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The map label for this gene is cyoB [H]

Identifier: 222150953

GI number: 222150953

Start: 758025

End: 759377

Strand: Direct

Name: cyoB [H]

Synonym: MCCL_0703

Alternate gene names: 222150953

Gene position: 758025-759377 (Clockwise)

Preceding gene: 222150951

Following gene: 222150954

Centisome position: 36.06

GC content: 40.13

Gene sequence:

>1353_bases
ATGGATGGACTCGTTATGAGTAGAATTTTAACTGCGATGACTTTAGGTTTTCATATCATCTTTGCAACGATTGGCGTAGG
TATGCCACTTATGATCATGATTGCTGAAGGATTAGGTATCAAAACCGGCAATATGAAATATATTGCACTTGCACGTCGTA
TGGCAAAAGCATTTACAATTACTGTCGCAGTCGGTGTTGTAACCGGTACAATTATCGGATTACAATTATCGTTACTTTGG
CCGTCATTTATGAAGCTTGGAGGCCAGGTGATTGCATTACCATTATTTATGGAAACATTCGCGTTTTTCTTTGAAGCAAT
ATTTTTAAGTATCTACCTTTATACGTGGGATCGTTTCAAAAATAAATGGATACACTGGATATTAAATATTCCGATCATCA
TCGGTTCAACGTTAAGTGCATTATTTATCACAAGCGTCAACTCGTTTATGAATACACCACAAGGTTTCGATCTGAAGGAC
GGGGTACTGGTGAATATCGATCCGATTGCAGCGATGCTCAATCCTTCATTTTTCGTACGTGCATTCCATGTTGTAACAAC
AGGTGGCATGACGATTGCTTTCTGTGTGGCAAGTGTCGCGGCAGTGAAATTACTGAAGAATAAATTTGCTGAAGATAGAC
AGTATCATAAATCAGCACTTAATATGGCGATGATTGTCGGTTTAATCTTCAGTTTACTGACTATTCTTGCAGGTGACCTT
TCTGCGAAGTTCCTGCATAATGAACAGCCAGAGAAGCTTGCAGCGATGGAATGGCATTTCGAATCTGAGAAGCAAGCAGA
TCTCGTACTCTTCGGTGTACTGGATGACGAGACACATGAAGTTAAAGGTGCAATCAAGATTCCTGGTGTCTTAAGTTTTC
TGGCAGATAACAGCTTCGATACAGAAGTTAAAGGACTGAATGAATTTAAAGCAGATGAGCGTCCGCCGCTAATTATTCAT
TATTTCTTTGATTTGATGGTATTCTTCGGGATGTTCTCATTTGCTGTGAGTGTCCTTTATGTCATCTTGAAGAAAGTACG
TAATAAGATGAGTACGAACAACTTTATGCTTTATTTAATGGCACTTACAGGTCCGTTATGTATGCTTGCGATAGAGTTCG
GCTGGTTCTTAGCTGAGATGGGCAGACAGCCATGGTTACTTAGAGGATATATGAAAGTGGCTCAAGGCGTGACGCATGCA
GAAGGTGTCAGCTTAGTGCTTGTAGGATTTGGGTTACTTTATCTCATAATCGGATTCAGCTGTAGCTATGTGCTCATCAG
AATGTTCAAGGATAAGCCTGCAGCACGAGATATTGAAACGTATGAACTAACGTATAATGGGGGTAGAGCATAA

Upstream 100 bases:

>100_bases
AGATTTGTCATAAATAAGTGGTTCAATTACTTTAAAAAAGGAACAGAGTAATATACAATAAATATTATGTGAGTATTATC
ACAAAAGGAGGATTTTATAA

Downstream 100 bases:

>100_bases
TGGACTATCAACATATTGGAATACTCGTACTGTGGACGTTCTTATTCGGTTATATTATTCTCGGTGCCATTGATTTTGGT
GCAGGATTCTTTATACTGTA

Product: cytochrome D ubiquinol oxidase subunit I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MDGLVMSRILTAMTLGFHIIFATIGVGMPLMIMIAEGLGIKTGNMKYIALARRMAKAFTITVAVGVVTGTIIGLQLSLLW
PSFMKLGGQVIALPLFMETFAFFFEAIFLSIYLYTWDRFKNKWIHWILNIPIIIGSTLSALFITSVNSFMNTPQGFDLKD
GVLVNIDPIAAMLNPSFFVRAFHVVTTGGMTIAFCVASVAAVKLLKNKFAEDRQYHKSALNMAMIVGLIFSLLTILAGDL
SAKFLHNEQPEKLAAMEWHFESEKQADLVLFGVLDDETHEVKGAIKIPGVLSFLADNSFDTEVKGLNEFKADERPPLIIH
YFFDLMVFFGMFSFAVSVLYVILKKVRNKMSTNNFMLYLMALTGPLCMLAIEFGWFLAEMGRQPWLLRGYMKVAQGVTHA
EGVSLVLVGFGLLYLIIGFSCSYVLIRMFKDKPAARDIETYELTYNGGRA

Sequences:

>Translated_450_residues
MDGLVMSRILTAMTLGFHIIFATIGVGMPLMIMIAEGLGIKTGNMKYIALARRMAKAFTITVAVGVVTGTIIGLQLSLLW
PSFMKLGGQVIALPLFMETFAFFFEAIFLSIYLYTWDRFKNKWIHWILNIPIIIGSTLSALFITSVNSFMNTPQGFDLKD
GVLVNIDPIAAMLNPSFFVRAFHVVTTGGMTIAFCVASVAAVKLLKNKFAEDRQYHKSALNMAMIVGLIFSLLTILAGDL
SAKFLHNEQPEKLAAMEWHFESEKQADLVLFGVLDDETHEVKGAIKIPGVLSFLADNSFDTEVKGLNEFKADERPPLIIH
YFFDLMVFFGMFSFAVSVLYVILKKVRNKMSTNNFMLYLMALTGPLCMLAIEFGWFLAEMGRQPWLLRGYMKVAQGVTHA
EGVSLVLVGFGLLYLIIGFSCSYVLIRMFKDKPAARDIETYELTYNGGRA
>Mature_450_residues
MDGLVMSRILTAMTLGFHIIFATIGVGMPLMIMIAEGLGIKTGNMKYIALARRMAKAFTITVAVGVVTGTIIGLQLSLLW
PSFMKLGGQVIALPLFMETFAFFFEAIFLSIYLYTWDRFKNKWIHWILNIPIIIGSTLSALFITSVNSFMNTPQGFDLKD
GVLVNIDPIAAMLNPSFFVRAFHVVTTGGMTIAFCVASVAAVKLLKNKFAEDRQYHKSALNMAMIVGLIFSLLTILAGDL
SAKFLHNEQPEKLAAMEWHFESEKQADLVLFGVLDDETHEVKGAIKIPGVLSFLADNSFDTEVKGLNEFKADERPPLIIH
YFFDLMVFFGMFSFAVSVLYVILKKVRNKMSTNNFMLYLMALTGPLCMLAIEFGWFLAEMGRQPWLLRGYMKVAQGVTHA
EGVSLVLVGFGLLYLIIGFSCSYVLIRMFKDKPAARDIETYELTYNGGRA

Specific function: Probable cytochrome [H]

COG id: COG1271

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome ubiquinol oxidase subunit 1 family [H]

Homologues:

Organism=Escherichia coli, GI87081779, Length=320, Percent_Identity=30.625, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1787212, Length=323, Percent_Identity=30.3405572755418, Blast_Score=129, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002585 [H]

Pfam domain/function: PF01654 Bac_Ubq_Cox [H]

EC number: 1.10.3.-

Molecular weight: Translated: 50215; Mature: 50215

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure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HHHHHHHHHHCCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]