| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222150738
Identifier: 222150738
GI number: 222150738
Start: 517869
End: 518768
Strand: Direct
Name: 222150738
Synonym: MCCL_0488
Alternate gene names: NA
Gene position: 517869-518768 (Clockwise)
Preceding gene: 222150735
Following gene: 222150739
Centisome position: 24.63
GC content: 28.67
Gene sequence:
>900_bases ATGAATAAAATTAATATATTTATATATTTAATAATGAGTATATCAATTATTCTTGCAGCGTGTGGGAATAAAGTAACGTC TGATATTAAAAATTATAAAGCGGAAATGCAGGATGTACAATCAGAAGAAAAGAAGCTTGTTCATGAACTAGATAAACTAG GATTAGATAAAGCTGATCAATTGCTCGGATCTGAAGTGACAGAAGAAAAGAAAAAGAAATTGAAGTTAATTGAAGCATCA ATACATAACAAGATAAAGCCTCAGCTGAAAGTTTATGAAAAAAAAGTAAAGGCAATTAATCCTGAAACCTCTGAAGTAAA GGATGTCCATAACATTTATAAAAGAAATTTAATCAAGAAAAAACAGTTTATTCTGGATCTGGAAAACTATATGAAGTTAT TTAATCAATCGATTCAATCTAATGAAAAGATACTTCAATATACGCAATTATTTGAAAAGAATAAGGCTTTAAGTGAACAA TATGCAAATCAAGTTTCAGCGAAGGGGAAAGATGCAAAGGAATACGAATTATTAGCGGACATTATTAATGATAATAGTAA ACAGCTTAAAAACAAAGTTGAATATTTATCAACTGATGCAACTGTCAAACAAAAACAGCAGTATATTGAAAATAAGCTAC TCCCATTTCTAAAATCGAATGTTGATAAGCTCAATCAGACTCAGATCTCTTCTAAACACGTTTTAGGGATGCGTAAAGCA ACGATTGAAATTTATTACAGCTTGATAAACTATTATAGGGAACGTAAGCTTGCGATGAATATTGAAACAAAGTTACAAAA TATGCCGATTCAAGATATTCTGAAAAATACAAAATATATTCAGTCAATTGATGATGAATATTATGAAGCTTTAAGAAAGC TAGAAGAAAAAAATAAATGA
Upstream 100 bases:
>100_bases TTAATTTCATTTTGAATCTTCCTTTCATGTCTGAAAAAATAAATCATGTTTTCATTCTAATCATTTTTAGGTATAATATT GATATCTAAGGAGAGCCGAT
Downstream 100 bases:
>100_bases TACCGTATAATGGTATCATTTATTTTTTTAAGTATTGTTGTTCTTTTTGTTTCTTCGATATGATGATATTTTTAGAAATT ACTGTAAGCACCCAGACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MNKINIFIYLIMSISIILAACGNKVTSDIKNYKAEMQDVQSEEKKLVHELDKLGLDKADQLLGSEVTEEKKKKLKLIEAS IHNKIKPQLKVYEKKVKAINPETSEVKDVHNIYKRNLIKKKQFILDLENYMKLFNQSIQSNEKILQYTQLFEKNKALSEQ YANQVSAKGKDAKEYELLADIINDNSKQLKNKVEYLSTDATVKQKQQYIENKLLPFLKSNVDKLNQTQISSKHVLGMRKA TIEIYYSLINYYRERKLAMNIETKLQNMPIQDILKNTKYIQSIDDEYYEALRKLEEKNK
Sequences:
>Translated_299_residues MNKINIFIYLIMSISIILAACGNKVTSDIKNYKAEMQDVQSEEKKLVHELDKLGLDKADQLLGSEVTEEKKKKLKLIEAS IHNKIKPQLKVYEKKVKAINPETSEVKDVHNIYKRNLIKKKQFILDLENYMKLFNQSIQSNEKILQYTQLFEKNKALSEQ YANQVSAKGKDAKEYELLADIINDNSKQLKNKVEYLSTDATVKQKQQYIENKLLPFLKSNVDKLNQTQISSKHVLGMRKA TIEIYYSLINYYRERKLAMNIETKLQNMPIQDILKNTKYIQSIDDEYYEALRKLEEKNK >Mature_299_residues MNKINIFIYLIMSISIILAACGNKVTSDIKNYKAEMQDVQSEEKKLVHELDKLGLDKADQLLGSEVTEEKKKKLKLIEAS IHNKIKPQLKVYEKKVKAINPETSEVKDVHNIYKRNLIKKKQFILDLENYMKLFNQSIQSNEKILQYTQLFEKNKALSEQ YANQVSAKGKDAKEYELLADIINDNSKQLKNKVEYLSTDATVKQKQQYIENKLLPFLKSNVDKLNQTQISSKHVLGMRKA TIEIYYSLINYYRERKLAMNIETKLQNMPIQDILKNTKYIQSIDDEYYEALRKLEEKNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35039; Mature: 35039
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKINIFIYLIMSISIILAACGNKVTSDIKNYKAEMQDVQSEEKKLVHELDKLGLDKADQ CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LLGSEVTEEKKKKLKLIEASIHNKIKPQLKVYEKKVKAINPETSEVKDVHNIYKRNLIKK HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH KQFILDLENYMKLFNQSIQSNEKILQYTQLFEKNKALSEQYANQVSAKGKDAKEYELLAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH IINDNSKQLKNKVEYLSTDATVKQKQQYIENKLLPFLKSNVDKLNQTQISSKHVLGMRKA HHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIEIYYSLINYYRERKLAMNIETKLQNMPIQDILKNTKYIQSIDDEYYEALRKLEEKNK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKINIFIYLIMSISIILAACGNKVTSDIKNYKAEMQDVQSEEKKLVHELDKLGLDKADQ CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LLGSEVTEEKKKKLKLIEASIHNKIKPQLKVYEKKVKAINPETSEVKDVHNIYKRNLIKK HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH KQFILDLENYMKLFNQSIQSNEKILQYTQLFEKNKALSEQYANQVSAKGKDAKEYELLAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH IINDNSKQLKNKVEYLSTDATVKQKQQYIENKLLPFLKSNVDKLNQTQISSKHVLGMRKA HHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIEIYYSLINYYRERKLAMNIETKLQNMPIQDILKNTKYIQSIDDEYYEALRKLEEKNK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA