| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
Click here to switch to the map view.
The map label for this gene is ytxJ [H]
Identifier: 222150739
GI number: 222150739
Start: 519149
End: 519469
Strand: Direct
Name: ytxJ [H]
Synonym: MCCL_0489
Alternate gene names: 222150739
Gene position: 519149-519469 (Clockwise)
Preceding gene: 222150738
Following gene: 222150740
Centisome position: 24.69
GC content: 31.46
Gene sequence:
>321_bases ATGATGATTAAAATTAATACAATCGAGCAGTTCGAGAAATTATTAGATGAACATACGAATGTATATTTGCTGAAACACTC TGATACTTGTCCAATCTCTGCAAGTGCATATGACCAGTTTGAGAACTTTATGTACGAAAGAGATATTAATGGTTATTACT TAATTGTTCAGCAAGCTAGAGAACTTTCAGATTATATTGCTGATTTAACTAAAGTAAAGCATGAATCCCCTCAAGCTTTT TATTTCTCAGATAAAGCTGTGAAATGGCATGACAGTCATAGAAATATTACAATAGCAAATCTTTCTAAAGCAGAAGAATA G
Upstream 100 bases:
>100_bases ATATTAAGATAAGGGTATAATAAATATTAATGAGATTGCTAAATATGTAGAAGCGTGATATATTTTATCTTTGAAGGCAC AGATAGGTGGAAAAAATAAG
Downstream 100 bases:
>100_bases AATGTACGATGCTTTATCAAAACAATCGATAACTAATAGAATTTCTATTAGTTATTTATTTTTGGAGGAAACGATGAAAA TATTAATAGCGATGGATACT
Product: hypothetical protein
Products: NA
Alternate protein names: ORF2; ORF3 [H]
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MMIKINTIEQFEKLLDEHTNVYLLKHSDTCPISASAYDQFENFMYERDINGYYLIVQQARELSDYIADLTKVKHESPQAF YFSDKAVKWHDSHRNITIANLSKAEE
Sequences:
>Translated_106_residues MMIKINTIEQFEKLLDEHTNVYLLKHSDTCPISASAYDQFENFMYERDINGYYLIVQQARELSDYIADLTKVKHESPQAF YFSDKAVKWHDSHRNITIANLSKAEE >Mature_106_residues MMIKINTIEQFEKLLDEHTNVYLLKHSDTCPISASAYDQFENFMYERDINGYYLIVQQARELSDYIADLTKVKHESPQAF YFSDKAVKWHDSHRNITIANLSKAEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022551 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF11009 DUF2847 [H]
EC number: NA
Molecular weight: Translated: 12509; Mature: 12509
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMIKINTIEQFEKLLDEHTNVYLLKHSDTCPISASAYDQFENFMYERDINGYYLIVQQAR CEEEECHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHH ELSDYIADLTKVKHESPQAFYFSDKAVKWHDSHRNITIANLSKAEE HHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCEEEEECCCCCCC >Mature Secondary Structure MMIKINTIEQFEKLLDEHTNVYLLKHSDTCPISASAYDQFENFMYERDINGYYLIVQQAR CEEEECHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHH ELSDYIADLTKVKHESPQAFYFSDKAVKWHDSHRNITIANLSKAEE HHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 8733232 [H]