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The map label for this gene is yubA [H]

Identifier: 222151264

GI number: 222151264

Start: 1124486

End: 1125628

Strand: Direct

Name: yubA [H]

Synonym: MCCL_1017

Alternate gene names: 222151264

Gene position: 1124486-1125628 (Clockwise)

Preceding gene: 222151263

Following gene: 222151265

Centisome position: 53.49

GC content: 33.86

Gene sequence:

>1143_bases
ATGCATATGTCAGATCGTAATTTCTTTCAGTTTTTTGGTGGTAGAAAATTATTGTTCACATTAACTGTATTAATATTAAC
AGGAATATTGGTGCTGATAGTTAATCAAATTTCATTTATCTTTAAACCATTTATCGTTATCTTCAATACAGTAATAGGGC
CTGTTATCCTGGCTTTCATTTTATATTATCTTCTGAATCCTCTTGTCAATTTGATGGAACGTTATCGTATTAATCGGTTA
TGGGGTATCATTATATTGATTGCTACCATTATCAGTCTTTTTGCTTTACTCATCACCTGGTTAATTCCTGTTATAGAGGT
TCAGGTTACTGGGTTAGTTCATAATGCTCCAGATTATTTAAATCATCTATTAAAAGACTTTAATAGATTATCGAATGATT
CCAAGTTTGCTCCGTTTCTGCAGAACATTCAGGAATGGGTAAATACAAATCTTAGTGATCTTCCTAAGAAGGTAGGAGAG
TACCTTGGTAATTTCTCAACGCGTCTGCGATCGGTTGTCGATACAGTTGCAAGCGTAGCTATTGTCATCATGACTTTCCC
ATTTGTACTCTTCTTTTTGCTTAAAGATGGCGAACAGTTTAAAAATTATGTATTAAAATTAACACCGCCAAAATTTAGAA
AAGACCTTCATGATATTTTAGATAAGATGAATGTTCAGGTCGGTTCGTATATACAGGGCCAAATGTTTGTTGCTTTCTGT
ATCGGGGTGCTATTGTTTATTGGTTATATGATTATCGGGCTTGAATATGCTTTAATTCTTGCTTGTATCGCTGCAGTAAC
AAGTGTAGTTCCATATCTGGGACCAATGATTGCTATCAGTCCTGCTATTATTATTGCACTAGTTGATTCACCTTTTATGT
TGCTGAAACTTGCGATTGTATGGATGGCCGTACAGTTTTTAGAAGGTCACTTTATATCGCCTAACATTATGGGGAAGACA
ATGCAGATTCATCCTTTAACAATTATTTTTGTTCTGCTTTGTGCAGGGAATCTACTGGGTTTAATCGGCGTTATACTTGG
TATTCCTTTATATGCTATATTAAAGGTTTTGACTCAGTATATATTCGATAAATTTAAGAAACGTTATAATACGTATTTAT
CAGAAGATGGAGAAGTATATTGA

Upstream 100 bases:

>100_bases
TTATATATGGTTAAATTTCTTTATATATAATATAAATTATTATAAATATATTATGTAAACTATAAGTATATAGATAAAAT
AATATATTACATAAGGAAGG

Downstream 100 bases:

>100_bases
TTTTGAGATAAGTCATCATTCTAGACGAATGATGACTTATCTTTCATTTATTTCCAATAATATTTGGTTTTTTTCTTTTT
TTTCTGTAGAATATGTATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MHMSDRNFFQFFGGRKLLFTLTVLILTGILVLIVNQISFIFKPFIVIFNTVIGPVILAFILYYLLNPLVNLMERYRINRL
WGIIILIATIISLFALLITWLIPVIEVQVTGLVHNAPDYLNHLLKDFNRLSNDSKFAPFLQNIQEWVNTNLSDLPKKVGE
YLGNFSTRLRSVVDTVASVAIVIMTFPFVLFFLLKDGEQFKNYVLKLTPPKFRKDLHDILDKMNVQVGSYIQGQMFVAFC
IGVLLFIGYMIIGLEYALILACIAAVTSVVPYLGPMIAISPAIIIALVDSPFMLLKLAIVWMAVQFLEGHFISPNIMGKT
MQIHPLTIIFVLLCAGNLLGLIGVILGIPLYAILKVLTQYIFDKFKKRYNTYLSEDGEVY

Sequences:

>Translated_380_residues
MHMSDRNFFQFFGGRKLLFTLTVLILTGILVLIVNQISFIFKPFIVIFNTVIGPVILAFILYYLLNPLVNLMERYRINRL
WGIIILIATIISLFALLITWLIPVIEVQVTGLVHNAPDYLNHLLKDFNRLSNDSKFAPFLQNIQEWVNTNLSDLPKKVGE
YLGNFSTRLRSVVDTVASVAIVIMTFPFVLFFLLKDGEQFKNYVLKLTPPKFRKDLHDILDKMNVQVGSYIQGQMFVAFC
IGVLLFIGYMIIGLEYALILACIAAVTSVVPYLGPMIAISPAIIIALVDSPFMLLKLAIVWMAVQFLEGHFISPNIMGKT
MQIHPLTIIFVLLCAGNLLGLIGVILGIPLYAILKVLTQYIFDKFKKRYNTYLSEDGEVY
>Mature_380_residues
MHMSDRNFFQFFGGRKLLFTLTVLILTGILVLIVNQISFIFKPFIVIFNTVIGPVILAFILYYLLNPLVNLMERYRINRL
WGIIILIATIISLFALLITWLIPVIEVQVTGLVHNAPDYLNHLLKDFNRLSNDSKFAPFLQNIQEWVNTNLSDLPKKVGE
YLGNFSTRLRSVVDTVASVAIVIMTFPFVLFFLLKDGEQFKNYVLKLTPPKFRKDLHDILDKMNVQVGSYIQGQMFVAFC
IGVLLFIGYMIIGLEYALILACIAAVTSVVPYLGPMIAISPAIIIALVDSPFMLLKLAIVWMAVQFLEGHFISPNIMGKT
MQIHPLTIIFVLLCAGNLLGLIGVILGIPLYAILKVLTQYIFDKFKKRYNTYLSEDGEVY

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=331, Percent_Identity=26.8882175226586, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI87082271, Length=309, Percent_Identity=24.9190938511327, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 43100; Mature: 43100

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]