| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is glgA [H]
Identifier: 222151034
GI number: 222151034
Start: 847681
End: 849084
Strand: Direct
Name: glgA [H]
Synonym: MCCL_0785
Alternate gene names: 222151034
Gene position: 847681-849084 (Clockwise)
Preceding gene: 222151033
Following gene: 222151035
Centisome position: 40.32
GC content: 37.18
Gene sequence:
>1404_bases GTGATGAAAAAGATATTATTTGTAGCTTCAGAATGCACACCTTTCTTTAAGTCTGGAGGACTTGCTGATGTAATTGGCAG TCTTCCTCAATATTTAAATCAAACAGGTGACTGTGAAGTGCGTGTGATTTTACCACTTTATCAAGACTTAAAATCTGAAT ACAAGGAACAGCTTAAAGAAGAAATGATTTTTCAGACACATGTAGGCTGGCGTTTTCAGTATACCCGCATTCTATCATTA AAATGGAATGGCATTATTTATTATTTTGTTGATAATATGCAGTATTTCAGTCGTGATACACTGTATGGTTATGATGATGA TGGAGAACGTTTTGTCTTCTTTTCAAATGCTGTAATAGAATTTATCTATAGAGGGGATTATAAACCTGACGTACTTCATG GACATGACTGGCAAGCGGGGGCAGCAGTTGCGCTATGTAATATTAAGCAGCCTGTTGCAGGAATTCGCACAGTGTTTACC ATCCATAATATCAAATATCAAGGAATGCTGATGTACGATGCGTTCGACAATCTTTTTAACCTTGATCGCGTTCATTTTGC TGGTTTTGAGTGGAGAGGCATGCTGAATCTTATGAAAGCAGGTATCTTCCATGCTGATAAGATTACAACGGTATCTCCAA GCTATGCTGAAGAGATTAGGTCACCATACTACGGCGAAGGGCTTGAAGACTTATTGAATATGCGTGGACGTGATTTGTCA GGTATTGTCAATGGGATAAATGTTAAAGATTATAATGCACTTACTGATAAGAGCATCGCCGTCAATTTCAAAAGTTCGAT TCTAAAGAAACGAGAGAATAAGACAATACTTCAGGAGACTTTCAATCTACCTGTTTCTGCTCAAATACCAATGTATGCAA TAATCACGAGGATGGTAGAGCAAAAGGGTCTACATCTTGTGATGCGTATTATGGAAGAATTTATACAGAATGAGGTACAG CTCTTTATCATGGGAAATGGCGAAGTAGAGTTTGAAAACTACTTTAATTATCTTCAGGAGAAGTATCCTGATAAAGTACG CTTCTATAGAGGGTTTGATGAACAAGTTTCAAGGCAGATCTATGCAGCAAGCGATTTCTTTATCATGCCATCACTTTTTG AACCTTGTGGTCTGAGTCAACTGATTGCGCTGCAATATCGCTCCATTCCAATAGTTCGTGAAACAGGAGGGTTAAAGGAT ACCGTCATTCCTTTCAATGAAGTTTCGATGGAAGGTACTGGATTATCCTTTGCTAACTATAATGCACATGAATTATTAGA TAGACTTTATGCATCATTAATAATCTATCATGATGAAAACAAATATAAAGCACTGATTAAGAACATCACAAAAGTGAACC ATAGCTGGGATGCTTCAGCGCGAAAATACTTAGATATCTATTAA
Upstream 100 bases:
>100_bases ATAAAGACGTTATTGTAAATGAGCATCAGAAATTGATCGGGTCGCAAGATAAACCGTTTGTTGTTGCGAAAAGACAAACA ATTTAAAGAAAGTTGGAAAA
Downstream 100 bases:
>100_bases GGAGACTTTAATGAGAACATATACAAAATCAGAATTTCGTAAAGTATTAGAAACTAAGTTGATGAATAAACGTACTGCAA CTTTGGAAGAGTCTACAGAT
Product: glycogen synthase
Products: NA
Alternate protein names: Starch [bacterial glycogen] synthase [H]
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MMKKILFVASECTPFFKSGGLADVIGSLPQYLNQTGDCEVRVILPLYQDLKSEYKEQLKEEMIFQTHVGWRFQYTRILSL KWNGIIYYFVDNMQYFSRDTLYGYDDDGERFVFFSNAVIEFIYRGDYKPDVLHGHDWQAGAAVALCNIKQPVAGIRTVFT IHNIKYQGMLMYDAFDNLFNLDRVHFAGFEWRGMLNLMKAGIFHADKITTVSPSYAEEIRSPYYGEGLEDLLNMRGRDLS GIVNGINVKDYNALTDKSIAVNFKSSILKKRENKTILQETFNLPVSAQIPMYAIITRMVEQKGLHLVMRIMEEFIQNEVQ LFIMGNGEVEFENYFNYLQEKYPDKVRFYRGFDEQVSRQIYAASDFFIMPSLFEPCGLSQLIALQYRSIPIVRETGGLKD TVIPFNEVSMEGTGLSFANYNAHELLDRLYASLIIYHDENKYKALIKNITKVNHSWDASARKYLDIY
Sequences:
>Translated_467_residues MMKKILFVASECTPFFKSGGLADVIGSLPQYLNQTGDCEVRVILPLYQDLKSEYKEQLKEEMIFQTHVGWRFQYTRILSL KWNGIIYYFVDNMQYFSRDTLYGYDDDGERFVFFSNAVIEFIYRGDYKPDVLHGHDWQAGAAVALCNIKQPVAGIRTVFT IHNIKYQGMLMYDAFDNLFNLDRVHFAGFEWRGMLNLMKAGIFHADKITTVSPSYAEEIRSPYYGEGLEDLLNMRGRDLS GIVNGINVKDYNALTDKSIAVNFKSSILKKRENKTILQETFNLPVSAQIPMYAIITRMVEQKGLHLVMRIMEEFIQNEVQ LFIMGNGEVEFENYFNYLQEKYPDKVRFYRGFDEQVSRQIYAASDFFIMPSLFEPCGLSQLIALQYRSIPIVRETGGLKD TVIPFNEVSMEGTGLSFANYNAHELLDRLYASLIIYHDENKYKALIKNITKVNHSWDASARKYLDIY >Mature_467_residues MMKKILFVASECTPFFKSGGLADVIGSLPQYLNQTGDCEVRVILPLYQDLKSEYKEQLKEEMIFQTHVGWRFQYTRILSL KWNGIIYYFVDNMQYFSRDTLYGYDDDGERFVFFSNAVIEFIYRGDYKPDVLHGHDWQAGAAVALCNIKQPVAGIRTVFT IHNIKYQGMLMYDAFDNLFNLDRVHFAGFEWRGMLNLMKAGIFHADKITTVSPSYAEEIRSPYYGEGLEDLLNMRGRDLS GIVNGINVKDYNALTDKSIAVNFKSSILKKRENKTILQETFNLPVSAQIPMYAIITRMVEQKGLHLVMRIMEEFIQNEVQ LFIMGNGEVEFENYFNYLQEKYPDKVRFYRGFDEQVSRQIYAASDFFIMPSLFEPCGLSQLIALQYRSIPIVRETGGLKD TVIPFNEVSMEGTGLSFANYNAHELLDRLYASLIIYHDENKYKALIKNITKVNHSWDASARKYLDIY
Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose [H]
COG id: COG0297
COG function: function code G; Glycogen synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789836, Length=487, Percent_Identity=32.8542094455852, Blast_Score=270, Evalue=2e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011835 - InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.21 [H]
Molecular weight: Translated: 54194; Mature: 54194
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKILFVASECTPFFKSGGLADVIGSLPQYLNQTGDCEVRVILPLYQDLKSEYKEQLKE CCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHH EMIFQTHVGWRFQYTRILSLKWNGIIYYFVDNMQYFSRDTLYGYDDDGERFVFFSNAVIE HHHHHHCCCCEEEEEEEEEEEECCEEEEEECCCHHHCCCCCCCCCCCCCEEEEEHHHHHH FIYRGDYKPDVLHGHDWQAGAAVALCNIKQPVAGIRTVFTIHNIKYQGMLMYDAFDNLFN HHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHEEEEECEEECCEEEEHHHHHHHC LDRVHFAGFEWRGMLNLMKAGIFHADKITTVSPSYAEEIRSPYYGEGLEDLLNMRGRDLS CCCEEECCCCHHHHHHHHHHCCEECCCEEECCCHHHHHHCCCCCCCCHHHHHHCCCCCHH GIVNGINVKDYNALTDKSIAVNFKSSILKKRENKTILQETFNLPVSAQIPMYAIITRMVE HHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHH QKGLHLVMRIMEEFIQNEVQLFIMGNGEVEFENYFNYLQEKYPDKVRFYRGFDEQVSRQI HCCHHHHHHHHHHHHCCCEEEEEEECCCEEHHHHHHHHHHHCCCHHHHHCCCHHHHHHHH YAASDFFIMPSLFEPCGLSQLIALQYRSIPIVRETGGLKDTVIPFNEVSMEGTGLSFANY EECCCCEECCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCHHHCCCCCCCCEECCC NAHELLDRLYASLIIYHDENKYKALIKNITKVNHSWDASARKYLDIY CHHHHHHHHHHHEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHCCCC >Mature Secondary Structure MMKKILFVASECTPFFKSGGLADVIGSLPQYLNQTGDCEVRVILPLYQDLKSEYKEQLKE CCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHH EMIFQTHVGWRFQYTRILSLKWNGIIYYFVDNMQYFSRDTLYGYDDDGERFVFFSNAVIE HHHHHHCCCCEEEEEEEEEEEECCEEEEEECCCHHHCCCCCCCCCCCCCEEEEEHHHHHH FIYRGDYKPDVLHGHDWQAGAAVALCNIKQPVAGIRTVFTIHNIKYQGMLMYDAFDNLFN HHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHEEEEECEEECCEEEEHHHHHHHC LDRVHFAGFEWRGMLNLMKAGIFHADKITTVSPSYAEEIRSPYYGEGLEDLLNMRGRDLS CCCEEECCCCHHHHHHHHHHCCEECCCEEECCCHHHHHHCCCCCCCCHHHHHHCCCCCHH GIVNGINVKDYNALTDKSIAVNFKSSILKKRENKTILQETFNLPVSAQIPMYAIITRMVE HHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHH QKGLHLVMRIMEEFIQNEVQLFIMGNGEVEFENYFNYLQEKYPDKVRFYRGFDEQVSRQI HCCHHHHHHHHHHHHCCCEEEEEEECCCEEHHHHHHHHHHHCCCHHHHHCCCHHHHHHHH YAASDFFIMPSLFEPCGLSQLIALQYRSIPIVRETGGLKDTVIPFNEVSMEGTGLSFANY EECCCCEECCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCHHHCCCCCCCCEECCC NAHELLDRLYASLIIYHDENKYKALIKNITKVNHSWDASARKYLDIY CHHHHHHHHHHHEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12235376 [H]