

Sequences:

>Translated_297_residues
MNSFIALDFETANHNAASICSVGMVKVIDNMMTETFYTLVNPETNFNTSNINVHNIKPEDVTAAPTFETVYPHMLSFIGD
LPVVCHFAQFDMKVLHASIKRYHFEMPTLPYFCSCIMARDTVTNHSYSLKNMMTYYNLEFHGHHHALNDAKACAMITVRL
LKNYESLNQYLTYKRRKKYISSVSLKSKRAQMARYQTDLNRITPDTSKVNKDHLFYNKRIAITGTLHMKRKDIVQYIVNN
GGIYTEEIDTIDIFIMGKSKQGIAKKEGIVRNKIALGNEIMLINDDKLKDLIAFYDV
>Mature_297_residues
MNSFIALDFETANHNAASICSVGMVKVIDNMMTETFYTLVNPETNFNTSNINVHNIKPEDVTAAPTFETVYPHMLSFIGD
LPVVCHFAQFDMKVLHASIKRYHFEMPTLPYFCSCIMARDTVTNHSYSLKNMMTYYNLEFHGHHHALNDAKACAMITVRL
LKNYESLNQYLTYKRRKKYISSVSLKSKRAQMARYQTDLNRITPDTSKVNKDHLFYNKRIAITGTLHMKRKDIVQYIVNN
GGIYTEEIDTIDIFIMGKSKQGIAKKEGIVRNKIALGNEIMLINDDKLKDLIAFYDV

Specific function: DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease [H]

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006054
- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00929 Exonuc_X-T [H]

EC number: =2.7.7.7 [H]

Molecular weight: Translated: 34182; Mature: 34182

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSFIALDFETANHNAASICSVGMVKVIDNMMTETFYTLVNPETNFNTSNINVHNIKPED
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEECCCCC
VTAAPTFETVYPHMLSFIGDLPVVCHFAQFDMKVLHASIKRYHFEMPTLPYFCSCIMARD
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
TVTNHSYSLKNMMTYYNLEFHGHHHALNDAKACAMITVRLLKNYESLNQYLTYKRRKKYI
HHCCCCHHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSVSLKSKRAQMARYQTDLNRITPDTSKVNKDHLFYNKRIAITGTLHMKRKDIVQYIVNN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECEEEEEEEEEHHHHHHHHHHHHC
GGIYTEEIDTIDIFIMGKSKQGIAKKEGIVRNKIALGNEIMLINDDKLKDLIAFYDV
CCEEEEECCEEEEEEEECCCCCCHHHCCCHHHHEECCCEEEEEECHHHHHHHHHHCC
>Mature Secondary Structure
MNSFIALDFETANHNAASICSVGMVKVIDNMMTETFYTLVNPETNFNTSNINVHNIKPED
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEECCCCC
VTAAPTFETVYPHMLSFIGDLPVVCHFAQFDMKVLHASIKRYHFEMPTLPYFCSCIMARD
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
TVTNHSYSLKNMMTYYNLEFHGHHHALNDAKACAMITVRLLKNYESLNQYLTYKRRKKYI
HHCCCCHHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSVSLKSKRAQMARYQTDLNRITPDTSKVNKDHLFYNKRIAITGTLHMKRKDIVQYIVNN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECEEEEEEEEEHHHHHHHHHHHHC
GGIYTEEIDTIDIFIMGKSKQGIAKKEGIVRNKIALGNEIMLINDDKLKDLIAFYDV
CCEEEEECCEEEEEEEECCCCCCHHHCCCHHHHEECCCEEEEEECHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]