Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

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The map label for this gene is ypuF [H]

Identifier: 222151392

GI number: 222151392

Start: 1252716

End: 1253234

Strand: Direct

Name: ypuF [H]

Synonym: MCCL_1145

Alternate gene names: 222151392

Gene position: 1252716-1253234 (Clockwise)

Preceding gene: 222151376

Following gene: 222151396

Centisome position: 59.59

GC content: 37.19

Gene sequence:

>519_bases
TTGAAAACTATTGTTGCTGAGTACGTCTATTATTTTGAATATCTGAGAGATTATTTCGAATGTCATGAACTACTAGAAGA
ATTCTGGAAAAATAAACCCGAATTTACCAAGCAAGACTTTGAAGTTGGTCTAATACTACTTGCAACTGGTCAGTATCATA
TGCGCCGTGGCAATATTACGGGGGGACATCGCTCACTGTCGAAAGCAAAGCGAATCCTCAAACTTTATATTGATTCCCAT
TATGAACAATTTATTGATATTGCGAGATTAACATCCGAGATTGATCTGCTTATAAACTCAGCAGTATATAAGCAGATCAC
TCTTCCAGCACGTTCAGAAGTTCGTTCATTATTGAGTGATAAAGATCATCACACTTCATCAGATATCCACGAAAATATCA
TTCACAAACATTTGAAACGTGATAGAACAGAAGTCCTTTTGGCCAGACACAGTGCATTATACAATAAAAAGCCAATAGAC
GAGTCCCCACACAACGGCCATCATGGTAATAAAGGTTAG

Upstream 100 bases:

>100_bases
TCATACTGCTTTATAAGATGTAGCAGTAGATCGAGTGGTCCGTGAAAGGACGCCAGTTTTACTTCATACATTATTTCACC
TATATTCTGGAGTGGTTAAA

Downstream 100 bases:

>100_bases
CAGCATCATATTATTACGAGGCTTTTCATCGTTGTGTTCAGATACTTTCAGTATCTGTCGTTGTTCCTGTGGTTTGAACA
CCTTTTTTTTACTTGCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: ORFX6 [H]

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKTIVAEYVYYFEYLRDYFECHELLEEFWKNKPEFTKQDFEVGLILLATGQYHMRRGNITGGHRSLSKAKRILKLYIDSH
YEQFIDIARLTSEIDLLINSAVYKQITLPARSEVRSLLSDKDHHTSSDIHENIIHKHLKRDRTEVLLARHSALYNKKPID
ESPHNGHHGNKG

Sequences:

>Translated_172_residues
MKTIVAEYVYYFEYLRDYFECHELLEEFWKNKPEFTKQDFEVGLILLATGQYHMRRGNITGGHRSLSKAKRILKLYIDSH
YEQFIDIARLTSEIDLLINSAVYKQITLPARSEVRSLLSDKDHHTSSDIHENIIHKHLKRDRTEVLLARHSALYNKKPID
ESPHNGHHGNKG
>Mature_172_residues
MKTIVAEYVYYFEYLRDYFECHELLEEFWKNKPEFTKQDFEVGLILLATGQYHMRRGNITGGHRSLSKAKRILKLYIDSH
YEQFIDIARLTSEIDLLINSAVYKQITLPARSEVRSLLSDKDHHTSSDIHENIIHKHLKRDRTEVLLARHSALYNKKPID
ESPHNGHHGNKG

Specific function: Unknown

COG id: COG1547

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005500
- InterPro:   IPR023203 [H]

Pfam domain/function: PF03745 DUF309 [H]

EC number: NA

Molecular weight: Translated: 20246; Mature: 20246

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIVAEYVYYFEYLRDYFECHELLEEFWKNKPEFTKQDFEVGLILLATGQYHMRRGNIT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCEEEEECCCHHHCCCCCC
GGHRSLSKAKRILKLYIDSHYEQFIDIARLTSEIDLLINSAVYKQITLPARSEVRSLLSD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
KDHHTSSDIHENIIHKHLKRDRTEVLLARHSALYNKKPIDESPHNGHHGNKG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTIVAEYVYYFEYLRDYFECHELLEEFWKNKPEFTKQDFEVGLILLATGQYHMRRGNIT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCEEEEECCCHHHCCCCCC
GGHRSLSKAKRILKLYIDSHYEQFIDIARLTSEIDLLINSAVYKQITLPARSEVRSLLSD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
KDHHTSSDIHENIIHKHLKRDRTEVLLARHSALYNKKPIDESPHNGHHGNKG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377 [H]