| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222150615
Identifier: 222150615
GI number: 222150615
Start: 386768
End: 388243
Strand: Direct
Name: 222150615
Synonym: MCCL_0365
Alternate gene names: NA
Gene position: 386768-388243 (Clockwise)
Preceding gene: 222150614
Following gene: 222150616
Centisome position: 18.4
GC content: 36.65
Gene sequence:
>1476_bases ATGTCTAAATTTACACAGCGTTTGTCAATATTTTTAATAATTACACTTGTATTAGGATTAGTATTGCCTGTAAAAGCATC AGCAGCAACGGGGAAAGTAACAGATTTAACAATTCATAAAATAACAGGTTCTGAAGAAACAACAGCCACTTATGATCAGT TAGTAAATGGTACTGCGCCTGCAGGATCAAAGCCGATTTCTAATATTTCATTTACTTACTGGAAAGTAACATCAGAACAA TTAAAACAATTGAAAGCGAATCCTCAGAATTATGATACGTTAGAAAAAGTACGTACTTTGCTGTCAGAACCGACAGGAAC GACTCCAAAAACAGCAGCAGACGGAACAACTAAAGTACCAAATTTAGCAGAAGGTTACTACTGGTTCATCGAAGATAAAT CAACAGCGATTAAAGATGCTAAAGCAGTACCATTTGGACTTGAGCTTCCGATTACTAATGAGGCAGGAACAGGTTACATT AATGATCTGCACGTATTCCCGAAGAATACATTACAAGACTTGCCGACAATCGATAAGGATGTTAAATCTGATAATACAAA GTCTGCATCATTTGCAGTAGGTGAATCATTCAACTGGATTATTCAACCTTCTGTACCAAAGGGTATCGAAGAGTATGAAA AGTTTGAAGTTACAGATACAATCGATTCAAGATTGACATTTCAAGGTACGGAAAAAGTAAAAGTTACGATTAACGGTAAC GTACTTTCATCAGGAGACTATACAGCAACTTACAGTAATAATAAATTAATAGTCAGCTTTACAAAAGCAGGGCTAGGTAA ATTAAATGTAGAAAATCCTAAACTAGAAATCATCGTGCCAACAATGATCAATGACACAGCGGTTATGGGATTACCTATCA GTAATGATGCGACTTTAAATTTTGATAATGGTCACGGTGTGACAACTCAACCTGGTACAGACACACCACCACCAACTGTA CCTCCTACAGATATTCCGAAAGTCTATACTGGAGGAAAGAAGTTTGTTAAGACAAATGGTCAAGGAACTAATCTAGGTGA AGCAGAATTTGTTATCATGAATGGTGCAGGAGACTACCTTGTTCAAGACGGCAACCTTAAAGTTTCATGGACGAAATCTG AAAACGATGCGACGAAATTTATCTCATCAGCAGATGGTAAATTTGAAGTTAAAGGATTAGCGTATGGTGATGACAATGCT AACAACACAGGTGCAACAACTTATAAGATTAAAGAGGTAAAAGCACCTAAAGGTTACTCATTACCAACAAATCCAGTTAC AGAATTTACTGTAAACTCAACATCTTACCATGCTGACCCATCAGCTACAGTATTAGCAGATGCAGCAGCACAAGAAATCA TCAATAAGAAAACTGAAATACCAAACACTGGTGGAATCGGTACAGTTATCTTCACAGTAATAGGTATTGGACTAATGGCG CTAGCTTTAGTATTCTTTAGAAGAAAGCAAGCATAA
Upstream 100 bases:
>100_bases CATGGGAATTGCCGTATGGAGCAGAAAGAAAGTATTTATTCGACAATAATAATCCTGCATTAGCAGTTTATTATAGAAAT TAAAAAATTAGGAGGACTAT
Downstream 100 bases:
>100_bases CTTTGTTAAATGTGGTGGACGCTGTCCACCTCATTTTTTTAATAAGGAAGGCGATTTTTTTTGAAACCCGAAAAGAAAAC AAAGAAAAATAGGATCTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MSKFTQRLSIFLIITLVLGLVLPVKASAATGKVTDLTIHKITGSEETTATYDQLVNGTAPAGSKPISNISFTYWKVTSEQ LKQLKANPQNYDTLEKVRTLLSEPTGTTPKTAADGTTKVPNLAEGYYWFIEDKSTAIKDAKAVPFGLELPITNEAGTGYI NDLHVFPKNTLQDLPTIDKDVKSDNTKSASFAVGESFNWIIQPSVPKGIEEYEKFEVTDTIDSRLTFQGTEKVKVTINGN VLSSGDYTATYSNNKLIVSFTKAGLGKLNVENPKLEIIVPTMINDTAVMGLPISNDATLNFDNGHGVTTQPGTDTPPPTV PPTDIPKVYTGGKKFVKTNGQGTNLGEAEFVIMNGAGDYLVQDGNLKVSWTKSENDATKFISSADGKFEVKGLAYGDDNA NNTGATTYKIKEVKAPKGYSLPTNPVTEFTVNSTSYHADPSATVLADAAAQEIINKKTEIPNTGGIGTVIFTVIGIGLMA LALVFFRRKQA
Sequences:
>Translated_491_residues MSKFTQRLSIFLIITLVLGLVLPVKASAATGKVTDLTIHKITGSEETTATYDQLVNGTAPAGSKPISNISFTYWKVTSEQ LKQLKANPQNYDTLEKVRTLLSEPTGTTPKTAADGTTKVPNLAEGYYWFIEDKSTAIKDAKAVPFGLELPITNEAGTGYI NDLHVFPKNTLQDLPTIDKDVKSDNTKSASFAVGESFNWIIQPSVPKGIEEYEKFEVTDTIDSRLTFQGTEKVKVTINGN VLSSGDYTATYSNNKLIVSFTKAGLGKLNVENPKLEIIVPTMINDTAVMGLPISNDATLNFDNGHGVTTQPGTDTPPPTV PPTDIPKVYTGGKKFVKTNGQGTNLGEAEFVIMNGAGDYLVQDGNLKVSWTKSENDATKFISSADGKFEVKGLAYGDDNA NNTGATTYKIKEVKAPKGYSLPTNPVTEFTVNSTSYHADPSATVLADAAAQEIINKKTEIPNTGGIGTVIFTVIGIGLMA LALVFFRRKQA >Mature_490_residues SKFTQRLSIFLIITLVLGLVLPVKASAATGKVTDLTIHKITGSEETTATYDQLVNGTAPAGSKPISNISFTYWKVTSEQL KQLKANPQNYDTLEKVRTLLSEPTGTTPKTAADGTTKVPNLAEGYYWFIEDKSTAIKDAKAVPFGLELPITNEAGTGYIN DLHVFPKNTLQDLPTIDKDVKSDNTKSASFAVGESFNWIIQPSVPKGIEEYEKFEVTDTIDSRLTFQGTEKVKVTINGNV LSSGDYTATYSNNKLIVSFTKAGLGKLNVENPKLEIIVPTMINDTAVMGLPISNDATLNFDNGHGVTTQPGTDTPPPTVP PTDIPKVYTGGKKFVKTNGQGTNLGEAEFVIMNGAGDYLVQDGNLKVSWTKSENDATKFISSADGKFEVKGLAYGDDNAN NTGATTYKIKEVKAPKGYSLPTNPVTEFTVNSTSYHADPSATVLADAAAQEIINKKTEIPNTGGIGTVIFTVIGIGLMAL ALVFFRRKQA
Specific function: Major fimbrial subunit of A.naeslundii [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential). Fimbrium (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008454 - InterPro: IPR019948 - InterPro: IPR019931 - InterPro: IPR001899 [H]
Pfam domain/function: PF05738 Cna_B; PF00746 Gram_pos_anchor [H]
EC number: NA
Molecular weight: Translated: 52775; Mature: 52644
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFTQRLSIFLIITLVLGLVLPVKASAATGKVTDLTIHKITGSEETTATYDQLVNGTAP CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCC AGSKPISNISFTYWKVTSEQLKQLKANPQNYDTLEKVRTLLSEPTGTTPKTAADGTTKVP CCCCCCCCCEEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC NLAEGYYWFIEDKSTAIKDAKAVPFGLELPITNEAGTGYINDLHVFPKNTLQDLPTIDKD CCCCCEEEEEECCCCHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCHHHHHCCCCCHH VKSDNTKSASFAVGESFNWIIQPSVPKGIEEYEKFEVTDTIDSRLTFQGTEKVKVTINGN HCCCCCCCCEEEECCCCCEEECCCCCCCHHHHHHEEEEECCCCEEEECCCCEEEEEECCC VLSSGDYTATYSNNKLIVSFTKAGLGKLNVENPKLEIIVPTMINDTAVMGLPISNDATLN EECCCCEEEEECCCEEEEEEECCCCCEEECCCCEEEEEEEEEECCCEEEEEECCCCCEEE FDNGHGVTTQPGTDTPPPTVPPTDIPKVYTGGKKFVKTNGQGTNLGEAEFVIMNGAGDYL ECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCEEEEEEECCCCEE VQDGNLKVSWTKSENDATKFISSADGKFEVKGLAYGDDNANNTGATTYKIKEVKAPKGYS EECCCEEEEEECCCCHHHHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCC LPTNPVTEFTVNSTSYHADPSATVLADAAAQEIINKKTEIPNTGGIGTVIFTVIGIGLMA CCCCCCEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH LALVFFRRKQA HHHHHHHHCCC >Mature Secondary Structure SKFTQRLSIFLIITLVLGLVLPVKASAATGKVTDLTIHKITGSEETTATYDQLVNGTAP CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCC AGSKPISNISFTYWKVTSEQLKQLKANPQNYDTLEKVRTLLSEPTGTTPKTAADGTTKVP CCCCCCCCCEEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC NLAEGYYWFIEDKSTAIKDAKAVPFGLELPITNEAGTGYINDLHVFPKNTLQDLPTIDKD CCCCCEEEEEECCCCHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCHHHHHCCCCCHH VKSDNTKSASFAVGESFNWIIQPSVPKGIEEYEKFEVTDTIDSRLTFQGTEKVKVTINGN HCCCCCCCCEEEECCCCCEEECCCCCCCHHHHHHEEEEECCCCEEEECCCCEEEEEECCC VLSSGDYTATYSNNKLIVSFTKAGLGKLNVENPKLEIIVPTMINDTAVMGLPISNDATLN EECCCCEEEEECCCEEEEEEECCCCCEEECCCCEEEEEEEEEECCCEEEEEECCCCCEEE FDNGHGVTTQPGTDTPPPTVPPTDIPKVYTGGKKFVKTNGQGTNLGEAEFVIMNGAGDYL ECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCEEEEEEECCCCEE VQDGNLKVSWTKSENDATKFISSADGKFEVKGLAYGDDNANNTGATTYKIKEVKAPKGYS EECCCEEEEEECCCCHHHHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCC LPTNPVTEFTVNSTSYHADPSATVLADAAAQEIINKKTEIPNTGGIGTVIFTVIGIGLMA CCCCCCEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH LALVFFRRKQA HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2900829 [H]