Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

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The map label for this gene is ybbP [H]

Identifier: 222150571

GI number: 222150571

Start: 334855

End: 335664

Strand: Direct

Name: ybbP [H]

Synonym: MCCL_0321

Alternate gene names: 222150571

Gene position: 334855-335664 (Clockwise)

Preceding gene: 222150569

Following gene: 222150572

Centisome position: 15.93

GC content: 38.77

Gene sequence:

>810_bases
ATGCAATTGACGCATGTTTTTGATAACTTAAGTACAATAAAAGTTATCACAGGCATCATTGACCTCTTAATTGTATGGTA
CGTTATCTACCTTATGATCAATGCAATCAAGGGTACGAAAGCAATACAATTATTAAAGGGTATCTTCTTTATTCTGATTG
GTAAATTAATCAGTGACTCTTTAGGTTTAACAACCACTTCTAAGATATTTGATATGGTAATCGACTGGGGATTCCTGGCC
ATTATCGTTATTTTTCAGCCAGAATTAAGAAGAGCGCTCGAGCAGTTAGGTCGAGGAAGTTTGTTTAAACGTAACGCCGC
AAATTTAAAGGTGAGTCAGGCTAAGCTGACAGATGCGATGGTGAAATCCATTCAGTATATGGCAAAGCGTCGTATAGGTG
CTTTAATTGTCTTTGAAAAGGAAACAGGGCTACAAGATTACATAGAAACAGGGATACCAATTTATGCAGATATCTCTACA
GAATTAATGATTAATATCTTTATTCCGAATACGCCGCTCCATGATGGTGCGATGATCATTAGAGGCGATAAGATTGCAGT
TGCTGCGAGTTACCTGCCGTTATCAGATAGCCCTAAGATACAAAAGAGTCTTGGAACGAGACATCGTGCAGCTGTTGGTA
TATCAGAAGTATCTGATGCATTTACAGTTGTTGTCTCTGAGGAAACAGGCGATATATCTGTTACTTATAATGGTAGACTG
CGCAAAGATGTATCTCTTGAAGTGCTGGAAGCACTGCTTACAGAACATTGGTTCGGCGCCCACTTATCTAAGAAAGGTGT
GGTGAAATAA

Upstream 100 bases:

>100_bases
TAATAATCGAATGAATATTGAAAAAATGTATTAAACTATACGAGGAATTGCGCTTTAACATGATATAATATAGGTTAGTA
TGAATTATGGAGGAGATACA

Downstream 100 bases:

>100_bases
TGTTAGAGAATAAATGGGGATTAAGACTCGTTGCATTTTTACTTGCACTCGGCATCTTTTTACAAGTGAATAATGTATTT
GAAGTTATCAGCAATGATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MQLTHVFDNLSTIKVITGIIDLLIVWYVIYLMINAIKGTKAIQLLKGIFFILIGKLISDSLGLTTTSKIFDMVIDWGFLA
IIVIFQPELRRALEQLGRGSLFKRNAANLKVSQAKLTDAMVKSIQYMAKRRIGALIVFEKETGLQDYIETGIPIYADIST
ELMINIFIPNTPLHDGAMIIRGDKIAVAASYLPLSDSPKIQKSLGTRHRAAVGISEVSDAFTVVVSEETGDISVTYNGRL
RKDVSLEVLEALLTEHWFGAHLSKKGVVK

Sequences:

>Translated_269_residues
MQLTHVFDNLSTIKVITGIIDLLIVWYVIYLMINAIKGTKAIQLLKGIFFILIGKLISDSLGLTTTSKIFDMVIDWGFLA
IIVIFQPELRRALEQLGRGSLFKRNAANLKVSQAKLTDAMVKSIQYMAKRRIGALIVFEKETGLQDYIETGIPIYADIST
ELMINIFIPNTPLHDGAMIIRGDKIAVAASYLPLSDSPKIQKSLGTRHRAAVGISEVSDAFTVVVSEETGDISVTYNGRL
RKDVSLEVLEALLTEHWFGAHLSKKGVVK
>Mature_269_residues
MQLTHVFDNLSTIKVITGIIDLLIVWYVIYLMINAIKGTKAIQLLKGIFFILIGKLISDSLGLTTTSKIFDMVIDWGFLA
IIVIFQPELRRALEQLGRGSLFKRNAANLKVSQAKLTDAMVKSIQYMAKRRIGALIVFEKETGLQDYIETGIPIYADIST
ELMINIFIPNTPLHDGAMIIRGDKIAVAASYLPLSDSPKIQKSLGTRHRAAVGISEVSDAFTVVVSEETGDISVTYNGRL
RKDVSLEVLEALLTEHWFGAHLSKKGVVK

Specific function: Unknown

COG id: COG1624

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014046
- InterPro:   IPR003390 [H]

Pfam domain/function: PF02457 DisA_N [H]

EC number: NA

Molecular weight: Translated: 29793; Mature: 29793

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTHVFDNLSTIKVITGIIDLLIVWYVIYLMINAIKGTKAIQLLKGIFFILIGKLISDS
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
LGLTTTSKIFDMVIDWGFLAIIVIFQPELRRALEQLGRGSLFKRNAANLKVSQAKLTDAM
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHH
VKSIQYMAKRRIGALIVFEKETGLQDYIETGIPIYADISTELMINIFIPNTPLHDGAMII
HHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCEEEECCEEEEEEEEECCCCCCCCEEEE
RGDKIAVAASYLPLSDSPKIQKSLGTRHRAAVGISEVSDAFTVVVSEETGDISVTYNGRL
ECCEEEEEEEECCCCCCCHHHHHHCCHHHHHHCHHHHCCEEEEEEECCCCCEEEEECCCC
RKDVSLEVLEALLTEHWFGAHLSKKGVVK
CCCCCHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MQLTHVFDNLSTIKVITGIIDLLIVWYVIYLMINAIKGTKAIQLLKGIFFILIGKLISDS
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
LGLTTTSKIFDMVIDWGFLAIIVIFQPELRRALEQLGRGSLFKRNAANLKVSQAKLTDAM
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHH
VKSIQYMAKRRIGALIVFEKETGLQDYIETGIPIYADISTELMINIFIPNTPLHDGAMII
HHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCEEEECCEEEEEEEEECCCCCCCCEEEE
RGDKIAVAASYLPLSDSPKIQKSLGTRHRAAVGISEVSDAFTVVVSEETGDISVTYNGRL
ECCEEEEEEEECCCCCCCHHHHHHCCHHHHHHCHHHHCCEEEEEEECCCCCEEEEECCCC
RKDVSLEVLEALLTEHWFGAHLSKKGVVK
CCCCCHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]