Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

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The map label for this gene is yjbG [H]

Identifier: 222150865

GI number: 222150865

Start: 659883

End: 660566

Strand: Direct

Name: yjbG [H]

Synonym: MCCL_0615

Alternate gene names: 222150865

Gene position: 659883-660566 (Clockwise)

Preceding gene: 222150864

Following gene: 222150869

Centisome position: 31.39

GC content: 38.16

Gene sequence:

>684_bases
ATGAACTGGACAGATAGTGTGAACAATACATTTACCTTGACGCATGAATTTGGACATAGTGCACATAGTTATTTCTCAAG
AAATAATCAGCCATCTAATATGTCAGGCTATTCTATCTTCGTAGCGGAAGTTGCTTCAACTTGTAACGAAGCATTGCTTG
CTGATTATATGTACAAGCATCTGGACGATGATAAGAAGAAGCTCTACTTACTGAACTACCAGTTAGATGGATTCCGCGGT
ACAGTGTTCAGACAGACAATGTTTGCAGAGTTTGAATATTTAATCCATACACTTGCTGAACAGAATGAACCGTTGACAGC
AGAGCGACTAAACGCAGAGTACCGCAAGTTAAACGAGAAGTATTACGGTGACGCTGTAATTACGGATGACTATATTCAGT
ATGAGTGGAGCAGAATTCCACATTTCTATTACAATTACTATGTATATCAATATGCAACAGGATATAGTGCGGCATACGCT
TTAAGTAAGAAGATTTTAGAAGAGGGACAACCAGCTGTTGATAAGTATATCAATGAATTCCTGAAAGCCGGAAGTTCTGA
TTATCCGATCGAAGTGCTGAAGAAAGCAGGTGTCGATATGAACGAAAAAACACCAATTGAAAATGCATGTAAAGTATTTG
AAGAACGTCTGGATGCTTTTGAAGCATTGATTAAAAGGTCGTAA

Upstream 100 bases:

>100_bases
GATTAACGAATCGCTGGGTCGATGCTGTTATCGAGAATAAGGGTCCAAGAGAAGCGGAGCATACTCTTCAGGTACGTTCG
GTACTAATCCATTCATCTTA

Downstream 100 bases:

>100_bases
ACACTCGCGAACAGACACGCATAAAATCACGAAAAGACGCAAAAGCAATGATTTTTGTTGCTCGTGTCTTTTTGATTTTA
TCGAAGTGTCTGCGAGTGGA

Product: ThiMet oligopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MNWTDSVNNTFTLTHEFGHSAHSYFSRNNQPSNMSGYSIFVAEVASTCNEALLADYMYKHLDDDKKKLYLLNYQLDGFRG
TVFRQTMFAEFEYLIHTLAEQNEPLTAERLNAEYRKLNEKYYGDAVITDDYIQYEWSRIPHFYYNYYVYQYATGYSAAYA
LSKKILEEGQPAVDKYINEFLKAGSSDYPIEVLKKAGVDMNEKTPIENACKVFEERLDAFEALIKRS

Sequences:

>Translated_227_residues
MNWTDSVNNTFTLTHEFGHSAHSYFSRNNQPSNMSGYSIFVAEVASTCNEALLADYMYKHLDDDKKKLYLLNYQLDGFRG
TVFRQTMFAEFEYLIHTLAEQNEPLTAERLNAEYRKLNEKYYGDAVITDDYIQYEWSRIPHFYYNYYVYQYATGYSAAYA
LSKKILEEGQPAVDKYINEFLKAGSSDYPIEVLKKAGVDMNEKTPIENACKVFEERLDAFEALIKRS
>Mature_227_residues
MNWTDSVNNTFTLTHEFGHSAHSYFSRNNQPSNMSGYSIFVAEVASTCNEALLADYMYKHLDDDKKKLYLLNYQLDGFRG
TVFRQTMFAEFEYLIHTLAEQNEPLTAERLNAEYRKLNEKYYGDAVITDDYIQYEWSRIPHFYYNYYVYQYATGYSAAYA
LSKKILEEGQPAVDKYINEFLKAGSSDYPIEVLKKAGVDMNEKTPIENACKVFEERLDAFEALIKRS

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 26514; Mature: 26514

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWTDSVNNTFTLTHEFGHSAHSYFSRNNQPSNMSGYSIFVAEVASTCNEALLADYMYKH
CCCCCCCCCEEEEEHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LDDDKKKLYLLNYQLDGFRGTVFRQTMFAEFEYLIHTLAEQNEPLTAERLNAEYRKLNEK
CCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
YYGDAVITDDYIQYEWSRIPHFYYNYYVYQYATGYSAAYALSKKILEEGQPAVDKYINEF
HCCCEEEECHHHHHHHHHCCHHHHHEEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHH
LKAGSSDYPIEVLKKAGVDMNEKTPIENACKVFEERLDAFEALIKRS
HHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNWTDSVNNTFTLTHEFGHSAHSYFSRNNQPSNMSGYSIFVAEVASTCNEALLADYMYKH
CCCCCCCCCEEEEEHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LDDDKKKLYLLNYQLDGFRGTVFRQTMFAEFEYLIHTLAEQNEPLTAERLNAEYRKLNEK
CCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
YYGDAVITDDYIQYEWSRIPHFYYNYYVYQYATGYSAAYALSKKILEEGQPAVDKYINEF
HCCCEEEECHHHHHHHHHCCHHHHHEEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHH
LKAGSSDYPIEVLKKAGVDMNEKTPIENACKVFEERLDAFEALIKRS
HHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]