| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is pabA [H]
Identifier: 222150716
GI number: 222150716
Start: 490983
End: 491564
Strand: Direct
Name: pabA [H]
Synonym: MCCL_0466
Alternate gene names: 222150716
Gene position: 490983-491564 (Clockwise)
Preceding gene: 222150711
Following gene: 222150717
Centisome position: 23.35
GC content: 40.21
Gene sequence:
>582_bases ATGATTTTAATGATAGACCATGATGATTCGTTTACATATAATATCGTTCATTACTTAGAAGCAATGGATGAAGCGGTACA CGTCGTACGTTCCAAAGTAGTGACGATTGAATACATAGAGGATTTATCTCCGGAGTTTATTATATTATCACCTGGACCAG GACACCCGGCAGAAGCAATTATCGCACATAAAGTTATCGATACATTCGGAGGACGTATTCCGATTCTTGGCATATGTCTT GGTTTTCAAGTGATCGTACAGCACTTTAATCATGAAGTTAAGAAGCTGTCACCAGTACACGGGCATATTGGCCATGTAGA GCATAACGGTACAGACTTATATCAAGGTGTAGAAGCGCCAGCACAAGTTGCAAGATATCACTCTTTAGGAACGATGGACA AGATTCAAAGGCCGTTAATCGTTACCGGTATAACGGATAATATTGTGATGAGTGTAGCACATGAATCATGGCCACTATAC GGTATTCAGTTTCATCCAGAATCTGTACTTACAACTTCCGGCTATACGATGCTCAACAATTTCTTAACGTTAGGACGTGA ATTTTATGCGCGCGGTCATTAA
Upstream 100 bases:
>100_bases AGGAACCTCTTATATTGAATTCGCTACTCATTATAACAGAAAAGCGTGTATAATAATATCTGTTACTTCAAGAAAACGTT TTTAGAAATGAGTGAAGTTT
Downstream 100 bases:
>100_bases CTTTCAACTTTATCGGGATGGGAAGACGATACCTGTTCGATATACCTTTACGAATCCTGTAAAAGTAGACAGAGTATATA CAGAGGATGGTATGCTGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Para-aminobenzoate synthase glutamine amidotransferase component II; ADC synthase; Anthranilate synthase component II [H]
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MILMIDHDDSFTYNIVHYLEAMDEAVHVVRSKVVTIEYIEDLSPEFIILSPGPGHPAEAIIAHKVIDTFGGRIPILGICL GFQVIVQHFNHEVKKLSPVHGHIGHVEHNGTDLYQGVEAPAQVARYHSLGTMDKIQRPLIVTGITDNIVMSVAHESWPLY GIQFHPESVLTTSGYTMLNNFLTLGREFYARGH
Sequences:
>Translated_193_residues MILMIDHDDSFTYNIVHYLEAMDEAVHVVRSKVVTIEYIEDLSPEFIILSPGPGHPAEAIIAHKVIDTFGGRIPILGICL GFQVIVQHFNHEVKKLSPVHGHIGHVEHNGTDLYQGVEAPAQVARYHSLGTMDKIQRPLIVTGITDNIVMSVAHESWPLY GIQFHPESVLTTSGYTMLNNFLTLGREFYARGH >Mature_193_residues MILMIDHDDSFTYNIVHYLEAMDEAVHVVRSKVVTIEYIEDLSPEFIILSPGPGHPAEAIIAHKVIDTFGGRIPILGICL GFQVIVQHFNHEVKKLSPVHGHIGHVEHNGTDLYQGVEAPAQVARYHSLGTMDKIQRPLIVTGITDNIVMSVAHESWPLY GIQFHPESVLTTSGYTMLNNFLTLGREFYARGH
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine and also involved in the synthesis of anthranilate [H]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI4504035, Length=139, Percent_Identity=35.2517985611511, Blast_Score=67, Evalue=7e-12, Organism=Escherichia coli, GI1789760, Length=185, Percent_Identity=41.0810810810811, Blast_Score=144, Evalue=4e-36, Organism=Escherichia coli, GI1787517, Length=190, Percent_Identity=36.3157894736842, Blast_Score=123, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6322638, Length=188, Percent_Identity=38.2978723404255, Blast_Score=133, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6324361, Length=211, Percent_Identity=28.9099526066351, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: =2.6.1.85; =4.1.3.27 [H]
Molecular weight: Translated: 21574; Mature: 21574
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILMIDHDDSFTYNIVHYLEAMDEAVHVVRSKVVTIEYIEDLSPEFIILSPGPGHPAEAI CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCEEEECCCCCCHHHHH IAHKVIDTFGGRIPILGICLGFQVIVQHFNHEVKKLSPVHGHIGHVEHNGTDLYQGVEAP HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCEECCCCHHHHCCCHH AQVARYHSLGTMDKIQRPLIVTGITDNIVMSVAHESWPLYGIQFHPESVLTTSGYTMLNN HHHHHHHCCCCHHHHCCCEEEECCCHHHHHEEHHCCCCEEEEEECCCHHEECCCHHHHHH FLTLGREFYARGH HHHHHHHHHCCCC >Mature Secondary Structure MILMIDHDDSFTYNIVHYLEAMDEAVHVVRSKVVTIEYIEDLSPEFIILSPGPGHPAEAI CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCEEEECCCCCCHHHHH IAHKVIDTFGGRIPILGICLGFQVIVQHFNHEVKKLSPVHGHIGHVEHNGTDLYQGVEAP HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCEECCCCHHHHCCCHH AQVARYHSLGTMDKIQRPLIVTGITDNIVMSVAHESWPLYGIQFHPESVLTTSGYTMLNN HHHHHHHCCCCHHHHCCCEEEECCCHHHHHEEHHCCCCEEEEEECCCHHEECCCHHHHHH FLTLGREFYARGH HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2123867; 7584024; 9384377 [H]