Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

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The map label for this gene is ytiB [H]

Identifier: 222151856

GI number: 222151856

Start: 1746651

End: 1747229

Strand: Direct

Name: ytiB [H]

Synonym: MCCL_1613

Alternate gene names: 222151856

Gene position: 1746651-1747229 (Clockwise)

Preceding gene: 222151855

Following gene: 222151862

Centisome position: 83.08

GC content: 38.86

Gene sequence:

>579_bases
TTGACTTTATTATCAAACATGCTGGAATTTAATAAGAAGTTTGTTGAAAACAAAGATTATACACAATATGAAACATCTAA
AGTACCAGACATGAAGGCTGTGCTATTAACATGTATGGATACAAGGTTACAAGAATTATCAACGAAAGCACTTGGGCTTA
AGAACGGCGATGTTAAAACCGTTAAGAATGCCGGCGCTACAATCACACACCCTTATGGTTCTACGATGCGTAGCTTACTT
GTTGGCATTTATGCATTAGGTGCTGAAGAGATTATTATTATGGGGCATAAGGATTGTGGGATGGGTGGTCTTGATGTTGA
TAAAGTTAAATCAACCATGATCGGTCGCGGTATTAAGCAAGAAGTGATGGATACGATTATTCACTCTGGTATCGACGTAG
ACCATTTCTTAAGCGGCTTTAACGATGTGAACGAGAACGTACGCGAAAACGTTAAAATGGTTTATAATCATCCACTATTC
GATCGCTCAGTACCTGTACATGGACTCGTCATCGAACCTCATACCGGTGAAGTAGAACTGCTGATAAATGGTTATGATAA
TGTAGAAACAGAACGCTAG

Upstream 100 bases:

>100_bases
TATTTAACAGGATTTATCATTATTATTGGTTCACAGATTAATGCTATAATTCATGAAAAGAAACTAAGTTCTAATCAATA
GTAATGAAAGAGGGATAACG

Downstream 100 bases:

>100_bases
AAGAGTGAGGTGCGGACATCCGCATCTCACTCTTTTTCATTCTATTAAATCATGTTGAAATGCATAGATTACTGCTTGTG
TTCTATCCTGTACTTCAAGT

Product: carbonic anhydrase

Products: NA

Alternate protein names: Carbonate dehydratase [H]

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MTLLSNMLEFNKKFVENKDYTQYETSKVPDMKAVLLTCMDTRLQELSTKALGLKNGDVKTVKNAGATITHPYGSTMRSLL
VGIYALGAEEIIIMGHKDCGMGGLDVDKVKSTMIGRGIKQEVMDTIIHSGIDVDHFLSGFNDVNENVRENVKMVYNHPLF
DRSVPVHGLVIEPHTGEVELLINGYDNVETER

Sequences:

>Translated_192_residues
MTLLSNMLEFNKKFVENKDYTQYETSKVPDMKAVLLTCMDTRLQELSTKALGLKNGDVKTVKNAGATITHPYGSTMRSLL
VGIYALGAEEIIIMGHKDCGMGGLDVDKVKSTMIGRGIKQEVMDTIIHSGIDVDHFLSGFNDVNENVRENVKMVYNHPLF
DRSVPVHGLVIEPHTGEVELLINGYDNVETER
>Mature_191_residues
TLLSNMLEFNKKFVENKDYTQYETSKVPDMKAVLLTCMDTRLQELSTKALGLKNGDVKTVKNAGATITHPYGSTMRSLLV
GIYALGAEEIIIMGHKDCGMGGLDVDKVKSTMIGRGIKQEVMDTIIHSGIDVDHFLSGFNDVNENVRENVKMVYNHPLFD
RSVPVHGLVIEPHTGEVELLINGYDNVETER

Specific function: Reversible hydration of carbon dioxide [H]

COG id: COG0288

COG function: function code P; Carbonic anhydrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-class carbonic anhydrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001765 [H]

Pfam domain/function: PF00484 Pro_CA [H]

EC number: =4.2.1.1 [H]

Molecular weight: Translated: 21360; Mature: 21229

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLSNMLEFNKKFVENKDYTQYETSKVPDMKAVLLTCMDTRLQELSTKALGLKNGDVKT
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
VKNAGATITHPYGSTMRSLLVGIYALGAEEIIIMGHKDCGMGGLDVDKVKSTMIGRGIKQ
HHCCCCEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCHHH
EVMDTIIHSGIDVDHFLSGFNDVNENVRENVKMVYNHPLFDRSVPVHGLVIEPHTGEVEL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEE
LINGYDNVETER
EEECCCCCCCCC
>Mature Secondary Structure 
TLLSNMLEFNKKFVENKDYTQYETSKVPDMKAVLLTCMDTRLQELSTKALGLKNGDVKT
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
VKNAGATITHPYGSTMRSLLVGIYALGAEEIIIMGHKDCGMGGLDVDKVKSTMIGRGIKQ
HHCCCCEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCHHH
EVMDTIIHSGIDVDHFLSGFNDVNENVRENVKMVYNHPLFDRSVPVHGLVIEPHTGEVEL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEE
LINGYDNVETER
EEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]