| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222151712
Identifier: 222151712
GI number: 222151712
Start: 1585489
End: 1586349
Strand: Direct
Name: 222151712
Synonym: MCCL_1465
Alternate gene names: NA
Gene position: 1585489-1586349 (Clockwise)
Preceding gene: 222151711
Following gene: 222151714
Centisome position: 75.42
GC content: 36.12
Gene sequence:
>861_bases ATGAAATCTAGACAGTTATTATCACTATTACTCGGTTCTACTTTGATCTTTACTGCTTGTGGACAAGAGACAAAGAAAAC AGAAGATACTAAATCTGAAGAAAAGAAAGCTGAAACCTCTACTGAATCTAAATCTTCTGAAACCGCATCTGAAAAAAAAT CATCAGAAGTTAAAGATGCAGAAGCGTTAGTTGCAAAGGCTCAAGAAAAGGGGCAGGATATAAAAAGTTATCATGCAAAC CTTGATACTCAGTTAAAATCAGGTAGCGATACAAGCAATGTAAAGATGGAAATGTCTGTGGATGATGCCGAAAGAACTAA GATTAGTACGGATATGCAGAATCAATCGATGGATATGTATATATTCGATAAGAAAGTAATCATCACTCAAGATGGTCAGA ACTTTATTGATGCTACAAGCGCAATGGAAGACCAGGTGAAAAATCAGCTCGACCAGCTCGATTATAACTCAGCGCTTGAA ACATTAAATGCGTATAAGGACAGTGAGTTTAAAGCGACAGATAAAGGTTATGAACTCACTAAGTCATTTAAAGGTCTAGA TGAATATAAACAACTCAGTGAAGCGACGGGTTCAGAGGATGCCGTTAAGGCACTTGAAGGTCAGTTAAAGGATATTGACG GGAAAGCAACTATCATATTTGATAAAGACTTTATGATGACTAAGACAATTACTGATATTAACATGACCGTAAAAGATAAG AAGATGAACACGAAGACAACAGCAACATATGATCAGTACAATCAAGTAAAAGCAATTGAAATTCCAGCAGGTGCGAAGAA TGCACAATCTATCGAAGAATTACAGAAATCCGAAGAAACTTCAACCGAAAAAGCATCATAA
Upstream 100 bases:
>100_bases ATTAAATCAAGCTGCACCAAGTACAGAGAACGAGTAATTATTATGAACCTCAATATCATTATGGTACTCTTAAGTTAATT AAATCAATCGGAGGAATTCT
Downstream 100 bases:
>100_bases AGATAATCCAGACGATTAATCGTCTGGATTATTTTTTATACGCATAAGTTGTAAAATACTTTCCTCGTAACTTCAGCTTC TTATAATCGTCTGCAATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MKSRQLLSLLLGSTLIFTACGQETKKTEDTKSEEKKAETSTESKSSETASEKKSSEVKDAEALVAKAQEKGQDIKSYHAN LDTQLKSGSDTSNVKMEMSVDDAERTKISTDMQNQSMDMYIFDKKVIITQDGQNFIDATSAMEDQVKNQLDQLDYNSALE TLNAYKDSEFKATDKGYELTKSFKGLDEYKQLSEATGSEDAVKALEGQLKDIDGKATIIFDKDFMMTKTITDINMTVKDK KMNTKTTATYDQYNQVKAIEIPAGAKNAQSIEELQKSEETSTEKAS
Sequences:
>Translated_286_residues MKSRQLLSLLLGSTLIFTACGQETKKTEDTKSEEKKAETSTESKSSETASEKKSSEVKDAEALVAKAQEKGQDIKSYHAN LDTQLKSGSDTSNVKMEMSVDDAERTKISTDMQNQSMDMYIFDKKVIITQDGQNFIDATSAMEDQVKNQLDQLDYNSALE TLNAYKDSEFKATDKGYELTKSFKGLDEYKQLSEATGSEDAVKALEGQLKDIDGKATIIFDKDFMMTKTITDINMTVKDK KMNTKTTATYDQYNQVKAIEIPAGAKNAQSIEELQKSEETSTEKAS >Mature_286_residues MKSRQLLSLLLGSTLIFTACGQETKKTEDTKSEEKKAETSTESKSSETASEKKSSEVKDAEALVAKAQEKGQDIKSYHAN LDTQLKSGSDTSNVKMEMSVDDAERTKISTDMQNQSMDMYIFDKKVIITQDGQNFIDATSAMEDQVKNQLDQLDYNSALE TLNAYKDSEFKATDKGYELTKSFKGLDEYKQLSEATGSEDAVKALEGQLKDIDGKATIIFDKDFMMTKTITDINMTVKDK KMNTKTTATYDQYNQVKAIEIPAGAKNAQSIEELQKSEETSTEKAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31801; Mature: 31801
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSRQLLSLLLGSTLIFTACGQETKKTEDTKSEEKKAETSTESKSSETASEKKSSEVKDA CCHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH EALVAKAQEKGQDIKSYHANLDTQLKSGSDTSNVKMEMSVDDAERTKISTDMQNQSMDMY HHHHHHHHHHCHHHHHHHCCCCHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCEE IFDKKVIITQDGQNFIDATSAMEDQVKNQLDQLDYNSALETLNAYKDSEFKATDKGYELT EECCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHH KSFKGLDEYKQLSEATGSEDAVKALEGQLKDIDGKATIIFDKDFMMTKTITDINMTVKDK HHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEEEECEEEEECC KMNTKTTATYDQYNQVKAIEIPAGAKNAQSIEELQKSEETSTEKAS CCCCCCCEEHHHHCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKSRQLLSLLLGSTLIFTACGQETKKTEDTKSEEKKAETSTESKSSETASEKKSSEVKDA CCHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH EALVAKAQEKGQDIKSYHANLDTQLKSGSDTSNVKMEMSVDDAERTKISTDMQNQSMDMY HHHHHHHHHHCHHHHHHHCCCCHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCEE IFDKKVIITQDGQNFIDATSAMEDQVKNQLDQLDYNSALETLNAYKDSEFKATDKGYELT EECCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHH KSFKGLDEYKQLSEATGSEDAVKALEGQLKDIDGKATIIFDKDFMMTKTITDINMTVKDK HHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEEEECEEEEECC KMNTKTTATYDQYNQVKAIEIPAGAKNAQSIEELQKSEETSTEKAS CCCCCCCEEHHHHCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA