| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is yhaJ [H]
Identifier: 222151802
GI number: 222151802
Start: 1680708
End: 1681283
Strand: Direct
Name: yhaJ [H]
Synonym: MCCL_1557
Alternate gene names: 222151802
Gene position: 1680708-1681283 (Clockwise)
Preceding gene: 222151801
Following gene: 222151803
Centisome position: 79.95
GC content: 32.81
Gene sequence:
>576_bases ATGTATTTATGTAATAAAAATTTTAATATCAGATCGACATACGGAATCCAGAGAATCATGCTCATTTCAGCATTACTTGG AATTATTGTTTACATTGTCAGCTTTGAAATTTTCTCCTCTATATTCGGGAAAAAATTCTCAGATGACAATTTTTTATTAT TCTTAATCAGTCTGATTTGTCTCTATCCTATCCATAAATCATTGCATATGCTGCCCTTTATATACGATACGAAATCATTA ATTATACAGAAGACAACGAAATCCAGATTTTTTCCGCTCATTAATACACGCGTGAATCATCCGGTCCATAAAGTACATTT TGCGATTGCATTACTCTGCCCTGTTGTCATCATTTCAGTGATAGCACTTATATGCGCAGTTGTATACCCAATGTTCGCCC ATTACTTCCTATTTATATTTGCGGTGAATATCGGATTATCATTTATAGATTTTGTATATTTACGTTATCTATTCAATACT CCACAGTGTTCCTATGTTGAAGAGCGTAAATACGGATTTGAAGTTTTGAGTAAACACGATCTACCGTCAGACTTTTATCA TTCAGATGTAAGATAA
Upstream 100 bases:
>100_bases CTTGAAAAAAGTCACGATGACCTGTTAAAAATATTACTTGACGAAAACAATGAAGATAATGCATAATTGCTAGGTAAATT AACCCAGTAAGGAGATTGCC
Downstream 100 bases:
>100_bases ATGTATTCTAAATCATTTTATGTTAGAATTTATCATTAGTTAGAACATTTACTAAACAGTGCATTTAAAAGGAGCAGTAT TATGACAAACTTAAAGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MYLCNKNFNIRSTYGIQRIMLISALLGIIVYIVSFEIFSSIFGKKFSDDNFLLFLISLICLYPIHKSLHMLPFIYDTKSL IIQKTTKSRFFPLINTRVNHPVHKVHFAIALLCPVVIISVIALICAVVYPMFAHYFLFIFAVNIGLSFIDFVYLRYLFNT PQCSYVEERKYGFEVLSKHDLPSDFYHSDVR
Sequences:
>Translated_191_residues MYLCNKNFNIRSTYGIQRIMLISALLGIIVYIVSFEIFSSIFGKKFSDDNFLLFLISLICLYPIHKSLHMLPFIYDTKSL IIQKTTKSRFFPLINTRVNHPVHKVHFAIALLCPVVIISVIALICAVVYPMFAHYFLFIFAVNIGLSFIDFVYLRYLFNT PQCSYVEERKYGFEVLSKHDLPSDFYHSDVR >Mature_191_residues MYLCNKNFNIRSTYGIQRIMLISALLGIIVYIVSFEIFSSIFGKKFSDDNFLLFLISLICLYPIHKSLHMLPFIYDTKSL IIQKTTKSRFFPLINTRVNHPVHKVHFAIALLCPVVIISVIALICAVVYPMFAHYFLFIFAVNIGLSFIDFVYLRYLFNT PQCSYVEERKYGFEVLSKHDLPSDFYHSDVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021683 [H]
Pfam domain/function: PF11667 DUF3267 [H]
EC number: NA
Molecular weight: Translated: 22304; Mature: 22304
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLCNKNFNIRSTYGIQRIMLISALLGIIVYIVSFEIFSSIFGKKFSDDNFLLFLISLIC CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LYPIHKSLHMLPFIYDTKSLIIQKTTKSRFFPLINTRVNHPVHKVHFAIALLCPVVIISV HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH IALICAVVYPMFAHYFLFIFAVNIGLSFIDFVYLRYLFNTPQCSYVEERKYGFEVLSKHD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC LPSDFYHSDVR CCCHHHCCCCC >Mature Secondary Structure MYLCNKNFNIRSTYGIQRIMLISALLGIIVYIVSFEIFSSIFGKKFSDDNFLLFLISLIC CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LYPIHKSLHMLPFIYDTKSLIIQKTTKSRFFPLINTRVNHPVHKVHFAIALLCPVVIISV HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH IALICAVVYPMFAHYFLFIFAVNIGLSFIDFVYLRYLFNTPQCSYVEERKYGFEVLSKHD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC LPSDFYHSDVR CCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]