Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

Click here to switch to the map view.

The map label for this gene is yueF [H]

Identifier: 222150878

GI number: 222150878

Start: 671073

End: 672203

Strand: Direct

Name: yueF [H]

Synonym: MCCL_0628

Alternate gene names: 222150878

Gene position: 671073-672203 (Clockwise)

Preceding gene: 222150875

Following gene: 222150881

Centisome position: 31.92

GC content: 38.28

Gene sequence:

>1131_bases
ATGAGAAATAAAGATAATTTGGAGGAATTTATGACAAATAAAGTTTGGTTCAGATTCGGTGTAGGGCTTCTGCTTACATT
TTTAATCATCAAGTATTTCTTAGAGATTAACCATATCTTCTACCCGATCATCATCATCGTAAAATCTATTATTCTGCCGT
TATTACTCGGTGGCTTTCTGTACTATATTGTAGTACCATTCCAGGATAAGCTGGAAGAAAAACGACATTTAAAACGCTGG
CAAAGTGTTACATTAATCATGATTGCATTGTGTTTAATTATCGGCCTATTATTCTCGTTTGTAGGCCCTATTGTATCAAA
GCAGACAAACAATTTCATACATAACTATCCGGCAATTCAAAGGGAATTTCAATCGTATGTAAGCTTAGCACTAGATCAGC
GTGATAAGTTACCTGAGAATGTCAAAGACGGGATCAATAATGGGATAGAGAAGCTGAACGAATATTCAGGGAAGATTGTG
ACGAACGCGTTCTCTTTTATTACACAGTTCATCTCTACGCTGTTCTTATTAATCTTAGTACCATTCTTCTTAATCTATAT
GCTGAAAGATCACGACCGCTTCGTGCCTTTTGTATCAGCGCCGTTTACAGGGAAACGCAAGGTGTTCGTTGTAAATTTGT
TCAAAGATATTGATAAGACGTTACGTTCATATATTCAAGGGCAGGTGACAGTCAGCATCATCCTGGGGTTACTGCTCCTT
GCCGGCTACTTGGTCATTGGATTAGATTATGCTGTAATTCTTGCGATGTGGGGCATGGTAACGAACTTAATTCCATTCCT
AGGACCTTATATGGCGGTAATACCTGCCATTATTATTGCGTTGATCCAAGATCCTGTTATGGCGATCTACGTGATTATTA
TTATGTTTGTGGCCCAGCAGTTAGAAGGGAATGTCATTACACCGAATATTATGGGTAAGACATTGAATATGCACCCGTTA
ACCATTATTACGGTCATCCTTGCAGCTGGAAACCTTGGTGGTTTCTTTGCTATCTTAGTCGCAGTACCAACTTATGCTGT
GTTAAAGACCATCGTAAGAAATTTCTATATGCATCGACAGGAGATTACTTCTGAAGCGAATAAGATTGTTAAAGAACGAC
ATATGAGGTAA

Upstream 100 bases:

>100_bases
TATAATCACTCCTTTAGTTTACATATATTATACAACTTTACATCAATTTTTATGAAAAGGATTTTTCAAATTGTGATAAA
CAGGAGGAATCTGGGGTATA

Downstream 100 bases:

>100_bases
CCCGAGATATTAAGCACCAGTCTAGAAACGCTTATTCCATTTCTAGAAGCGTTAATAGAAGAACATAAAGGAAAATAAAG
AATGACCGCCACAGAATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MRNKDNLEEFMTNKVWFRFGVGLLLTFLIIKYFLEINHIFYPIIIIVKSIILPLLLGGFLYYIVVPFQDKLEEKRHLKRW
QSVTLIMIALCLIIGLLFSFVGPIVSKQTNNFIHNYPAIQREFQSYVSLALDQRDKLPENVKDGINNGIEKLNEYSGKIV
TNAFSFITQFISTLFLLILVPFFLIYMLKDHDRFVPFVSAPFTGKRKVFVVNLFKDIDKTLRSYIQGQVTVSIILGLLLL
AGYLVIGLDYAVILAMWGMVTNLIPFLGPYMAVIPAIIIALIQDPVMAIYVIIIMFVAQQLEGNVITPNIMGKTLNMHPL
TIITVILAAGNLGGFFAILVAVPTYAVLKTIVRNFYMHRQEITSEANKIVKERHMR

Sequences:

>Translated_376_residues
MRNKDNLEEFMTNKVWFRFGVGLLLTFLIIKYFLEINHIFYPIIIIVKSIILPLLLGGFLYYIVVPFQDKLEEKRHLKRW
QSVTLIMIALCLIIGLLFSFVGPIVSKQTNNFIHNYPAIQREFQSYVSLALDQRDKLPENVKDGINNGIEKLNEYSGKIV
TNAFSFITQFISTLFLLILVPFFLIYMLKDHDRFVPFVSAPFTGKRKVFVVNLFKDIDKTLRSYIQGQVTVSIILGLLLL
AGYLVIGLDYAVILAMWGMVTNLIPFLGPYMAVIPAIIIALIQDPVMAIYVIIIMFVAQQLEGNVITPNIMGKTLNMHPL
TIITVILAAGNLGGFFAILVAVPTYAVLKTIVRNFYMHRQEITSEANKIVKERHMR
>Mature_376_residues
MRNKDNLEEFMTNKVWFRFGVGLLLTFLIIKYFLEINHIFYPIIIIVKSIILPLLLGGFLYYIVVPFQDKLEEKRHLKRW
QSVTLIMIALCLIIGLLFSFVGPIVSKQTNNFIHNYPAIQREFQSYVSLALDQRDKLPENVKDGINNGIEKLNEYSGKIV
TNAFSFITQFISTLFLLILVPFFLIYMLKDHDRFVPFVSAPFTGKRKVFVVNLFKDIDKTLRSYIQGQVTVSIILGLLLL
AGYLVIGLDYAVILAMWGMVTNLIPFLGPYMAVIPAIIIALIQDPVMAIYVIIIMFVAQQLEGNVITPNIMGKTLNMHPL
TIITVILAAGNLGGFFAILVAVPTYAVLKTIVRNFYMHRQEITSEANKIVKERHMR

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=332, Percent_Identity=23.4939759036145, Blast_Score=105, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 42944; Mature: 42944

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]