Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

Click here to switch to the map view.

The map label for this gene is 222151192

Identifier: 222151192

GI number: 222151192

Start: 1038864

End: 1039367

Strand: Direct

Name: 222151192

Synonym: MCCL_0943

Alternate gene names: NA

Gene position: 1038864-1039367 (Clockwise)

Preceding gene: 222151186

Following gene: 222151193

Centisome position: 49.42

GC content: 36.11

Gene sequence:

>504_bases
ATGAAAACAAGTATACAGAGACATAGACAAAGAACTCGTAGAACTCAATCACAAGTTGCAGACATGTTACTTACTACTAA
ACCAAATATCTGCAATATCGAGAAGGGACGTCGCAATATCTCATCTGAAATCTTAATGACAAGTTACGAAAGAAGTGATG
ATCCAATTCTAATCAAAGAAATGTCATACGAGTTCTCGAACGGATATACGACACCAGCACCATCAGAAGTAGTATTTGAT
GACCATCGTATATGTATAAAAGAGAGGATGCTTAATGAAATACGAGAAGTAATTGATGTTCTCAATCTCTATCGTATTGA
TAAACGCCCTGAATATTGCAGTCAAGAAGACATTGAGAATGTAAGACGTATCGCTAGCGAAACGCAAGATGTGATTTTTG
AAGCACAGGCGCTTATCGACAAAATCATTATAGATTACCAATTGAATCCACAAGAATTATCTAGAACAAGAAATCAGCGT
TACAAAATGGAACGCAGAATCTGA

Upstream 100 bases:

>100_bases
ACCAAATGTAATTGTACGGTGTGACCAACACCGTACCTAAAGTATAGACCAAAAGTACGTAAACATTAAAGGCCAAAAAA
TATTCAAGGAGAAAACAATT

Downstream 100 bases:

>100_bases
GGTGATTTTCATGGATAAAAAAGCAATTGGAAGAAAAATACAAAGTATTCGATTGAATCTAGGTATGAACACAAGAGAGT
TTGGAGAGGAAATACTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKTSIQRHRQRTRRTQSQVADMLLTTKPNICNIEKGRRNISSEILMTSYERSDDPILIKEMSYEFSNGYTTPAPSEVVFD
DHRICIKERMLNEIREVIDVLNLYRIDKRPEYCSQEDIENVRRIASETQDVIFEAQALIDKIIIDYQLNPQELSRTRNQR
YKMERRI

Sequences:

>Translated_167_residues
MKTSIQRHRQRTRRTQSQVADMLLTTKPNICNIEKGRRNISSEILMTSYERSDDPILIKEMSYEFSNGYTTPAPSEVVFD
DHRICIKERMLNEIREVIDVLNLYRIDKRPEYCSQEDIENVRRIASETQDVIFEAQALIDKIIIDYQLNPQELSRTRNQR
YKMERRI
>Mature_167_residues
MKTSIQRHRQRTRRTQSQVADMLLTTKPNICNIEKGRRNISSEILMTSYERSDDPILIKEMSYEFSNGYTTPAPSEVVFD
DHRICIKERMLNEIREVIDVLNLYRIDKRPEYCSQEDIENVRRIASETQDVIFEAQALIDKIIIDYQLNPQELSRTRNQR
YKMERRI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19959; Mature: 19959

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSIQRHRQRTRRTQSQVADMLLTTKPNICNIEKGRRNISSEILMTSYERSDDPILIKE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEHH
MSYEFSNGYTTPAPSEVVFDDHRICIKERMLNEIREVIDVLNLYRIDKRPEYCSQEDIEN
HHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
VRRIASETQDVIFEAQALIDKIIIDYQLNPQELSRTRNQRYKMERRI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTSIQRHRQRTRRTQSQVADMLLTTKPNICNIEKGRRNISSEILMTSYERSDDPILIKE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEHH
MSYEFSNGYTTPAPSEVVFDDHRICIKERMLNEIREVIDVLNLYRIDKRPEYCSQEDIEN
HHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
VRRIASETQDVIFEAQALIDKIIIDYQLNPQELSRTRNQRYKMERRI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA