| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222151027
Identifier: 222151027
GI number: 222151027
Start: 838727
End: 839446
Strand: Direct
Name: 222151027
Synonym: MCCL_0778
Alternate gene names: NA
Gene position: 838727-839446 (Clockwise)
Preceding gene: 222151026
Following gene: 222151031
Centisome position: 39.9
GC content: 34.17
Gene sequence:
>720_bases ATGGGCAAATGGGACCACATTAATAAGTTTATTAAAGAAGATGACGATAAAAAGAATGTTGTCAATGATTCATTGGACCA GCAGCATGTGAAGACCAGCAAAAGAAAAAAGTTAATCGCACAAGTAAAGCAACCGATTAAAGAATTTGATTACCACATCG ATTCTTTCTTGAACTATGCTTATCGCTCATTTGTCATGCCGAATAAAATAATAGATAACAGCAAAAGTAGTAAATATTTT TATTTTGCGGTTAGTAACTACTGCATCTTCTTGTGTATGCTCTATCTACTTGGTGCATTTCATCTACGTACGTTTAATAA CCTGGAAGGCATTAATTATGTAATCAGCGGGGGGACGTTTGCTTTAATCGCTATTTTAATGACGTATTTAATTCAGATGC TTGCTTTAAATCGGAGTAACAACTTCTATAAAGTATTTGTAGATACGATCAGCTACTATACGCTGTACAATTTCTTTATG CTTATCGAGCTGCTTTGTGTATATCTGCGCCCAGAATTCGTCATGATCATCTATACGATAAGATTTTTAATTATTATGAC AGTGCCGATCAAACTGTTCTTTACATATAAGGAGATGAACAAGATAGAGATTGATGTCTTCCCGTTGCATATTCTATATA TCATCATTATGGTGAGCTATATTTACATTACTAGAGACATGCCTTGGCTGAACTTCTTTAAGTTTGTTCCTTCTGTGTAA
Upstream 100 bases:
>100_bases ATATTGAAGGATTAATTAACTGGCGTGATAACTTATAGGCAAAAAGAAACTGTTTAATGTATACTATCATTAAACAGTTT TATTTTTTTGAGGTGAGAAA
Downstream 100 bases:
>100_bases AGTAATAAATAAGCACTTGGAACCTTCAAGGTTTCAAGTGCTTATTTAGTAGTTAATTGAAAAAAGCCTGGTTCATTTCT TCTGCAAGTGATGCGATATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MGKWDHINKFIKEDDDKKNVVNDSLDQQHVKTSKRKKLIAQVKQPIKEFDYHIDSFLNYAYRSFVMPNKIIDNSKSSKYF YFAVSNYCIFLCMLYLLGAFHLRTFNNLEGINYVISGGTFALIAILMTYLIQMLALNRSNNFYKVFVDTISYYTLYNFFM LIELLCVYLRPEFVMIIYTIRFLIIMTVPIKLFFTYKEMNKIEIDVFPLHILYIIIMVSYIYITRDMPWLNFFKFVPSV
Sequences:
>Translated_239_residues MGKWDHINKFIKEDDDKKNVVNDSLDQQHVKTSKRKKLIAQVKQPIKEFDYHIDSFLNYAYRSFVMPNKIIDNSKSSKYF YFAVSNYCIFLCMLYLLGAFHLRTFNNLEGINYVISGGTFALIAILMTYLIQMLALNRSNNFYKVFVDTISYYTLYNFFM LIELLCVYLRPEFVMIIYTIRFLIIMTVPIKLFFTYKEMNKIEIDVFPLHILYIIIMVSYIYITRDMPWLNFFKFVPSV >Mature_238_residues GKWDHINKFIKEDDDKKNVVNDSLDQQHVKTSKRKKLIAQVKQPIKEFDYHIDSFLNYAYRSFVMPNKIIDNSKSSKYFY FAVSNYCIFLCMLYLLGAFHLRTFNNLEGINYVISGGTFALIAILMTYLIQMLALNRSNNFYKVFVDTISYYTLYNFFML IELLCVYLRPEFVMIIYTIRFLIIMTVPIKLFFTYKEMNKIEIDVFPLHILYIIIMVSYIYITRDMPWLNFFKFVPSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28636; Mature: 28505
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKWDHINKFIKEDDDKKNVVNDSLDQQHVKTSKRKKLIAQVKQPIKEFDYHIDSFLNYA CCCHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRSFVMPNKIIDNSKSSKYFYFAVSNYCIFLCMLYLLGAFHLRTFNNLEGINYVISGGTF HHHHCCCHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHH ALIAILMTYLIQMLALNRSNNFYKVFVDTISYYTLYNFFMLIELLCVYLRPEFVMIIYTI HHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH RFLIIMTVPIKLFFTYKEMNKIEIDVFPLHILYIIIMVSYIYITRDMPWLNFFKFVPSV HHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC >Mature Secondary Structure GKWDHINKFIKEDDDKKNVVNDSLDQQHVKTSKRKKLIAQVKQPIKEFDYHIDSFLNYA CCHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRSFVMPNKIIDNSKSSKYFYFAVSNYCIFLCMLYLLGAFHLRTFNNLEGINYVISGGTF HHHHCCCHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHH ALIAILMTYLIQMLALNRSNNFYKVFVDTISYYTLYNFFMLIELLCVYLRPEFVMIIYTI HHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH RFLIIMTVPIKLFFTYKEMNKIEIDVFPLHILYIIIMVSYIYITRDMPWLNFFKFVPSV HHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA