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The map label for this gene is ywaC [H]

Identifier: 222150678

GI number: 222150678

Start: 453483

End: 454139

Strand: Direct

Name: ywaC [H]

Synonym: MCCL_0428

Alternate gene names: 222150678

Gene position: 453483-454139 (Clockwise)

Preceding gene: 222150677

Following gene: 222150679

Centisome position: 21.57

GC content: 34.7

Gene sequence:

>657_bases
ATGGATATTGAGAATGTAATGCAGAAAATAGAGGACCAGTCAGAAATCATCAAGCTGGTCGAAGATTTTTCTTATTTATT
TAAAGAGTATGAGATGGGTTTACTAGAGTTAAAAAGTGATATAGAGGTCATTGACTTAGAATGGCAGGCGAAGTATGGTT
ATTCTCCATTTGAACACATAAAGACACGTATTAAGTCACCCATCTCACTACGTGACAAACTAAAACGTAAAGAAATAGAC
TTTAATTTAAAGAGCATACAGGAGAATATATTTGATATTATTGGTGTACGAATCGTTACTACCTTTGAAGATGATGTCTA
TAAAATATATGATATTTTAAAGGGACGTAATGATCTTAAAATTGTACGTGTGAAAGATTACATAAAAAATCCAAAACAGA
GTGGCTATAAAAGTCTGCATCTGATTGTTGAAACAGAACTAGTGCTCTCTGAAGGTGTAAAGTGGGTCCCTGCAGAAATT
CAGATTCGCACTTTATCCATGGATTTCTTCGCATCTACAGAGCATAAGCTACAATACAAATATAATACCAAGAAATTAAA
TGACAGCATACGTCGTGAACTGAAGGAAGTCGCGGATGCTTCAAGTGAACTGGATCGTAAGATGACAGAGGTGCGCAACA
CCATATTATTAGATTAA

Upstream 100 bases:

>100_bases
ACATATCCTATGAGAATGATATATTGAGTCTCCCTCAGGTGAGTGCGTTTATCACATTATTAAAAGAAGTCGTCAACGGC
GTATGAATAGAGGATAGCAA

Downstream 100 bases:

>100_bases
AGAAGTCGCAGTACGAAATCACTGGTATATGATATAAAAAGATGACAGGAGTATTTCCAGTCATCTTTTTAGGTTGATCG
GCTACATCATTAAGTCGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: (p)ppGpp synthase ywaC; Small alarmone synthase 2; SAS 2 [H]

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MDIENVMQKIEDQSEIIKLVEDFSYLFKEYEMGLLELKSDIEVIDLEWQAKYGYSPFEHIKTRIKSPISLRDKLKRKEID
FNLKSIQENIFDIIGVRIVTTFEDDVYKIYDILKGRNDLKIVRVKDYIKNPKQSGYKSLHLIVETELVLSEGVKWVPAEI
QIRTLSMDFFASTEHKLQYKYNTKKLNDSIRRELKEVADASSELDRKMTEVRNTILLD

Sequences:

>Translated_218_residues
MDIENVMQKIEDQSEIIKLVEDFSYLFKEYEMGLLELKSDIEVIDLEWQAKYGYSPFEHIKTRIKSPISLRDKLKRKEID
FNLKSIQENIFDIIGVRIVTTFEDDVYKIYDILKGRNDLKIVRVKDYIKNPKQSGYKSLHLIVETELVLSEGVKWVPAEI
QIRTLSMDFFASTEHKLQYKYNTKKLNDSIRRELKEVADASSELDRKMTEVRNTILLD
>Mature_218_residues
MDIENVMQKIEDQSEIIKLVEDFSYLFKEYEMGLLELKSDIEVIDLEWQAKYGYSPFEHIKTRIKSPISLRDKLKRKEID
FNLKSIQENIFDIIGVRIVTTFEDDVYKIYDILKGRNDLKIVRVKDYIKNPKQSGYKSLHLIVETELVLSEGVKWVPAEI
QIRTLSMDFFASTEHKLQYKYNTKKLNDSIRRELKEVADASSELDRKMTEVRNTILLD

Specific function: Functions as a (p)ppGpp synthase. In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. activities in respo

COG id: COG2357

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the relA/spoT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007685 [H]

Pfam domain/function: PF04607 RelA_SpoT [H]

EC number: =2.7.6.5 [H]

Molecular weight: Translated: 25807; Mature: 25807

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIENVMQKIEDQSEIIKLVEDFSYLFKEYEMGLLELKSDIEVIDLEWQAKYGYSPFEHI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHH
KTRIKSPISLRDKLKRKEIDFNLKSIQENIFDIIGVRIVTTFEDDVYKIYDILKGRNDLK
HHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHCCCCCEE
IVRVKDYIKNPKQSGYKSLHLIVETELVLSEGVKWVPAEIQIRTLSMDFFASTEHKLQYK
EEEEHHHHCCCCCCCHHHEEEEEHHHHHHHCCCEECCCEEEEEEEEEHHHHCCCCEEEEE
YNTKKLNDSIRRELKEVADASSELDRKMTEVRNTILLD
ECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDIENVMQKIEDQSEIIKLVEDFSYLFKEYEMGLLELKSDIEVIDLEWQAKYGYSPFEHI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHH
KTRIKSPISLRDKLKRKEIDFNLKSIQENIFDIIGVRIVTTFEDDVYKIYDILKGRNDLK
HHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHCCCCCEE
IVRVKDYIKNPKQSGYKSLHLIVETELVLSEGVKWVPAEIQIRTLSMDFFASTEHKLQYK
EEEEHHHHCCCCCCCHHHEEEEEHHHHHHHCCCEECCCEEEEEEEEEHHHHCCCCEEEEE
YNTKKLNDSIRRELKEVADASSELDRKMTEVRNTILLD
ECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]