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The map label for this gene is fapR [H]

Identifier: 222151062

GI number: 222151062

Start: 884630

End: 885193

Strand: Direct

Name: fapR [H]

Synonym: MCCL_0813

Alternate gene names: 222151062

Gene position: 884630-885193 (Clockwise)

Preceding gene: 222151061

Following gene: 222151063

Centisome position: 42.08

GC content: 35.46

Gene sequence:

>564_bases
ATGAAAAAGTTGTCAAAGCACTTAAGACAGGAACAGTTACAACAATTATTGGAAAATGATCCATTCATAACGGATGAAAC
ATTAAGTCATGAATTTAATGTAAGCATACAGACCATTCGGCTTGACCGTCTGGAACTTAACATACCTGAATTAAGAGAGC
GTATTAAGAATGTTGCGGTTAAATCACATGACGAAATCAGAACATTATCTATGGATGACATCATAGGAGAAGTTATCGAT
ATTGAACTTGATCATATGGCATTATCTATTTTGGATATTAAGAAGGAGCATGTTTTCAGTCGAAATAACATTGCGAGAGG
ACATTATTTATTTGCACAGGCAAATTCATTATGTGTTGCTCTAATCAATGATGAATTTGCACTGACTGTTTCAAGCAGCA
TACATTTCCAGAAGCCTGTGATGCTTGGTGACCGAGTTGTAACAAAGGCAGTGCTTATTGAGAAGAAGGACAAAAGAGCA
AAGATCGAAGTTTTCAGTACAGTCAATCAAAGTCAAGTATTCTATGGCGAGTTTGAGATGTATCACAATAATAAAGGAGC
TTAA

Upstream 100 bases:

>100_bases
AAGGCATATAAATGTCTTTTCCTTTTTTTGTTGCAGTGTGTTTATATTTTTGTTATATTTACTAGTATTAAGACCAACTA
CTAATAAGGGAAATGAATGT

Downstream 100 bases:

>100_bases
ATATGATTAAGATAGCAGTAGATATGCACGGCGGAGACAATGCACCGGACATCGTTTTAGATGGAATTGAAATGTTCCTT
AAGGAATTTAATGATGTAGA

Product: fatty acid biosynthesis transcriptional regulator

Products: NA

Alternate protein names: Fatty acid and phospholipid biosynthesis regulator [H]

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKKLSKHLRQEQLQQLLENDPFITDETLSHEFNVSIQTIRLDRLELNIPELRERIKNVAVKSHDEIRTLSMDDIIGEVID
IELDHMALSILDIKKEHVFSRNNIARGHYLFAQANSLCVALINDEFALTVSSSIHFQKPVMLGDRVVTKAVLIEKKDKRA
KIEVFSTVNQSQVFYGEFEMYHNNKGA

Sequences:

>Translated_187_residues
MKKLSKHLRQEQLQQLLENDPFITDETLSHEFNVSIQTIRLDRLELNIPELRERIKNVAVKSHDEIRTLSMDDIIGEVID
IELDHMALSILDIKKEHVFSRNNIARGHYLFAQANSLCVALINDEFALTVSSSIHFQKPVMLGDRVVTKAVLIEKKDKRA
KIEVFSTVNQSQVFYGEFEMYHNNKGA
>Mature_187_residues
MKKLSKHLRQEQLQQLLENDPFITDETLSHEFNVSIQTIRLDRLELNIPELRERIKNVAVKSHDEIRTLSMDDIIGEVID
IELDHMALSILDIKKEHVFSRNNIARGHYLFAQANSLCVALINDEFALTVSSSIHFQKPVMLGDRVVTKAVLIEKKDKRA
KIEVFSTVNQSQVFYGEFEMYHNNKGA

Specific function: Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism [H]

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fapR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR017275
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 21602; Mature: 21602

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLSKHLRQEQLQQLLENDPFITDETLSHEFNVSIQTIRLDRLELNIPELRERIKNVAV
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECEEEEEEEEEEEECCCHHHHHHHHHHHC
KSHDEIRTLSMDDIIGEVIDIELDHMALSILDIKKEHVFSRNNIARGHYLFAQANSLCVA
CCCCCEEEECHHHHHHHHHEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEE
LINDEFALTVSSSIHFQKPVMLGDRVVTKAVLIEKKDKRAKIEVFSTVNQSQVFYGEFEM
EECCCEEEEEECCCEECCCEEECHHHHHHHHEEECCCCCCEEEEEECCCCCEEEEEEEEE
YHNNKGA
EECCCCC
>Mature Secondary Structure
MKKLSKHLRQEQLQQLLENDPFITDETLSHEFNVSIQTIRLDRLELNIPELRERIKNVAV
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECEEEEEEEEEEEECCCHHHHHHHHHHHC
KSHDEIRTLSMDDIIGEVIDIELDHMALSILDIKKEHVFSRNNIARGHYLFAQANSLCVA
CCCCCEEEECHHHHHHHHHEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEE
LINDEFALTVSSSIHFQKPVMLGDRVVTKAVLIEKKDKRAKIEVFSTVNQSQVFYGEFEM
EECCCEEEEEECCCEECCCEEECHHHHHHHHEEECCCCCCEEEEEECCCCCEEEEEEEEE
YHNNKGA
EECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA