| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is purC
Identifier: 222150939
GI number: 222150939
Start: 741524
End: 742225
Strand: Direct
Name: purC
Synonym: MCCL_0689
Alternate gene names: 222150939
Gene position: 741524-742225 (Clockwise)
Preceding gene: 222150938
Following gene: 222150940
Centisome position: 35.27
GC content: 42.17
Gene sequence:
>702_bases ATGACCTTAGTTTATGAAGGAAAAGCAAAGCGTGTATACAGTACGGATGAGGACCATGTGTTCCGCATCGAATACAAGGA TGAAGTAACAGCGGGCAACGGTGCAAAGAAAGATAATATGGCTGGTAAAGGTCGACTGAACAACTTGATTACAAGCTATT TCTTCGAGCGCCTTGCACGACAAGGGCTGGAGTCTCACTTTATCAAGAAGTTAAGCGACACTGAACAGCTGGTTAAAGCA GTTACGATTATTCCGCTTGAAGTTGTTGTCAGAAACTATGCTGCAGGTTCAATTGTCAAGCGTCTCGGTTTTGACAAAGG TGTGCAGTTCAAATCACCGCTTGTAGAGTTCTATTATAAGGAAGATGCACTGAATGATCCAATTATTACAGATGACCACG TGAAGTTACTCGGCATTGCAGATGATGACGACATCGCTGAACTGAAACGTCAGGCGTTAATCATCAATGACATGCTCGTG AAGATGATGGATGAGATGAATTTGCAGCTGATCGATTTCAAGATTGAATTCGGTAAGGACCAGGACGGTAATATCCTGCT TGCAGACGAAATTTCACCGGATACTTGCCGCATCTGGGATAAGGACACGAAAGAAAACTTTGATAAAGACGTATACAGAG AAGACACAGGTTCACTGATTGATACTTATACTCAATTCTATAATAAGCTGGAGGCACTATAA
Upstream 100 bases:
>100_bases GTAAAGAGGCAAGGAAAGAAAACAGGAAGATGGGACATATTACCCTTTTGTTAGACGATGACACGGATACTTATTATCCT ATATATAAGGAGCTGATGAA
Downstream 100 bases:
>100_bases AATGACTAAAATCGAATTACACATCACATTACAACCACAGGTATTAGACACACAAGGACAAACGTTAACACGTGCGGTAC ATGATCTGGGCTACACTCAA
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MTLVYEGKAKRVYSTDEDHVFRIEYKDEVTAGNGAKKDNMAGKGRLNNLITSYFFERLARQGLESHFIKKLSDTEQLVKA VTIIPLEVVVRNYAAGSIVKRLGFDKGVQFKSPLVEFYYKEDALNDPIITDDHVKLLGIADDDDIAELKRQALIINDMLV KMMDEMNLQLIDFKIEFGKDQDGNILLADEISPDTCRIWDKDTKENFDKDVYREDTGSLIDTYTQFYNKLEAL
Sequences:
>Translated_233_residues MTLVYEGKAKRVYSTDEDHVFRIEYKDEVTAGNGAKKDNMAGKGRLNNLITSYFFERLARQGLESHFIKKLSDTEQLVKA VTIIPLEVVVRNYAAGSIVKRLGFDKGVQFKSPLVEFYYKEDALNDPIITDDHVKLLGIADDDDIAELKRQALIINDMLV KMMDEMNLQLIDFKIEFGKDQDGNILLADEISPDTCRIWDKDTKENFDKDVYREDTGSLIDTYTQFYNKLEAL >Mature_232_residues TLVYEGKAKRVYSTDEDHVFRIEYKDEVTAGNGAKKDNMAGKGRLNNLITSYFFERLARQGLESHFIKKLSDTEQLVKAV TIIPLEVVVRNYAAGSIVKRLGFDKGVQFKSPLVEFYYKEDALNDPIITDDHVKLLGIADDDDIAELKRQALIINDMLVK MMDEMNLQLIDFKIEFGKDQDGNILLADEISPDTCRIWDKDTKENFDKDVYREDTGSLIDTYTQFYNKLEAL
Specific function: De novo purine biosynthesis; seventh step. [C]
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family
Homologues:
Organism=Homo sapiens, GI119220557, Length=223, Percent_Identity=35.8744394618834, Blast_Score=124, Evalue=7e-29, Organism=Homo sapiens, GI5453539, Length=223, Percent_Identity=35.8744394618834, Blast_Score=124, Evalue=7e-29, Organism=Homo sapiens, GI119220559, Length=230, Percent_Identity=34.3478260869565, Blast_Score=114, Evalue=1e-25, Organism=Escherichia coli, GI1788820, Length=227, Percent_Identity=39.647577092511, Blast_Score=189, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17531275, Length=224, Percent_Identity=37.0535714285714, Blast_Score=129, Evalue=1e-30, Organism=Drosophila melanogaster, GI18860083, Length=220, Percent_Identity=33.1818181818182, Blast_Score=124, Evalue=5e-29, Organism=Drosophila melanogaster, GI24583917, Length=219, Percent_Identity=31.0502283105023, Blast_Score=109, Evalue=1e-24,
Paralogues:
None
Copy number: 1680 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 13,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): PUR7_MACCJ (B9EAY5)
Other databases:
- EMBL: AP009484 - RefSeq: YP_002560092.1 - ProteinModelPortal: B9EAY5 - GeneID: 7389886 - GenomeReviews: AP009484_GR - KEGG: mcl:MCCL_0689 - OMA: YKDDALG - ProtClustDB: PRK09362 - HAMAP: MF_00137 - InterPro: IPR013816 - InterPro: IPR001636 - InterPro: IPR018236 - Gene3D: G3DSA:3.30.470.20 - PANTHER: PTHR11609 - TIGRFAMs: TIGR00081
Pfam domain/function: PF01259 SAICAR_synt
EC number: =6.3.2.6
Molecular weight: Translated: 26755; Mature: 26624
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS01057 SAICAR_SYNTHETASE_1; PS01058 SAICAR_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLVYEGKAKRVYSTDEDHVFRIEYKDEVTAGNGAKKDNMAGKGRLNNLITSYFFERLAR CEEEECCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH QGLESHFIKKLSDTEQLVKAVTIIPLEVVVRNYAAGSIVKRLGFDKGVQFKSPLVEFYYK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH EDALNDPIITDDHVKLLGIADDDDIAELKRQALIINDMLVKMMDEMNLQLIDFKIEFGKD HCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCC QDGNILLADEISPDTCRIWDKDTKENFDKDVYREDTGSLIDTYTQFYNKLEAL CCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TLVYEGKAKRVYSTDEDHVFRIEYKDEVTAGNGAKKDNMAGKGRLNNLITSYFFERLAR EEEECCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH QGLESHFIKKLSDTEQLVKAVTIIPLEVVVRNYAAGSIVKRLGFDKGVQFKSPLVEFYYK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH EDALNDPIITDDHVKLLGIADDDDIAELKRQALIINDMLVKMMDEMNLQLIDFKIEFGKD HCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCC QDGNILLADEISPDTCRIWDKDTKENFDKDVYREDTGSLIDTYTQFYNKLEAL CCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA