| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222151862
Identifier: 222151862
GI number: 222151862
Start: 1750942
End: 1751931
Strand: Direct
Name: 222151862
Synonym: MCCL_1619
Alternate gene names: NA
Gene position: 1750942-1751931 (Clockwise)
Preceding gene: 222151856
Following gene: 222151863
Centisome position: 83.29
GC content: 36.87
Gene sequence:
>990_bases ATGAAAATTAACTGGTTCAAGAAATTAATCGGTGCAAGAACAATCAAAACAGGGCTTGCGACGTTTTTGACTGCATTAAT ATGTCAATTATTAAATTTACCTGCAATCTTTGCAGTTATTACATCAATCGTTTCTATTGAACCGACTGCCCGCGCTTCAT TGAAAAAGGCATTTGTCAGATTTCCTGCATCAATACTCGGAGCATTTATCGCAGTTACAAGTACATATTTCTTAGGCGAT TCGCCTTTAAGCTATAGTATCGCTGCAACCGCAACAATATTCGTATGCTATAAACTGAAACTCTATGACGGTCTCCTTGT AGCAAGTCTTACGGCTGTAGCGATGGTACCAAACATTCATCAGGACTTTACGTTTAATTTCTTCTCAAGGCTTGCTACAA CGACAATCGGTCTAACAACAGCTGGTATCGTTAACTTCTTTGTGATGCCACCGAAATATCATATACAAATCGCCCAACTA CTCGATGCATTAGAGTCGAAGTTGATGCACATGCTATCTTTACGTGTAACTGAAATTAATTCTGGATTGTCTGATCTAAG TAGTGCTACCCCACTTGTAGAAGAATCGAATAAACTGATTAATAAAATCGATACGTTGCTGCAATATCAAAAAGAAGAAC TTCAATTTCATGAAGATAAAGCGATTAAATATGAAATTACACAGTTGAAACATCGTCTTGATGTTAATAGACTCATTCAG CTTCATGTGAATCAAATGATTTTATTACCGGATGGGACATATTTTACGTTAACTGTTCAGGAAAAAGAAGCGCTGAATCA TTTAGTTAATGCGTTCAAACAGTTTGGAGAGAATCGCACATATACGCCAGACAGAAAAGCACTCAGCCTGCTTAAGATGA GCGTGAAGCATTTGACAGAGTTTGATGATAATCAAATGCGCAGTCATTACATCTATGAAATATTGATGATTAACAGATTA CTGATGGATCACCCGAATAGAGTGAAATAA
Upstream 100 bases:
>100_bases TTAAGGATATGTATTGATTATAAGGTATAAATTCAATATCATATATTCATCACTGTTTATTATAACAGACTCAAACTATT ACACAATTGGAATGATTACA
Downstream 100 bases:
>100_bases AAATACGGAACGTCTCGTTGTAGACGTTCCGTATTTTTATGGGGAGAATATTATATGAATTTCAGAGGATTGGCCACTCA CAGATACTTTATGTGTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MKINWFKKLIGARTIKTGLATFLTALICQLLNLPAIFAVITSIVSIEPTARASLKKAFVRFPASILGAFIAVTSTYFLGD SPLSYSIAATATIFVCYKLKLYDGLLVASLTAVAMVPNIHQDFTFNFFSRLATTTIGLTTAGIVNFFVMPPKYHIQIAQL LDALESKLMHMLSLRVTEINSGLSDLSSATPLVEESNKLINKIDTLLQYQKEELQFHEDKAIKYEITQLKHRLDVNRLIQ LHVNQMILLPDGTYFTLTVQEKEALNHLVNAFKQFGENRTYTPDRKALSLLKMSVKHLTEFDDNQMRSHYIYEILMINRL LMDHPNRVK
Sequences:
>Translated_329_residues MKINWFKKLIGARTIKTGLATFLTALICQLLNLPAIFAVITSIVSIEPTARASLKKAFVRFPASILGAFIAVTSTYFLGD SPLSYSIAATATIFVCYKLKLYDGLLVASLTAVAMVPNIHQDFTFNFFSRLATTTIGLTTAGIVNFFVMPPKYHIQIAQL LDALESKLMHMLSLRVTEINSGLSDLSSATPLVEESNKLINKIDTLLQYQKEELQFHEDKAIKYEITQLKHRLDVNRLIQ LHVNQMILLPDGTYFTLTVQEKEALNHLVNAFKQFGENRTYTPDRKALSLLKMSVKHLTEFDDNQMRSHYIYEILMINRL LMDHPNRVK >Mature_329_residues MKINWFKKLIGARTIKTGLATFLTALICQLLNLPAIFAVITSIVSIEPTARASLKKAFVRFPASILGAFIAVTSTYFLGD SPLSYSIAATATIFVCYKLKLYDGLLVASLTAVAMVPNIHQDFTFNFFSRLATTTIGLTTAGIVNFFVMPPKYHIQIAQL LDALESKLMHMLSLRVTEINSGLSDLSSATPLVEESNKLINKIDTLLQYQKEELQFHEDKAIKYEITQLKHRLDVNRLIQ LHVNQMILLPDGTYFTLTVQEKEALNHLVNAFKQFGENRTYTPDRKALSLLKMSVKHLTEFDDNQMRSHYIYEILMINRL LMDHPNRVK
Specific function: Unknown
COG id: COG4129
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0421 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010343 [H]
Pfam domain/function: PF06081 DUF939 [H]
EC number: NA
Molecular weight: Translated: 37291; Mature: 37291
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINWFKKLIGARTIKTGLATFLTALICQLLNLPAIFAVITSIVSIEPTARASLKKAFVR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHH FPASILGAFIAVTSTYFLGDSPLSYSIAATATIFVCYKLKLYDGLLVASLTAVAMVPNIH CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QDFTFNFFSRLATTTIGLTTAGIVNFFVMPPKYHIQIAQLLDALESKLMHMLSLRVTEIN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGLSDLSSATPLVEESNKLINKIDTLLQYQKEELQFHEDKAIKYEITQLKHRLDVNRLIQ CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LHVNQMILLPDGTYFTLTVQEKEALNHLVNAFKQFGENRTYTPDRKALSLLKMSVKHLTE HHHCEEEEECCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH FDDNQMRSHYIYEILMINRLLMDHPNRVK CCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKINWFKKLIGARTIKTGLATFLTALICQLLNLPAIFAVITSIVSIEPTARASLKKAFVR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHH FPASILGAFIAVTSTYFLGDSPLSYSIAATATIFVCYKLKLYDGLLVASLTAVAMVPNIH CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QDFTFNFFSRLATTTIGLTTAGIVNFFVMPPKYHIQIAQLLDALESKLMHMLSLRVTEIN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGLSDLSSATPLVEESNKLINKIDTLLQYQKEELQFHEDKAIKYEITQLKHRLDVNRLIQ CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LHVNQMILLPDGTYFTLTVQEKEALNHLVNAFKQFGENRTYTPDRKALSLLKMSVKHLTE HHHCEEEEECCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH FDDNQMRSHYIYEILMINRLLMDHPNRVK CCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA