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The map label for this gene is ymcA [H]

Identifier: 222151136

GI number: 222151136

Start: 978862

End: 979287

Strand: Direct

Name: ymcA [H]

Synonym: MCCL_0887

Alternate gene names: 222151136

Gene position: 978862-979287 (Clockwise)

Preceding gene: 222151135

Following gene: 222151137

Centisome position: 46.56

GC content: 39.44

Gene sequence:

>426_bases
ATGTATACAAACGATGAAATTTTGGCAAAAGCAAAAGAATTAGGTAAGATGATGGCAGAAACAGAAGCAGTTGAGTTCTT
TAAACGTGCAGAGGCTCAGATTCATGAAACACAAGTTGTCAGAGAGAAAATGGCGTCTTTGAAATCATTACAAAAACAAG
CCGTCAACTTTGAACAATATGGCAAAGAAAAAGCACTACAGATGGTCGAAGAAAAAATTGCAAAGGTTGAAGCTGAACTG
GATGAAATGCCAATTGTAGATCAGTTCAAAGAAGCGCAATTTGAAGTGAATAGCATATTACAGATGGTTTCTCATGCAAT
CAGCCAGACCGTGACGGATGAGATTATCGTTTCAACTGGGGGCGACCTATTAACGGGTGAAACGGGTGCAGAAAAGAAGA
ATGCAGCACCAGGATGTGGAAATTAA

Upstream 100 bases:

>100_bases
AAGCAATTGGACAGCTTGTTAAAGTAAGAATCACAGAAACAAAACAATATTCAATGAACGGCGAATTAATAGAAATTATT
AAACCAGTTGAGGTGTAGAG

Downstream 100 bases:

>100_bases
TAACAATTAAAGGGGTTGAGACGATTCTTGTCTGAACCTCTTTTTTAAACGAATCCCTAAATGGAAATTATGAATAAAGG
ATTGAGAATATGTCTAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MYTNDEILAKAKELGKMMAETEAVEFFKRAEAQIHETQVVREKMASLKSLQKQAVNFEQYGKEKALQMVEEKIAKVEAEL
DEMPIVDQFKEAQFEVNSILQMVSHAISQTVTDEIIVSTGGDLLTGETGAEKKNAAPGCGN

Sequences:

>Translated_141_residues
MYTNDEILAKAKELGKMMAETEAVEFFKRAEAQIHETQVVREKMASLKSLQKQAVNFEQYGKEKALQMVEEKIAKVEAEL
DEMPIVDQFKEAQFEVNSILQMVSHAISQTVTDEIIVSTGGDLLTGETGAEKKNAAPGCGN
>Mature_141_residues
MYTNDEILAKAKELGKMMAETEAVEFFKRAEAQIHETQVVREKMASLKSLQKQAVNFEQYGKEKALQMVEEKIAKVEAEL
DEMPIVDQFKEAQFEVNSILQMVSHAISQTVTDEIIVSTGGDLLTGETGAEKKNAAPGCGN

Specific function: May work together with ylbF to regulate community development [H]

COG id: COG4550

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016783
- InterPro:   IPR010368 [H]

Pfam domain/function: PF06133 DUF964 [H]

EC number: NA

Molecular weight: Translated: 15626; Mature: 15626

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTNDEILAKAKELGKMMAETEAVEFFKRAEAQIHETQVVREKMASLKSLQKQAVNFEQY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
GKEKALQMVEEKIAKVEAELDEMPIVDQFKEAQFEVNSILQMVSHAISQTVTDEIIVSTG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GDLLTGETGAEKKNAAPGCGN
CCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYTNDEILAKAKELGKMMAETEAVEFFKRAEAQIHETQVVREKMASLKSLQKQAVNFEQY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
GKEKALQMVEEKIAKVEAELDEMPIVDQFKEAQFEVNSILQMVSHAISQTVTDEIIVSTG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GDLLTGETGAEKKNAAPGCGN
CCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]