Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

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The map label for this gene is 222151862

Identifier: 222151862

GI number: 222151862

Start: 1750942

End: 1751931

Strand: Direct

Name: 222151862

Synonym: MCCL_1619

Alternate gene names: NA

Gene position: 1750942-1751931 (Clockwise)

Preceding gene: 222151856

Following gene: 222151863

Centisome position: 83.29

GC content: 36.87

Gene sequence:

>990_bases
ATGAAAATTAACTGGTTCAAGAAATTAATCGGTGCAAGAACAATCAAAACAGGGCTTGCGACGTTTTTGACTGCATTAAT
ATGTCAATTATTAAATTTACCTGCAATCTTTGCAGTTATTACATCAATCGTTTCTATTGAACCGACTGCCCGCGCTTCAT
TGAAAAAGGCATTTGTCAGATTTCCTGCATCAATACTCGGAGCATTTATCGCAGTTACAAGTACATATTTCTTAGGCGAT
TCGCCTTTAAGCTATAGTATCGCTGCAACCGCAACAATATTCGTATGCTATAAACTGAAACTCTATGACGGTCTCCTTGT
AGCAAGTCTTACGGCTGTAGCGATGGTACCAAACATTCATCAGGACTTTACGTTTAATTTCTTCTCAAGGCTTGCTACAA
CGACAATCGGTCTAACAACAGCTGGTATCGTTAACTTCTTTGTGATGCCACCGAAATATCATATACAAATCGCCCAACTA
CTCGATGCATTAGAGTCGAAGTTGATGCACATGCTATCTTTACGTGTAACTGAAATTAATTCTGGATTGTCTGATCTAAG
TAGTGCTACCCCACTTGTAGAAGAATCGAATAAACTGATTAATAAAATCGATACGTTGCTGCAATATCAAAAAGAAGAAC
TTCAATTTCATGAAGATAAAGCGATTAAATATGAAATTACACAGTTGAAACATCGTCTTGATGTTAATAGACTCATTCAG
CTTCATGTGAATCAAATGATTTTATTACCGGATGGGACATATTTTACGTTAACTGTTCAGGAAAAAGAAGCGCTGAATCA
TTTAGTTAATGCGTTCAAACAGTTTGGAGAGAATCGCACATATACGCCAGACAGAAAAGCACTCAGCCTGCTTAAGATGA
GCGTGAAGCATTTGACAGAGTTTGATGATAATCAAATGCGCAGTCATTACATCTATGAAATATTGATGATTAACAGATTA
CTGATGGATCACCCGAATAGAGTGAAATAA

Upstream 100 bases:

>100_bases
TTAAGGATATGTATTGATTATAAGGTATAAATTCAATATCATATATTCATCACTGTTTATTATAACAGACTCAAACTATT
ACACAATTGGAATGATTACA

Downstream 100 bases:

>100_bases
AAATACGGAACGTCTCGTTGTAGACGTTCCGTATTTTTATGGGGAGAATATTATATGAATTTCAGAGGATTGGCCACTCA
CAGATACTTTATGTGTGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MKINWFKKLIGARTIKTGLATFLTALICQLLNLPAIFAVITSIVSIEPTARASLKKAFVRFPASILGAFIAVTSTYFLGD
SPLSYSIAATATIFVCYKLKLYDGLLVASLTAVAMVPNIHQDFTFNFFSRLATTTIGLTTAGIVNFFVMPPKYHIQIAQL
LDALESKLMHMLSLRVTEINSGLSDLSSATPLVEESNKLINKIDTLLQYQKEELQFHEDKAIKYEITQLKHRLDVNRLIQ
LHVNQMILLPDGTYFTLTVQEKEALNHLVNAFKQFGENRTYTPDRKALSLLKMSVKHLTEFDDNQMRSHYIYEILMINRL
LMDHPNRVK

Sequences:

>Translated_329_residues
MKINWFKKLIGARTIKTGLATFLTALICQLLNLPAIFAVITSIVSIEPTARASLKKAFVRFPASILGAFIAVTSTYFLGD
SPLSYSIAATATIFVCYKLKLYDGLLVASLTAVAMVPNIHQDFTFNFFSRLATTTIGLTTAGIVNFFVMPPKYHIQIAQL
LDALESKLMHMLSLRVTEINSGLSDLSSATPLVEESNKLINKIDTLLQYQKEELQFHEDKAIKYEITQLKHRLDVNRLIQ
LHVNQMILLPDGTYFTLTVQEKEALNHLVNAFKQFGENRTYTPDRKALSLLKMSVKHLTEFDDNQMRSHYIYEILMINRL
LMDHPNRVK
>Mature_329_residues
MKINWFKKLIGARTIKTGLATFLTALICQLLNLPAIFAVITSIVSIEPTARASLKKAFVRFPASILGAFIAVTSTYFLGD
SPLSYSIAATATIFVCYKLKLYDGLLVASLTAVAMVPNIHQDFTFNFFSRLATTTIGLTTAGIVNFFVMPPKYHIQIAQL
LDALESKLMHMLSLRVTEINSGLSDLSSATPLVEESNKLINKIDTLLQYQKEELQFHEDKAIKYEITQLKHRLDVNRLIQ
LHVNQMILLPDGTYFTLTVQEKEALNHLVNAFKQFGENRTYTPDRKALSLLKMSVKHLTEFDDNQMRSHYIYEILMINRL
LMDHPNRVK

Specific function: Unknown

COG id: COG4129

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0421 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010343 [H]

Pfam domain/function: PF06081 DUF939 [H]

EC number: NA

Molecular weight: Translated: 37291; Mature: 37291

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINWFKKLIGARTIKTGLATFLTALICQLLNLPAIFAVITSIVSIEPTARASLKKAFVR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
FPASILGAFIAVTSTYFLGDSPLSYSIAATATIFVCYKLKLYDGLLVASLTAVAMVPNIH
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QDFTFNFFSRLATTTIGLTTAGIVNFFVMPPKYHIQIAQLLDALESKLMHMLSLRVTEIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGLSDLSSATPLVEESNKLINKIDTLLQYQKEELQFHEDKAIKYEITQLKHRLDVNRLIQ
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LHVNQMILLPDGTYFTLTVQEKEALNHLVNAFKQFGENRTYTPDRKALSLLKMSVKHLTE
HHHCEEEEECCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
FDDNQMRSHYIYEILMINRLLMDHPNRVK
CCCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKINWFKKLIGARTIKTGLATFLTALICQLLNLPAIFAVITSIVSIEPTARASLKKAFVR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
FPASILGAFIAVTSTYFLGDSPLSYSIAATATIFVCYKLKLYDGLLVASLTAVAMVPNIH
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QDFTFNFFSRLATTTIGLTTAGIVNFFVMPPKYHIQIAQLLDALESKLMHMLSLRVTEIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGLSDLSSATPLVEESNKLINKIDTLLQYQKEELQFHEDKAIKYEITQLKHRLDVNRLIQ
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LHVNQMILLPDGTYFTLTVQEKEALNHLVNAFKQFGENRTYTPDRKALSLLKMSVKHLTE
HHHCEEEEECCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
FDDNQMRSHYIYEILMINRLLMDHPNRVK
CCCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA