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The map label for this gene is 222151115

Identifier: 222151115

GI number: 222151115

Start: 952620

End: 954293

Strand: Direct

Name: 222151115

Synonym: MCCL_0866

Alternate gene names: NA

Gene position: 952620-954293 (Clockwise)

Preceding gene: 222151114

Following gene: 222151116

Centisome position: 45.31

GC content: 38.23

Gene sequence:

>1674_bases
TTGAATCTAGTAAAAAAAGAAAATGAACATATAAAGATGACACCCCTTGGTGGTGTAGGTGAAATAGCAAAGAACATGTA
CATCGTTGAAGTAGACGATGAAATGTTTATGCTTGATGCAGGACTGATGTTTCCTGAAGATGAGATGCTTGGAATAGATG
TGGTTATACCAGATATTAACTATGTTATTGAGAACAAGGCAAGATTAAAAGGAATATTCCTTTCGCACGGGCATGTTGAT
GCAATTGGAGCTTTAAAGTACATTATGAATCAGATTGATGCACCTATCTATGGTTCTCGTCTGACGATAGCACTCGTTAA
AGACCGCATGAAAGAAGCGAATATAAATAAGAAGATAAAGTATTACACTGTCAATAATGACTCAATCATGCGTTTTAAAA
ATGTGAACGTGTCATTTTTCAGTACATCACACAGTATCCCAGATAGTCTTGGTATTGTGATTCATACATCACATGGCGCT
ATCGTTTATACTGGTGAATTTAAGTTTGATCAGAGTTTGTCGGGAAGCTATAGACCAGATATTACAAAGATGGGGCAGAT
TGGTGATAATGGTGTACTTATGCTAATCAGTGATTCCACAGAAGCTGAGAAACCGGGATACAATACACCTGAGAATGTCA
TAGAAAGTCACATCAATGACGAATTTGCTAAAGCAAATGGCCGTATTATTGTCTCTTGCTATGCATCGAACTTCATTAGA
ATACAGCAAGTACTAAACAGCGCAGCAAGAAATAACCGAAAAGTGTCATTTCTAGGTAAATCATTAGAAAGCTCTTTTAA
TACTGCACGTAAGCTGGGATACTTTGATATAAAAGAACAATTGCTGATACCGATTAAAGATGTGGAGAAGTATCCTAAGA
ATGAAGTCATCATTATTGCGACTGGTACTCAAGGTGAACCGATAGAGGCACTTGCACAGATGGCGCTCAATAAACATAAT
ATATTGAATATAGAAGAAGGAGATACAGTATTTATTACGACGACACCTTCATCTAACATGGAAGTCATATTAGGCTCTAC
AATTAATCATCTTGTTAAAGCAGGTGCGAAAGTCATACCTACTAATAAGAAGATTCATGCTTCTGGACATGGATGTATGG
AAGAGCTTAAGCTCATGCTCAACTTAATGAAGCCTACTTACTTTGTTCCGGTCCAAGGTGAATTTAAGATGCAGATTGCT
CATGCGAAGCTTGCTGCTGAGGCAGGTGTACTGCCTGAACATATCTTCTTATTAGAAAAGGGGGATTGTCTGAACTTTGA
CGGTGAGTACATGCTTGCGAACGAAAAGGTAACAGCGGGTAATGTCTTGATTGATGGTATTGGTGTTGGAGATGTCGGCA
ATATCGTATTAAGAGACCGACGCCTTCTAAGTGAGGACGGTATATTTATTGCTGTCGTAACAATCGACCCGAAAAATCGT
ACTATCGCTGCAGGGCCACAAATTCAGTCAAGAGGATTTGTTTATGTACGTGAGAGTGAGGATCTTCTAAAAGAAGCTGA
AGAAAAGGTCAGAGCTATTGTAGAGGATGGTTTGACTAAAAATAAAATTGAATGGGCTGAAATTAAGCAGGAAATGCGTG
ATAAGCTGAGTAAGCTGCTCTATGAACATACGAAACGCCGTCCGATGATTATTCCTGTAATTTCAGAAATTTAA

Upstream 100 bases:

>100_bases
TATTATAGAGGCTTACGCATTTTTTATTGTTAAATTGTCTTTATTTAGCTTATAATATAAGAAGTATGAATTGAACGGGT
AGAATTTAGGAGGAACTATT

Downstream 100 bases:

>100_bases
ATTATAAATAAACAAGCTATTAATAGCTTGTTTATTTATTTAGTAAGGTAGGTGTCAGTATGGCTATTAAGAAGAAAACA
CGTAAGAAAAAACGTAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: RNase J2 [H]

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MNLVKKENEHIKMTPLGGVGEIAKNMYIVEVDDEMFMLDAGLMFPEDEMLGIDVVIPDINYVIENKARLKGIFLSHGHVD
AIGALKYIMNQIDAPIYGSRLTIALVKDRMKEANINKKIKYYTVNNDSIMRFKNVNVSFFSTSHSIPDSLGIVIHTSHGA
IVYTGEFKFDQSLSGSYRPDITKMGQIGDNGVLMLISDSTEAEKPGYNTPENVIESHINDEFAKANGRIIVSCYASNFIR
IQQVLNSAARNNRKVSFLGKSLESSFNTARKLGYFDIKEQLLIPIKDVEKYPKNEVIIIATGTQGEPIEALAQMALNKHN
ILNIEEGDTVFITTTPSSNMEVILGSTINHLVKAGAKVIPTNKKIHASGHGCMEELKLMLNLMKPTYFVPVQGEFKMQIA
HAKLAAEAGVLPEHIFLLEKGDCLNFDGEYMLANEKVTAGNVLIDGIGVGDVGNIVLRDRRLLSEDGIFIAVVTIDPKNR
TIAAGPQIQSRGFVYVRESEDLLKEAEEKVRAIVEDGLTKNKIEWAEIKQEMRDKLSKLLYEHTKRRPMIIPVISEI

Sequences:

>Translated_557_residues
MNLVKKENEHIKMTPLGGVGEIAKNMYIVEVDDEMFMLDAGLMFPEDEMLGIDVVIPDINYVIENKARLKGIFLSHGHVD
AIGALKYIMNQIDAPIYGSRLTIALVKDRMKEANINKKIKYYTVNNDSIMRFKNVNVSFFSTSHSIPDSLGIVIHTSHGA
IVYTGEFKFDQSLSGSYRPDITKMGQIGDNGVLMLISDSTEAEKPGYNTPENVIESHINDEFAKANGRIIVSCYASNFIR
IQQVLNSAARNNRKVSFLGKSLESSFNTARKLGYFDIKEQLLIPIKDVEKYPKNEVIIIATGTQGEPIEALAQMALNKHN
ILNIEEGDTVFITTTPSSNMEVILGSTINHLVKAGAKVIPTNKKIHASGHGCMEELKLMLNLMKPTYFVPVQGEFKMQIA
HAKLAAEAGVLPEHIFLLEKGDCLNFDGEYMLANEKVTAGNVLIDGIGVGDVGNIVLRDRRLLSEDGIFIAVVTIDPKNR
TIAAGPQIQSRGFVYVRESEDLLKEAEEKVRAIVEDGLTKNKIEWAEIKQEMRDKLSKLLYEHTKRRPMIIPVISEI
>Mature_557_residues
MNLVKKENEHIKMTPLGGVGEIAKNMYIVEVDDEMFMLDAGLMFPEDEMLGIDVVIPDINYVIENKARLKGIFLSHGHVD
AIGALKYIMNQIDAPIYGSRLTIALVKDRMKEANINKKIKYYTVNNDSIMRFKNVNVSFFSTSHSIPDSLGIVIHTSHGA
IVYTGEFKFDQSLSGSYRPDITKMGQIGDNGVLMLISDSTEAEKPGYNTPENVIESHINDEFAKANGRIIVSCYASNFIR
IQQVLNSAARNNRKVSFLGKSLESSFNTARKLGYFDIKEQLLIPIKDVEKYPKNEVIIIATGTQGEPIEALAQMALNKHN
ILNIEEGDTVFITTTPSSNMEVILGSTINHLVKAGAKVIPTNKKIHASGHGCMEELKLMLNLMKPTYFVPVQGEFKMQIA
HAKLAAEAGVLPEHIFLLEKGDCLNFDGEYMLANEKVTAGNVLIDGIGVGDVGNIVLRDRRLLSEDGIFIAVVTIDPKNR
TIAAGPQIQSRGFVYVRESEDLLKEAEEKVRAIVEDGLTKNKIEWAEIKQEMRDKLSKLLYEHTKRRPMIIPVISEI

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR011108
- InterPro:   IPR004613 [H]

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL [H]

EC number: NA

Molecular weight: Translated: 62056; Mature: 62056

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLVKKENEHIKMTPLGGVGEIAKNMYIVEVDDEMFMLDAGLMFPEDEMLGIDVVIPDIN
CCCCCCCCCEEEEECCCCHHHHHCCEEEEEECCCEEEEECCCCCCCCCEEEEEEEECCCC
YVIENKARLKGIFLSHGHVDAIGALKYIMNQIDAPIYGSRLTIALVKDRMKEANINKKIK
EEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHCCCCCEEE
YYTVNNDSIMRFKNVNVSFFSTSHSIPDSLGIVIHTSHGAIVYTGEFKFDQSLSGSYRPD
EEEECCCCEEEEEECEEEEEECCCCCCCCCEEEEECCCCEEEEEECEEECCCCCCCCCCC
ITKMGQIGDNGVLMLISDSTEAEKPGYNTPENVIESHINDEFAKANGRIIVSCYASNFIR
CHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCHHHHHCCCCEEEEEECCCHHH
IQQVLNSAARNNRKVSFLGKSLESSFNTARKLGYFDIKEQLLIPIKDVEKYPKNEVIIIA
HHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCEECCCCEEEEHHHHHHCCCCCEEEEE
TGTQGEPIEALAQMALNKHNILNIEEGDTVFITTTPSSNMEVILGSTINHLVKAGAKVIP
ECCCCCHHHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCEEEECCHHHHHHHCCCEEEC
TNKKIHASGHGCMEELKLMLNLMKPTYFVPVQGEFKMQIAHAKLAAEAGVLPEHIFLLEK
CCCEEECCCCHHHHHHHHHHHHCCCEEEEECCCCEEEEEEHHHHHHHCCCCCCEEEEEEC
GDCLNFDGEYMLANEKVTAGNVLIDGIGVGDVGNIVLRDRRLLSEDGIFIAVVTIDPKNR
CCEECCCCCEEEECCEEEECCEEEEECCCCCCCCEEEECCHHHCCCCEEEEEEEECCCCC
TIAAGPQIQSRGFVYVRESEDLLKEAEEKVRAIVEDGLTKNKIEWAEIKQEMRDKLSKLL
EEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
YEHTKRRPMIIPVISEI
HHHHCCCCEEEEECCCC
>Mature Secondary Structure
MNLVKKENEHIKMTPLGGVGEIAKNMYIVEVDDEMFMLDAGLMFPEDEMLGIDVVIPDIN
CCCCCCCCCEEEEECCCCHHHHHCCEEEEEECCCEEEEECCCCCCCCCEEEEEEEECCCC
YVIENKARLKGIFLSHGHVDAIGALKYIMNQIDAPIYGSRLTIALVKDRMKEANINKKIK
EEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHCCCCCEEE
YYTVNNDSIMRFKNVNVSFFSTSHSIPDSLGIVIHTSHGAIVYTGEFKFDQSLSGSYRPD
EEEECCCCEEEEEECEEEEEECCCCCCCCCEEEEECCCCEEEEEECEEECCCCCCCCCCC
ITKMGQIGDNGVLMLISDSTEAEKPGYNTPENVIESHINDEFAKANGRIIVSCYASNFIR
CHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCHHHHHCCCCEEEEEECCCHHH
IQQVLNSAARNNRKVSFLGKSLESSFNTARKLGYFDIKEQLLIPIKDVEKYPKNEVIIIA
HHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCEECCCCEEEEHHHHHHCCCCCEEEEE
TGTQGEPIEALAQMALNKHNILNIEEGDTVFITTTPSSNMEVILGSTINHLVKAGAKVIP
ECCCCCHHHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCEEEECCHHHHHHHCCCEEEC
TNKKIHASGHGCMEELKLMLNLMKPTYFVPVQGEFKMQIAHAKLAAEAGVLPEHIFLLEK
CCCEEECCCCHHHHHHHHHHHHCCCEEEEECCCCEEEEEEHHHHHHHCCCCCCEEEEEEC
GDCLNFDGEYMLANEKVTAGNVLIDGIGVGDVGNIVLRDRRLLSEDGIFIAVVTIDPKNR
CCEECCCCCEEEECCEEEECCEEEEECCCCCCCCEEEECCHHHCCCCEEEEEEEECCCCC
TIAAGPQIQSRGFVYVRESEDLLKEAEEKVRAIVEDGLTKNKIEWAEIKQEMRDKLSKLL
EEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
YEHTKRRPMIIPVISEI
HHHHCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA