| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222151725
Identifier: 222151725
GI number: 222151725
Start: 1599921
End: 1600598
Strand: Direct
Name: 222151725
Synonym: MCCL_1478
Alternate gene names: NA
Gene position: 1599921-1600598 (Clockwise)
Preceding gene: 222151724
Following gene: 222151726
Centisome position: 76.1
GC content: 27.29
Gene sequence:
>678_bases ATGAGTAATTTTAATTTGGATATCTATATCGAAAAGGAAATTAATAAGTATTTAGATACACATATATATCCTCTTCTAGA GAAAGAATTTGGATTAGTATTTAATAGAGTTACAGATATGAACTTACAACACGCTGGAGTAGATACTGTTGGCAAACATA AACTATTTAATAAAAAATTAAATATAGATGAAAAAACAGCATCACATCATTTTGCTAATTCGATTAATGATACAGGTCTC CCTACCTTTGCTTTGGAACTTTCTTATTTTAAATATAACAAAGAAAAAGTTGGATGGTTATTTAATCCTAAATATAGTAA AACAGATGCTTACTTATTTAGCTGGGGTTGGCGCAACTCTGAAGAAAAAGATTGGAAGACCATAAAATATAATGATATCG TGCAAATGGAATCTGTATTGGTTTTAAAGAAAGACTTGATTAAATATTTAGATAAGCATTATGACTTTAATTTAACGAAC TATGAGTCATTCATTGATAATAATTCGAACAGTAATAGTCATAAGTATTACATTAAAGAAAGTAAAGGACCATACATATA TAATTCAGGCGAAAAATATAATGAACGTCCTATCAACTTAGTATTTCCAAAACACGAACTCATTAAGATTTCTAAATTTC ACACAATACATAAAATAGAAGGTGATCAAAATAGCTAA
Upstream 100 bases:
>100_bases TTACGCAATTAAATCTTTTTTAGTCTACCAATTGATGGTAGACTTTTTTATTTGAGAAAAATATACTTGTAATAAGTAAC CTCGATAGGAGATGATTAAT
Downstream 100 bases:
>100_bases ATTTGAATACGAAACGGTCAACGAATTGATAATGTATGCAAAAGAAGCAGAAGGTAAATATTTGTATGAAATTGATAAGA AAGATATGTTGGAGAATACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MSNFNLDIYIEKEINKYLDTHIYPLLEKEFGLVFNRVTDMNLQHAGVDTVGKHKLFNKKLNIDEKTASHHFANSINDTGL PTFALELSYFKYNKEKVGWLFNPKYSKTDAYLFSWGWRNSEEKDWKTIKYNDIVQMESVLVLKKDLIKYLDKHYDFNLTN YESFIDNNSNSNSHKYYIKESKGPYIYNSGEKYNERPINLVFPKHELIKISKFHTIHKIEGDQNS
Sequences:
>Translated_225_residues MSNFNLDIYIEKEINKYLDTHIYPLLEKEFGLVFNRVTDMNLQHAGVDTVGKHKLFNKKLNIDEKTASHHFANSINDTGL PTFALELSYFKYNKEKVGWLFNPKYSKTDAYLFSWGWRNSEEKDWKTIKYNDIVQMESVLVLKKDLIKYLDKHYDFNLTN YESFIDNNSNSNSHKYYIKESKGPYIYNSGEKYNERPINLVFPKHELIKISKFHTIHKIEGDQNS >Mature_224_residues SNFNLDIYIEKEINKYLDTHIYPLLEKEFGLVFNRVTDMNLQHAGVDTVGKHKLFNKKLNIDEKTASHHFANSINDTGLP TFALELSYFKYNKEKVGWLFNPKYSKTDAYLFSWGWRNSEEKDWKTIKYNDIVQMESVLVLKKDLIKYLDKHYDFNLTNY ESFIDNNSNSNSHKYYIKESKGPYIYNSGEKYNERPINLVFPKHELIKISKFHTIHKIEGDQNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26730; Mature: 26599
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFNLDIYIEKEINKYLDTHIYPLLEKEFGLVFNRVTDMNLQHAGVDTVGKHKLFNKKL CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCC NIDEKTASHHFANSINDTGLPTFALELSYFKYNKEKVGWLFNPKYSKTDAYLFSWGWRNS CCCHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCEEECCCCCCCCEEEEEECCCCC EEKDWKTIKYNDIVQMESVLVLKKDLIKYLDKHYDFNLTNYESFIDNNSNSNSHKYYIKE CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCEEEEEEE SKGPYIYNSGEKYNERPINLVFPKHELIKISKFHTIHKIEGDQNS CCCCEEECCCCCCCCCCEEEEECCHHHEEEEHHEEEEEECCCCCC >Mature Secondary Structure SNFNLDIYIEKEINKYLDTHIYPLLEKEFGLVFNRVTDMNLQHAGVDTVGKHKLFNKKL CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCC NIDEKTASHHFANSINDTGLPTFALELSYFKYNKEKVGWLFNPKYSKTDAYLFSWGWRNS CCCHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCEEECCCCCCCCEEEEEECCCCC EEKDWKTIKYNDIVQMESVLVLKKDLIKYLDKHYDFNLTNYESFIDNNSNSNSHKYYIKE CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCEEEEEEE SKGPYIYNSGEKYNERPINLVFPKHELIKISKFHTIHKIEGDQNS CCCCEEECCCCCCCCCCEEEEECCHHHEEEEHHEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA