| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222151245
Identifier: 222151245
GI number: 222151245
Start: 1097280
End: 1097516
Strand: Direct
Name: 222151245
Synonym: MCCL_0996
Alternate gene names: NA
Gene position: 1097280-1097516 (Clockwise)
Preceding gene: 222151243
Following gene: 222151246
Centisome position: 52.19
GC content: 34.6
Gene sequence:
>237_bases ATGCTAGATGAAAATAAGATGAAGAGAATTAATGAATTAGCTCAGAAGAAAAAGGCAACAGGTCTTACGGACCAAGAAGG TAAAGAACAGACTTTACTACGTAAAGAATATTTACAGTCCTTCAGACAATCTTTCAAGAAAACGATAGAGAACACGACCG TCATCGACCCTGAAGGTAATGATGTGACACCTGACAAGGTGAAAGAAATTCAGAAATTAAATAATATCAGAAAATAA
Upstream 100 bases:
>100_bases AGGTGTTGTAAATTAATTTAAATAATTAATGTATTACGAGTGTAGCCAGTTGGTTTCACTCGTATTTTTTGGTATCTTTA TAATGAAAGGAATGAGAGTT
Downstream 100 bases:
>100_bases ATTTTGTAGATAGGAGCATTTATATGTTTAATGAAAAAGATCAATTGGCAGTAGATAGTATTAGAGCTTTAAGTATCGAT CAGATTGAGGAAGCGAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MLDENKMKRINELAQKKKATGLTDQEGKEQTLLRKEYLQSFRQSFKKTIENTTVIDPEGNDVTPDKVKEIQKLNNIRK
Sequences:
>Translated_78_residues MLDENKMKRINELAQKKKATGLTDQEGKEQTLLRKEYLQSFRQSFKKTIENTTVIDPEGNDVTPDKVKEIQKLNNIRK >Mature_78_residues MLDENKMKRINELAQKKKATGLTDQEGKEQTLLRKEYLQSFRQSFKKTIENTTVIDPEGNDVTPDKVKEIQKLNNIRK
Specific function: Unknown
COG id: COG4224
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0291 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y996_MACCJ (B9EBU2)
Other databases:
- EMBL: AP009484 - RefSeq: YP_002560399.1 - ProteinModelPortal: B9EBU2 - GeneID: 7391158 - GenomeReviews: AP009484_GR - KEGG: mcl:MCCL_0996 - OMA: TIENTTI - GO: GO:0005737 - HAMAP: MF_01103 - InterPro: IPR009242 - InterPro: IPR023218 - Gene3D: G3DSA:1.10.287.540
Pfam domain/function: PF05979 DUF896
EC number: NA
Molecular weight: Translated: 9136; Mature: 9136
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDENKMKRINELAQKKKATGLTDQEGKEQTLLRKEYLQSFRQSFKKTIENTTVIDPEGN CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCC DVTPDKVKEIQKLNNIRK CCCHHHHHHHHHHHHCCC >Mature Secondary Structure MLDENKMKRINELAQKKKATGLTDQEGKEQTLLRKEYLQSFRQSFKKTIENTTVIDPEGN CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCC DVTPDKVKEIQKLNNIRK CCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA