Click here to switch to the map view.

The map label for this gene is yusF [H]

Identifier: 222150787

GI number: 222150787

Start: 576725

End: 577114

Strand: Direct

Name: yusF [H]

Synonym: MCCL_0537

Alternate gene names: 222150787

Gene position: 576725-577114 (Clockwise)

Preceding gene: 222150786

Following gene: 222150788

Centisome position: 27.43

GC content: 39.23

Gene sequence:

>390_bases
ATGTCTGTAATTCAGAAGGTCATCGTAGTAGAGGGTAAACGAGACAAGAAAAGATTACAAGAAGTATTAACGGAACCTGT
ACATATTATATGCACACACGGCACAATGGGCATCGAGAAGCTAGATGCCATGATTGAAGACTTGTATCATCATAAAGTGT
ATATTATGACTGACAGCGACAAAGCAGGGCGCAAGATCAGAAACTGGTTTAAGCGTCATTTAAGCGAAGGACACCACATT
TATATTGATCCAAAGTATGGTGAGGTGAGTAATTGTCCGCTTGATTACTTAGCGAAAGTTGTCAGTCGTCATGACTTTGA
AATTAAAGAACAGTTTGAATGGAAAGGTAAGTCGCAACCCTATGAGTATCAGAACGCATTTGCAATCTAA

Upstream 100 bases:

>100_bases
CAAGCGCAATATGATGAAATGATTAATGCATAAATGATATACTTTCCTTGATAATAAATTTATCAAGGATTTTTTAATAT
GACGAAAAAGGTGATGGAAA

Downstream 100 bases:

>100_bases
AGATTTAGAAAGAATACAGGACAATTATATAATTTTTGGTTATACTCCTTTTTGTGGCACATGTAAACTTGCAGAAAAGA
TGCTGGATATCGTTAACATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MSVIQKVIVVEGKRDKKRLQEVLTEPVHIICTHGTMGIEKLDAMIEDLYHHKVYIMTDSDKAGRKIRNWFKRHLSEGHHI
YIDPKYGEVSNCPLDYLAKVVSRHDFEIKEQFEWKGKSQPYEYQNAFAI

Sequences:

>Translated_129_residues
MSVIQKVIVVEGKRDKKRLQEVLTEPVHIICTHGTMGIEKLDAMIEDLYHHKVYIMTDSDKAGRKIRNWFKRHLSEGHHI
YIDPKYGEVSNCPLDYLAKVVSRHDFEIKEQFEWKGKSQPYEYQNAFAI
>Mature_128_residues
SVIQKVIVVEGKRDKKRLQEVLTEPVHIICTHGTMGIEKLDAMIEDLYHHKVYIMTDSDKAGRKIRNWFKRHLSEGHHIY
IDPKYGEVSNCPLDYLAKVVSRHDFEIKEQFEWKGKSQPYEYQNAFAI

Specific function: Unknown

COG id: COG1658

COG function: function code L; Small primase-like proteins (Toprim domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006171 [H]

Pfam domain/function: PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 15217; Mature: 15086

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVIQKVIVVEGKRDKKRLQEVLTEPVHIICTHGTMGIEKLDAMIEDLYHHKVYIMTDSD
CHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCEEEEEECCC
KAGRKIRNWFKRHLSEGHHIYIDPKYGEVSNCPLDYLAKVVSRHDFEIKEQFEWKGKSQP
CCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCC
YEYQNAFAI
CCCCCCCCC
>Mature Secondary Structure 
SVIQKVIVVEGKRDKKRLQEVLTEPVHIICTHGTMGIEKLDAMIEDLYHHKVYIMTDSD
HHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCEEEEEECCC
KAGRKIRNWFKRHLSEGHHIYIDPKYGEVSNCPLDYLAKVVSRHDFEIKEQFEWKGKSQP
CCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCC
YEYQNAFAI
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]