Click here to switch to the map view.

The map label for this gene is glpD [H]

Identifier: 222151142

GI number: 222151142

Start: 986855

End: 988528

Strand: Direct

Name: glpD [H]

Synonym: MCCL_0893

Alternate gene names: 222151142

Gene position: 986855-988528 (Clockwise)

Preceding gene: 222151141

Following gene: 222151143

Centisome position: 46.94

GC content: 38.17

Gene sequence:

>1674_bases
ATGCAACTTTCAAGTCTGAATAGAAATCAAACATTGAACAAAATGAAGGAAGAATATTATGATATCGTAGTGGTTGGTGG
AGGTATCACTGGTGCAGGTATCGCATTTGATGCAGCGCAGCGCGGTATGAAAGTCGCGCTCGTTGAAATGCAGGACTTTG
CAAGCGGAACTTCTTCGCGTTCAACAAAGCTTGTTCATGGTGGATTACGTTACTTAAAACAGCTGCAAATTGGCGTTGTA
AGTGAGACTGGGAAAGAAAGAGCGATTGTTTATGAAAATGGACCTCATGTAACGACACCAGAATGGATGCTCTTACCGAT
GCATAAAGGGGGTACGTTTGGACCAGCAACAACGTCTCTTGCATTAAAAGTATATGATTATTTAGCAGGTGTAAAGAAAT
CGGAAAGAAGAACAATGCTTTCTGCAAAAGAAACATTAGCAAAAGAACCTCTCGTAAAAGAAAGTGGCCTTAAGGGTGGG
GGTTACTATGTTGAATATAAAACAGATGATGCGCGTATGACCATTGAAGTTATGAAACGTGCCGCAGAATTTGGTGCTGA
TATTTTAAACTATACAAAAGCAACCGGATTTACTTATGACAAGAAAAACAAGGTGAGTGGTATCGAGGCGGTTGATACAA
TCTCAAATACGAAGTTTAAAATTCAAGGGCGTAAAGTTGTCAATGCATCTGGGCCATGGGTTGATGAAGTGCGTGGAAAA
GACTATTCGAAAAATAATAAGCAACTCCGCCTGACAAAAGGAATCCATCTTGTCTTTGACGAAAGCGTTTTTCCACTCAA
ACAGGCAGTTTACTTTGATACTGAAAGCGATAAACGCATGATTTTTGCTATTCCTCGCGACGGTAAAACGTATGTCGGTA
CTACGGATACATTCTATAATAACGATAAAACAAGTCCTAAAGTAACACAGGAAGATCGTGATTATATCATTGATGCAATC
AACTATATGTTCCCGACTGTAAACGTTGCAGACGAGGATATTGAATCAACTTGGGCAGGTATTCGTCCTCTGATCTTAGA
AAAAGGAAAAGATCCATCTGAAATTTCACGTAAGGATGAAATTTGGGAAGGTAAATCTGGCCTTCTGACGATTGCCGGTG
GTAAATTAACAGGATATCGTCATATGGCTCAGGAAATCGTTGATTTAGTTGCAAAACGTTTAAAAGAAGAATATAAACTG
AACTTTAAAGAAAGCAACACTAAGCATACAACAATTTCTGGTGGAGATGTAGGAGGCAGTACTAATTTTGAGCACTTTAT
TGAAAAGTCATTGAAACCTGAACTCTACAGTTATCTACCGGAAGAGGAACAAAGATTCCTGATTAAAAAGTATGGTTCAA
ATGTAGAGAAGTTATTTAACATTGCACATACGAAACATACTGCTGAAGTCAACGGCCTGCCTCTAACATATTATGCACAA
CTTGTATATTCAATTCAGGAAGAAATGGTGATCAAACCTACTGATTTCTTGACACGTAGAACTGGTGATCTATATTTCGA
TATTAAAAAAGTTGAACAATATAAGGAAGCGGTTATTGATACGATGGCTAATTTACTTAACTATGATAATGGTCAACGTA
CAGAATATGCACGTGAGCTTGAACAAAAGATCCATGAAGCAAAATCACCGTCTGTTCAAGTTTCAGTAGAATAA

Upstream 100 bases:

>100_bases
AAATGGATGAAACAAAAAGAGAAGATCTATATAAAGGCTGGCAGACAGCGGTTAAAGCTACACAAGTATTTAAAAAATAA
GTTTTAATGGAGGAATAATA

Downstream 100 bases:

>100_bases
ATTACGATGAAAAGCAATTATGATCTAAACCATCCAAATAATATTTGGATGGTTTTCCTATATTTTCAGATAATGATAGG
GCTATGACGAAAACAAATTG

Product: aerobic glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MQLSSLNRNQTLNKMKEEYYDIVVVGGGITGAGIAFDAAQRGMKVALVEMQDFASGTSSRSTKLVHGGLRYLKQLQIGVV
SETGKERAIVYENGPHVTTPEWMLLPMHKGGTFGPATTSLALKVYDYLAGVKKSERRTMLSAKETLAKEPLVKESGLKGG
GYYVEYKTDDARMTIEVMKRAAEFGADILNYTKATGFTYDKKNKVSGIEAVDTISNTKFKIQGRKVVNASGPWVDEVRGK
DYSKNNKQLRLTKGIHLVFDESVFPLKQAVYFDTESDKRMIFAIPRDGKTYVGTTDTFYNNDKTSPKVTQEDRDYIIDAI
NYMFPTVNVADEDIESTWAGIRPLILEKGKDPSEISRKDEIWEGKSGLLTIAGGKLTGYRHMAQEIVDLVAKRLKEEYKL
NFKESNTKHTTISGGDVGGSTNFEHFIEKSLKPELYSYLPEEEQRFLIKKYGSNVEKLFNIAHTKHTAEVNGLPLTYYAQ
LVYSIQEEMVIKPTDFLTRRTGDLYFDIKKVEQYKEAVIDTMANLLNYDNGQRTEYARELEQKIHEAKSPSVQVSVE

Sequences:

>Translated_557_residues
MQLSSLNRNQTLNKMKEEYYDIVVVGGGITGAGIAFDAAQRGMKVALVEMQDFASGTSSRSTKLVHGGLRYLKQLQIGVV
SETGKERAIVYENGPHVTTPEWMLLPMHKGGTFGPATTSLALKVYDYLAGVKKSERRTMLSAKETLAKEPLVKESGLKGG
GYYVEYKTDDARMTIEVMKRAAEFGADILNYTKATGFTYDKKNKVSGIEAVDTISNTKFKIQGRKVVNASGPWVDEVRGK
DYSKNNKQLRLTKGIHLVFDESVFPLKQAVYFDTESDKRMIFAIPRDGKTYVGTTDTFYNNDKTSPKVTQEDRDYIIDAI
NYMFPTVNVADEDIESTWAGIRPLILEKGKDPSEISRKDEIWEGKSGLLTIAGGKLTGYRHMAQEIVDLVAKRLKEEYKL
NFKESNTKHTTISGGDVGGSTNFEHFIEKSLKPELYSYLPEEEQRFLIKKYGSNVEKLFNIAHTKHTAEVNGLPLTYYAQ
LVYSIQEEMVIKPTDFLTRRTGDLYFDIKKVEQYKEAVIDTMANLLNYDNGQRTEYARELEQKIHEAKSPSVQVSVE
>Mature_557_residues
MQLSSLNRNQTLNKMKEEYYDIVVVGGGITGAGIAFDAAQRGMKVALVEMQDFASGTSSRSTKLVHGGLRYLKQLQIGVV
SETGKERAIVYENGPHVTTPEWMLLPMHKGGTFGPATTSLALKVYDYLAGVKKSERRTMLSAKETLAKEPLVKESGLKGG
GYYVEYKTDDARMTIEVMKRAAEFGADILNYTKATGFTYDKKNKVSGIEAVDTISNTKFKIQGRKVVNASGPWVDEVRGK
DYSKNNKQLRLTKGIHLVFDESVFPLKQAVYFDTESDKRMIFAIPRDGKTYVGTTDTFYNNDKTSPKVTQEDRDYIIDAI
NYMFPTVNVADEDIESTWAGIRPLILEKGKDPSEISRKDEIWEGKSGLLTIAGGKLTGYRHMAQEIVDLVAKRLKEEYKL
NFKESNTKHTTISGGDVGGSTNFEHFIEKSLKPELYSYLPEEEQRFLIKKYGSNVEKLFNIAHTKHTAEVNGLPLTYYAQ
LVYSIQEEMVIKPTDFLTRRTGDLYFDIKKVEQYKEAVIDTMANLLNYDNGQRTEYARELEQKIHEAKSPSVQVSVE

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Molecular Oxygen Or Nitrate As Electron Acceptor. [C]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=544, Percent_Identity=31.4338235294118, Blast_Score=250, Evalue=3e-66,
Organism=Homo sapiens, GI285002231, Length=544, Percent_Identity=31.4338235294118, Blast_Score=250, Evalue=3e-66,
Organism=Escherichia coli, GI2367226, Length=471, Percent_Identity=31.2101910828025, Blast_Score=184, Evalue=2e-47,
Organism=Escherichia coli, GI1788574, Length=378, Percent_Identity=26.1904761904762, Blast_Score=89, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17509253, Length=391, Percent_Identity=36.3171355498721, Blast_Score=215, Evalue=6e-56,
Organism=Caenorhabditis elegans, GI115534726, Length=557, Percent_Identity=31.2387791741472, Blast_Score=213, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6322036, Length=613, Percent_Identity=29.0375203915171, Blast_Score=211, Evalue=3e-55,
Organism=Drosophila melanogaster, GI161077125, Length=541, Percent_Identity=30.4990757855823, Blast_Score=227, Evalue=2e-59,
Organism=Drosophila melanogaster, GI24653942, Length=541, Percent_Identity=30.4990757855823, Blast_Score=227, Evalue=2e-59,
Organism=Drosophila melanogaster, GI24653944, Length=541, Percent_Identity=30.4990757855823, Blast_Score=227, Evalue=2e-59,
Organism=Drosophila melanogaster, GI20130025, Length=541, Percent_Identity=30.4990757855823, Blast_Score=227, Evalue=2e-59,
Organism=Drosophila melanogaster, GI24586295, Length=551, Percent_Identity=29.2196007259528, Blast_Score=191, Evalue=8e-49,
Organism=Drosophila melanogaster, GI19921278, Length=561, Percent_Identity=25.4901960784314, Blast_Score=155, Evalue=5e-38,
Organism=Drosophila melanogaster, GI45550977, Length=411, Percent_Identity=22.6277372262774, Blast_Score=86, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 62772; Mature: 62772

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: PS00977 FAD_G3PDH_1 ; PS00978 FAD_G3PDH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLSSLNRNQTLNKMKEEYYDIVVVGGGITGAGIAFDAAQRGMKVALVEMQDFASGTSSR
CCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCCEEHHHHHCCCEEEEEEHHHHCCCCCCC
STKLVHGGLRYLKQLQIGVVSETGKERAIVYENGPHVTTPEWMLLPMHKGGTFGPATTSL
CHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCHHHHH
ALKVYDYLAGVKKSERRTMLSAKETLAKEPLVKESGLKGGGYYVEYKTDDARMTIEVMKR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEECCCCHHHHHHHHH
AAEFGADILNYTKATGFTYDKKNKVSGIEAVDTISNTKFKIQGRKVVNASGPWVDEVRGK
HHHHCHHHHHHHHHCCCEECCCCCCCCCHHHHHCCCCEEEEECCEEEECCCCCHHHHCCC
DYSKNNKQLRLTKGIHLVFDESVFPLKQAVYFDTESDKRMIFAIPRDGKTYVGTTDTFYN
CCCCCCCEEEEECCEEEEECCCCCCCHHEEEEECCCCCEEEEEECCCCCEEECCCCCCCC
NDKTSPKVTQEDRDYIIDAINYMFPTVNVADEDIESTWAGIRPLILEKGKDPSEISRKDE
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHCCCCCHHHHCCHHH
IWEGKSGLLTIAGGKLTGYRHMAQEIVDLVAKRLKEEYKLNFKESNTKHTTISGGDVGGS
HCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCC
TNFEHFIEKSLKPELYSYLPEEEQRFLIKKYGSNVEKLFNIAHTKHTAEVNGLPLTYYAQ
CCHHHHHHHCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHH
LVYSIQEEMVIKPTDFLTRRTGDLYFDIKKVEQYKEAVIDTMANLLNYDNGQRTEYAREL
HHHHHHHCEEECCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
EQKIHEAKSPSVQVSVE
HHHHHHCCCCCEEEEEC
>Mature Secondary Structure
MQLSSLNRNQTLNKMKEEYYDIVVVGGGITGAGIAFDAAQRGMKVALVEMQDFASGTSSR
CCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCCEEHHHHHCCCEEEEEEHHHHCCCCCCC
STKLVHGGLRYLKQLQIGVVSETGKERAIVYENGPHVTTPEWMLLPMHKGGTFGPATTSL
CHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCHHHHH
ALKVYDYLAGVKKSERRTMLSAKETLAKEPLVKESGLKGGGYYVEYKTDDARMTIEVMKR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEECCCCHHHHHHHHH
AAEFGADILNYTKATGFTYDKKNKVSGIEAVDTISNTKFKIQGRKVVNASGPWVDEVRGK
HHHHCHHHHHHHHHCCCEECCCCCCCCCHHHHHCCCCEEEEECCEEEECCCCCHHHHCCC
DYSKNNKQLRLTKGIHLVFDESVFPLKQAVYFDTESDKRMIFAIPRDGKTYVGTTDTFYN
CCCCCCCEEEEECCEEEEECCCCCCCHHEEEEECCCCCEEEEEECCCCCEEECCCCCCCC
NDKTSPKVTQEDRDYIIDAINYMFPTVNVADEDIESTWAGIRPLILEKGKDPSEISRKDE
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHCCCCCHHHHCCHHH
IWEGKSGLLTIAGGKLTGYRHMAQEIVDLVAKRLKEEYKLNFKESNTKHTTISGGDVGGS
HCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCC
TNFEHFIEKSLKPELYSYLPEEEQRFLIKKYGSNVEKLFNIAHTKHTAEVNGLPLTYYAQ
CCHHHHHHHCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHH
LVYSIQEEMVIKPTDFLTRRTGDLYFDIKKVEQYKEAVIDTMANLLNYDNGQRTEYAREL
HHHHHHHCEEECCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
EQKIHEAKSPSVQVSVE
HHHHHHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA