| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is yueF [H]
Identifier: 222150878
GI number: 222150878
Start: 671073
End: 672203
Strand: Direct
Name: yueF [H]
Synonym: MCCL_0628
Alternate gene names: 222150878
Gene position: 671073-672203 (Clockwise)
Preceding gene: 222150875
Following gene: 222150881
Centisome position: 31.92
GC content: 38.28
Gene sequence:
>1131_bases ATGAGAAATAAAGATAATTTGGAGGAATTTATGACAAATAAAGTTTGGTTCAGATTCGGTGTAGGGCTTCTGCTTACATT TTTAATCATCAAGTATTTCTTAGAGATTAACCATATCTTCTACCCGATCATCATCATCGTAAAATCTATTATTCTGCCGT TATTACTCGGTGGCTTTCTGTACTATATTGTAGTACCATTCCAGGATAAGCTGGAAGAAAAACGACATTTAAAACGCTGG CAAAGTGTTACATTAATCATGATTGCATTGTGTTTAATTATCGGCCTATTATTCTCGTTTGTAGGCCCTATTGTATCAAA GCAGACAAACAATTTCATACATAACTATCCGGCAATTCAAAGGGAATTTCAATCGTATGTAAGCTTAGCACTAGATCAGC GTGATAAGTTACCTGAGAATGTCAAAGACGGGATCAATAATGGGATAGAGAAGCTGAACGAATATTCAGGGAAGATTGTG ACGAACGCGTTCTCTTTTATTACACAGTTCATCTCTACGCTGTTCTTATTAATCTTAGTACCATTCTTCTTAATCTATAT GCTGAAAGATCACGACCGCTTCGTGCCTTTTGTATCAGCGCCGTTTACAGGGAAACGCAAGGTGTTCGTTGTAAATTTGT TCAAAGATATTGATAAGACGTTACGTTCATATATTCAAGGGCAGGTGACAGTCAGCATCATCCTGGGGTTACTGCTCCTT GCCGGCTACTTGGTCATTGGATTAGATTATGCTGTAATTCTTGCGATGTGGGGCATGGTAACGAACTTAATTCCATTCCT AGGACCTTATATGGCGGTAATACCTGCCATTATTATTGCGTTGATCCAAGATCCTGTTATGGCGATCTACGTGATTATTA TTATGTTTGTGGCCCAGCAGTTAGAAGGGAATGTCATTACACCGAATATTATGGGTAAGACATTGAATATGCACCCGTTA ACCATTATTACGGTCATCCTTGCAGCTGGAAACCTTGGTGGTTTCTTTGCTATCTTAGTCGCAGTACCAACTTATGCTGT GTTAAAGACCATCGTAAGAAATTTCTATATGCATCGACAGGAGATTACTTCTGAAGCGAATAAGATTGTTAAAGAACGAC ATATGAGGTAA
Upstream 100 bases:
>100_bases TATAATCACTCCTTTAGTTTACATATATTATACAACTTTACATCAATTTTTATGAAAAGGATTTTTCAAATTGTGATAAA CAGGAGGAATCTGGGGTATA
Downstream 100 bases:
>100_bases CCCGAGATATTAAGCACCAGTCTAGAAACGCTTATTCCATTTCTAGAAGCGTTAATAGAAGAACATAAAGGAAAATAAAG AATGACCGCCACAGAATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MRNKDNLEEFMTNKVWFRFGVGLLLTFLIIKYFLEINHIFYPIIIIVKSIILPLLLGGFLYYIVVPFQDKLEEKRHLKRW QSVTLIMIALCLIIGLLFSFVGPIVSKQTNNFIHNYPAIQREFQSYVSLALDQRDKLPENVKDGINNGIEKLNEYSGKIV TNAFSFITQFISTLFLLILVPFFLIYMLKDHDRFVPFVSAPFTGKRKVFVVNLFKDIDKTLRSYIQGQVTVSIILGLLLL AGYLVIGLDYAVILAMWGMVTNLIPFLGPYMAVIPAIIIALIQDPVMAIYVIIIMFVAQQLEGNVITPNIMGKTLNMHPL TIITVILAAGNLGGFFAILVAVPTYAVLKTIVRNFYMHRQEITSEANKIVKERHMR
Sequences:
>Translated_376_residues MRNKDNLEEFMTNKVWFRFGVGLLLTFLIIKYFLEINHIFYPIIIIVKSIILPLLLGGFLYYIVVPFQDKLEEKRHLKRW QSVTLIMIALCLIIGLLFSFVGPIVSKQTNNFIHNYPAIQREFQSYVSLALDQRDKLPENVKDGINNGIEKLNEYSGKIV TNAFSFITQFISTLFLLILVPFFLIYMLKDHDRFVPFVSAPFTGKRKVFVVNLFKDIDKTLRSYIQGQVTVSIILGLLLL AGYLVIGLDYAVILAMWGMVTNLIPFLGPYMAVIPAIIIALIQDPVMAIYVIIIMFVAQQLEGNVITPNIMGKTLNMHPL TIITVILAAGNLGGFFAILVAVPTYAVLKTIVRNFYMHRQEITSEANKIVKERHMR >Mature_376_residues MRNKDNLEEFMTNKVWFRFGVGLLLTFLIIKYFLEINHIFYPIIIIVKSIILPLLLGGFLYYIVVPFQDKLEEKRHLKRW QSVTLIMIALCLIIGLLFSFVGPIVSKQTNNFIHNYPAIQREFQSYVSLALDQRDKLPENVKDGINNGIEKLNEYSGKIV TNAFSFITQFISTLFLLILVPFFLIYMLKDHDRFVPFVSAPFTGKRKVFVVNLFKDIDKTLRSYIQGQVTVSIILGLLLL AGYLVIGLDYAVILAMWGMVTNLIPFLGPYMAVIPAIIIALIQDPVMAIYVIIIMFVAQQLEGNVITPNIMGKTLNMHPL TIITVILAAGNLGGFFAILVAVPTYAVLKTIVRNFYMHRQEITSEANKIVKERHMR
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0118 (perM) family [H]
Homologues:
Organism=Escherichia coli, GI1788838, Length=332, Percent_Identity=23.4939759036145, Blast_Score=105, Evalue=6e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002549 [H]
Pfam domain/function: PF01594 UPF0118 [H]
EC number: NA
Molecular weight: Translated: 42944; Mature: 42944
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNKDNLEEFMTNKVWFRFGVGLLLTFLIIKYFLEINHIFYPIIIIVKSIILPLLLGGFL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YYIVVPFQDKLEEKRHLKRWQSVTLIMIALCLIIGLLFSFVGPIVSKQTNNFIHNYPAIQ HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHH REFQSYVSLALDQRDKLPENVKDGINNGIEKLNEYSGKIVTNAFSFITQFISTLFLLILV HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH PFFLIYMLKDHDRFVPFVSAPFTGKRKVFVVNLFKDIDKTLRSYIQGQVTVSIILGLLLL HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGYLVIGLDYAVILAMWGMVTNLIPFLGPYMAVIPAIIIALIQDPVMAIYVIIIMFVAQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEGNVITPNIMGKTLNMHPLTIITVILAAGNLGGFFAILVAVPTYAVLKTIVRNFYMHRQ HCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EITSEANKIVKERHMR HHHHHHHHHHHHHCCC >Mature Secondary Structure MRNKDNLEEFMTNKVWFRFGVGLLLTFLIIKYFLEINHIFYPIIIIVKSIILPLLLGGFL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YYIVVPFQDKLEEKRHLKRWQSVTLIMIALCLIIGLLFSFVGPIVSKQTNNFIHNYPAIQ HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHH REFQSYVSLALDQRDKLPENVKDGINNGIEKLNEYSGKIVTNAFSFITQFISTLFLLILV HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH PFFLIYMLKDHDRFVPFVSAPFTGKRKVFVVNLFKDIDKTLRSYIQGQVTVSIILGLLLL HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGYLVIGLDYAVILAMWGMVTNLIPFLGPYMAVIPAIIIALIQDPVMAIYVIIIMFVAQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEGNVITPNIMGKTLNMHPLTIITVILAAGNLGGFFAILVAVPTYAVLKTIVRNFYMHRQ HCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EITSEANKIVKERHMR HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]