| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222151275
Identifier: 222151275
GI number: 222151275
Start: 1135321
End: 1135731
Strand: Direct
Name: 222151275
Synonym: MCCL_1028
Alternate gene names: NA
Gene position: 1135321-1135731 (Clockwise)
Preceding gene: 222151274
Following gene: 222151276
Centisome position: 54.0
GC content: 31.39
Gene sequence:
>411_bases ATGAGGATAAATTTTGGTTTTGATGTTTCTGTCAAAAATACAATAATCTCAGTAATTCAGTACGACAATCAATTTTATAT CGTTGATGGTCATACACGATGTTTCGTTGCTTTTCAAAAAGGGGTTATTGATATCCCGGTTGAAATTTATGATGTTGATA ATACATCAGTAGAGATGCAATTATATCTTGATTGTATAAAGTGGTGTGAACAAGAAAATATTTATCATATTAATGATCTA TCCGATTGCATTCTAGCAGAAGCAGAGTTTGAAAAACTATGGATTGAGAGATGTCAAAGTCATATGGAAGATATACAGAA TACGCTTGATGCTGATTTTGCTTATCGTGAGCATTTGAACCACAAAGTAACCTATACTCACGAAGAAGTCATGAAATATT TCAAATTGTAA
Upstream 100 bases:
>100_bases AAAAATTAAGGTAGAATAGTCTAATGAAGTAGAAGTTCTGATGATAGACGAGTATGTGTGATTTGAGTTATTTATTTTTT TGAGTTGGGGTCATTTTTAG
Downstream 100 bases:
>100_bases TCCTACACCAATCTGTTATAATAAAAATATAACAGATTGGTTTTATTTTTGTCTTTAAATCTGTTCTATACTTTATATAA CAGAGAGGTGGTTCAATGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MRINFGFDVSVKNTIISVIQYDNQFYIVDGHTRCFVAFQKGVIDIPVEIYDVDNTSVEMQLYLDCIKWCEQENIYHINDL SDCILAEAEFEKLWIERCQSHMEDIQNTLDADFAYREHLNHKVTYTHEEVMKYFKL
Sequences:
>Translated_136_residues MRINFGFDVSVKNTIISVIQYDNQFYIVDGHTRCFVAFQKGVIDIPVEIYDVDNTSVEMQLYLDCIKWCEQENIYHINDL SDCILAEAEFEKLWIERCQSHMEDIQNTLDADFAYREHLNHKVTYTHEEVMKYFKL >Mature_136_residues MRINFGFDVSVKNTIISVIQYDNQFYIVDGHTRCFVAFQKGVIDIPVEIYDVDNTSVEMQLYLDCIKWCEQENIYHINDL SDCILAEAEFEKLWIERCQSHMEDIQNTLDADFAYREHLNHKVTYTHEEVMKYFKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16245; Mature: 16245
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRINFGFDVSVKNTIISVIQYDNQFYIVDGHTRCFVAFQKGVIDIPVEIYDVDNTSVEMQ CEEECCCCEEHHHHHEEEEEECCEEEEEECCCEEEEEEECCEEECCEEEEECCCCCCHHH LYLDCIKWCEQENIYHINDLSDCILAEAEFEKLWIERCQSHMEDIQNTLDADFAYREHLN HHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC HKVTYTHEEVMKYFKL CCEEECHHHHHHHHCC >Mature Secondary Structure MRINFGFDVSVKNTIISVIQYDNQFYIVDGHTRCFVAFQKGVIDIPVEIYDVDNTSVEMQ CEEECCCCEEHHHHHEEEEEECCEEEEEECCCEEEEEEECCEEECCEEEEECCCCCCHHH LYLDCIKWCEQENIYHINDLSDCILAEAEFEKLWIERCQSHMEDIQNTLDADFAYREHLN HHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC HKVTYTHEEVMKYFKL CCEEECHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA