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The map label for this gene is ywqD [H]

Identifier: 222150919

GI number: 222150919

Start: 721844

End: 722524

Strand: Direct

Name: ywqD [H]

Synonym: MCCL_0669

Alternate gene names: 222150919

Gene position: 721844-722524 (Clockwise)

Preceding gene: 222150918

Following gene: 222150920

Centisome position: 34.34

GC content: 36.27

Gene sequence:

>681_bases
TTGTTTAAGAGAAAAAGTAACTTAACACAACTACCTAAACAAAGAAAATTAATAACACATCTGTATCCTAAATCAACAGT
CAGTGAACAATATCGTATGATTCGTTCGAACATTATGTTCTCTGGGGTTGACAAAGAAATAAAGAAGCTCGTTGTAACCT
CTGCAGCACCTTCAGCTGGTAAATCAACAACTGCTGCTAATATTGCTGTAGCTTATGCACAGGCAGGAAAGAAAGTCTTG
CTGATTGACGGCGATCTAAGAAAACCAACGGTTCAATATACATTTGAAACGAAGAATGTCTTCGGATTATCTAACTTAAT
TACAGATCAAATAGGGCTGGAACAAGCTGTGCAAAACACACCAGTTGAAAACCTATCGATTATGACTTCAGGACCAATTC
CACCAAATCCTAGTGAATTATTAGCTTCTAAGCGCTTTAAAGAATTAATCTCAAATTTCGAAGATCACTTTGATATGATC
ATCATTGATACTCCACCAGTTCTAGCAGTTACAGATGCGGTAATCATGTCTAATGTGGTTGATGGCACGATACTAGTTAC
CAATGTAGAGACAAATAATAAGCATCATTTGGTTAAAGCGAAAGAAGTGTTACAGAAATCTGATGCAAACATACTTGGAG
TAGTTCTGAACAATGTCGAGAAATCATCAACAGATGACTAA

Upstream 100 bases:

>100_bases
GAACAGAAGAAGAAGTACAAGAGATACTAGGTTTACCAGTGATTGGTACGATTCCGCACTTCGATGACAAAACTTTAAAA
TAGAAAGATGGGTGAATATA

Downstream 100 bases:

>100_bases
TACTATTATGAATACTATGGCAAATCAAATTAACAGAAAGGAACAACTTTATGACAGCTAAAAAAAGGTTAATGTTCTTA
ATTTTTTTAGATTCAATCAT

Product: capsular polysaccharide biosynthesis protein CapB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MFKRKSNLTQLPKQRKLITHLYPKSTVSEQYRMIRSNIMFSGVDKEIKKLVVTSAAPSAGKSTTAANIAVAYAQAGKKVL
LIDGDLRKPTVQYTFETKNVFGLSNLITDQIGLEQAVQNTPVENLSIMTSGPIPPNPSELLASKRFKELISNFEDHFDMI
IIDTPPVLAVTDAVIMSNVVDGTILVTNVETNNKHHLVKAKEVLQKSDANILGVVLNNVEKSSTDD

Sequences:

>Translated_226_residues
MFKRKSNLTQLPKQRKLITHLYPKSTVSEQYRMIRSNIMFSGVDKEIKKLVVTSAAPSAGKSTTAANIAVAYAQAGKKVL
LIDGDLRKPTVQYTFETKNVFGLSNLITDQIGLEQAVQNTPVENLSIMTSGPIPPNPSELLASKRFKELISNFEDHFDMI
IIDTPPVLAVTDAVIMSNVVDGTILVTNVETNNKHHLVKAKEVLQKSDANILGVVLNNVEKSSTDD
>Mature_226_residues
MFKRKSNLTQLPKQRKLITHLYPKSTVSEQYRMIRSNIMFSGVDKEIKKLVVTSAAPSAGKSTTAANIAVAYAQAGKKVL
LIDGDLRKPTVQYTFETKNVFGLSNLITDQIGLEQAVQNTPVENLSIMTSGPIPPNPSELLASKRFKELISNFEDHFDMI
IIDTPPVLAVTDAVIMSNVVDGTILVTNVETNNKHHLVKAKEVLQKSDANILGVVLNNVEKSSTDD

Specific function: May be involved in the regulation of capsular polysaccharide biosynthesis. Autophosphorylates in vitro. Phosphorylates and activates in vitro two UDP-glucose dehydrogenases, YwqF and TuaD, as well as the DNA-binding proteins Ssb and SsbB [H]

COG id: COG0489

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsD/CapB family [H]

Homologues:

Organism=Escherichia coli, GI1787216, Length=202, Percent_Identity=33.1683168316832, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI87082032, Length=212, Percent_Identity=33.4905660377358, Blast_Score=132, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR005702 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: =2.7.10.2 [H]

Molecular weight: Translated: 24834; Mature: 24834

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKRKSNLTQLPKQRKLITHLYPKSTVSEQYRMIRSNIMFSGVDKEIKKLVVTSAAPSAG
CCCCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
KSTTAANIAVAYAQAGKKVLLIDGDLRKPTVQYTFETKNVFGLSNLITDQIGLEQAVQNT
CCCCHHHHEEEEECCCCEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCC
PVENLSIMTSGPIPPNPSELLASKRFKELISNFEDHFDMIIIDTPPVLAVTDAVIMSNVV
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHC
DGTILVTNVETNNKHHLVKAKEVLQKSDANILGVVLNNVEKSSTDD
CCEEEEEEECCCCCEEHHHHHHHHHHCCCCEEEEEHHCCCCCCCCC
>Mature Secondary Structure
MFKRKSNLTQLPKQRKLITHLYPKSTVSEQYRMIRSNIMFSGVDKEIKKLVVTSAAPSAG
CCCCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
KSTTAANIAVAYAQAGKKVLLIDGDLRKPTVQYTFETKNVFGLSNLITDQIGLEQAVQNT
CCCCHHHHEEEEECCCCEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCC
PVENLSIMTSGPIPPNPSELLASKRFKELISNFEDHFDMIIIDTPPVLAVTDAVIMSNVV
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHC
DGTILVTNVETNNKHHLVKAKEVLQKSDANILGVVLNNVEKSSTDD
CCEEEEEEECCCCCEEHHHHHHHHHHCCCCEEEEEHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]