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The map label for this gene is sufB [H]

Identifier: 222150796

GI number: 222150796

Start: 584256

End: 585653

Strand: Direct

Name: sufB [H]

Synonym: MCCL_0546

Alternate gene names: 222150796

Gene position: 584256-585653 (Clockwise)

Preceding gene: 222150795

Following gene: 222150797

Centisome position: 27.79

GC content: 37.7

Gene sequence:

>1398_bases
TTGGCTAAAAAAGCACCTGAAGTTGGAGATTACAAATATGGTTTCCACGATAAAGACGTATCGATTTTCCGTTCAGAAAG
AGGATTAACAGAGGATATTGTACGTGAAATTTCAAAGATGAAAGAAGAACCTCAGTGGATGTTAGACTTCCGCTTAAAAT
CATTAAAACAGTTCTATAAGATGCCGATGCCAACATGGGGTGGAGATCTATCTGAACTTAACTTTGATGAAATTACGTAT
TACGTAAAACCATCTGAGCATACAGAGCGTTCATGGGATGAAGTACCGGAAGAAATTAAACAGACGTTTGATAAATTAGG
TATTCCAGAAGCTGAACAGAAATATCTTGCAGGGGTATCAGCGCAATATGAATCAGAAGTTGTATACCACAACATGCAGG
AAGATTTAGAAGAACAAGGTATTATCTTTAAAGATACGGATTCAGCATTACGTGAAAACGAAGATATCTTCAAAGAACAC
TTTGCATCAGTAATTCCACCTGCAGATAATAAGTTCGCAGCGTTAAACTCAGCAGTATGGTCTGGTGGATCATTCATTTA
CGTTCCTAAGAACGTTAAACTTGAAACACCACTTCAAGCATACTTCCGTATTAACTCTGAGAATATGGGTCAGTTTGAGC
GTACATTAATTATCGTTGATGAAGGCGCAAGTGTACATTACGTTGAAGGTTGTACAGCACCTGTCTATACGACGAATTCA
TTGCACTCAGCAGTCGTTGAAATTATCGTTAAAAAAGATGCGTACTGCCGTTATACAACAATTCAGAACTGGGCGAACAA
CGTATTCAACTTAGTTACGAAACGTACTTTCGTCTATGAGAATGGAACGATGGAATGGATTGATGGGAACATTGGTTCTA
AACTTACGATGAAATACCCAGCATGTTACCTACTAGGTGAAGGTGCACGTGGTATGACATTGTCTATTGCTTTAGCAGGT
AAAGGACAAGTTCAGGATGCTGGAGCGAAGATGATGCATATGGCACCGAATACTTCTTCTACAATTGTTTCGAAATCAAT
TTCAAAACAAGGTGGTAAAGTAGTATACCGTGGTATCGTTCACTTCGGACGTAAAGCGACGGGTGCACGTTCAAATATCG
AATGTGATACATTAATTATGGATAATGAATCAACATCAGATACAATTCCTTACAACGAAATGTTAAATGATAACATTTCA
TTAGAACATGAAGCGAAAGTTTCAAAAGTATCTGAAGAACAACTATTCTATTTAATGAGTCGTGGTATATCTGAAGAAGA
AGCGACTGAAATGATCGTAATGGGCTTCATTGAGCCATTTACAAAAGAATTACCGATGGAATACGCAGTTGAGATGAACC
GTTTAATTAAATTCGAAATGGAAGGCTCGATTGGATAA

Upstream 100 bases:

>100_bases
CGACACTTGCCTGGAAAGCTTTGGAACGTGGCACGAAAGAAAACAATGATACACATGTCAGTGAAGAAATAGATGAATAA
AATAAAAGGAGTGACGTCAA

Downstream 100 bases:

>100_bases
TATTCACAAATAAAAAGATTGGGGTGACCCAATCTTTTTATTTTTTCTAATTATCTATAGATTTTACGTGGAAGTTATTA
TAAGATTTTAATGTTGATAT

Product: FeS assembly protein SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MAKKAPEVGDYKYGFHDKDVSIFRSERGLTEDIVREISKMKEEPQWMLDFRLKSLKQFYKMPMPTWGGDLSELNFDEITY
YVKPSEHTERSWDEVPEEIKQTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMQEDLEEQGIIFKDTDSALRENEDIFKEH
FASVIPPADNKFAALNSAVWSGGSFIYVPKNVKLETPLQAYFRINSENMGQFERTLIIVDEGASVHYVEGCTAPVYTTNS
LHSAVVEIIVKKDAYCRYTTIQNWANNVFNLVTKRTFVYENGTMEWIDGNIGSKLTMKYPACYLLGEGARGMTLSIALAG
KGQVQDAGAKMMHMAPNTSSTIVSKSISKQGGKVVYRGIVHFGRKATGARSNIECDTLIMDNESTSDTIPYNEMLNDNIS
LEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG

Sequences:

>Translated_465_residues
MAKKAPEVGDYKYGFHDKDVSIFRSERGLTEDIVREISKMKEEPQWMLDFRLKSLKQFYKMPMPTWGGDLSELNFDEITY
YVKPSEHTERSWDEVPEEIKQTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMQEDLEEQGIIFKDTDSALRENEDIFKEH
FASVIPPADNKFAALNSAVWSGGSFIYVPKNVKLETPLQAYFRINSENMGQFERTLIIVDEGASVHYVEGCTAPVYTTNS
LHSAVVEIIVKKDAYCRYTTIQNWANNVFNLVTKRTFVYENGTMEWIDGNIGSKLTMKYPACYLLGEGARGMTLSIALAG
KGQVQDAGAKMMHMAPNTSSTIVSKSISKQGGKVVYRGIVHFGRKATGARSNIECDTLIMDNESTSDTIPYNEMLNDNIS
LEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG
>Mature_464_residues
AKKAPEVGDYKYGFHDKDVSIFRSERGLTEDIVREISKMKEEPQWMLDFRLKSLKQFYKMPMPTWGGDLSELNFDEITYY
VKPSEHTERSWDEVPEEIKQTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMQEDLEEQGIIFKDTDSALRENEDIFKEHF
ASVIPPADNKFAALNSAVWSGGSFIYVPKNVKLETPLQAYFRINSENMGQFERTLIIVDEGASVHYVEGCTAPVYTTNSL
HSAVVEIIVKKDAYCRYTTIQNWANNVFNLVTKRTFVYENGTMEWIDGNIGSKLTMKYPACYLLGEGARGMTLSIALAGK
GQVQDAGAKMMHMAPNTSSTIVSKSISKQGGKVVYRGIVHFGRKATGARSNIECDTLIMDNESTSDTIPYNEMLNDNISL
EHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=478, Percent_Identity=40.3765690376569, Blast_Score=366, Evalue=1e-102,
Organism=Escherichia coli, GI1787971, Length=154, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 52732; Mature: 52601

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKAPEVGDYKYGFHDKDVSIFRSERGLTEDIVREISKMKEEPQWMLDFRLKSLKQFYK
CCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
MPMPTWGGDLSELNFDEITYYVKPSEHTERSWDEVPEEIKQTFDKLGIPEAEQKYLAGVS
CCCCCCCCCCCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
AQYESEVVYHNMQEDLEEQGIIFKDTDSALRENEDIFKEHFASVIPPADNKFAALNSAVW
CHHHHHHHHHHHHHHHHHCCCEEECCCHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHC
SGGSFIYVPKNVKLETPLQAYFRINSENMGQFERTLIIVDEGASVHYVEGCTAPVYTTNS
CCCCEEEECCCCEECCCCEEEEEECCCCCCCEEEEEEEEECCCCEEEECCCCCCEEECCH
LHSAVVEIIVKKDAYCRYTTIQNWANNVFNLVTKRTFVYENGTMEWIDGNIGSKLTMKYP
HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHEEEEEECCEEEEECCCCCCEEEEECC
ACYLLGEGARGMTLSIALAGKGQVQDAGAKMMHMAPNTSSTIVSKSISKQGGKVVYRGIV
EEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEHHHH
HFGRKATGARSNIECDTLIMDNESTSDTIPYNEMLNDNISLEHEAKVSKVSEEQLFYLMS
HHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
RGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCCC
>Mature Secondary Structure 
AKKAPEVGDYKYGFHDKDVSIFRSERGLTEDIVREISKMKEEPQWMLDFRLKSLKQFYK
CCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
MPMPTWGGDLSELNFDEITYYVKPSEHTERSWDEVPEEIKQTFDKLGIPEAEQKYLAGVS
CCCCCCCCCCCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
AQYESEVVYHNMQEDLEEQGIIFKDTDSALRENEDIFKEHFASVIPPADNKFAALNSAVW
CHHHHHHHHHHHHHHHHHCCCEEECCCHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHC
SGGSFIYVPKNVKLETPLQAYFRINSENMGQFERTLIIVDEGASVHYVEGCTAPVYTTNS
CCCCEEEECCCCEECCCCEEEEEECCCCCCCEEEEEEEEECCCCEEEECCCCCCEEECCH
LHSAVVEIIVKKDAYCRYTTIQNWANNVFNLVTKRTFVYENGTMEWIDGNIGSKLTMKYP
HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHEEEEEECCEEEEECCCCCCEEEEECC
ACYLLGEGARGMTLSIALAGKGQVQDAGAKMMHMAPNTSSTIVSKSISKQGGKVVYRGIV
EEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEHHHH
HFGRKATGARSNIECDTLIMDNESTSDTIPYNEMLNDNISLEHEAKVSKVSEEQLFYLMS
HHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
RGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]