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The map label for this gene is yvfU [H]

Identifier: 222150544

GI number: 222150544

Start: 302274

End: 302852

Strand: Direct

Name: yvfU [H]

Synonym: MCCL_0294

Alternate gene names: 222150544

Gene position: 302274-302852 (Clockwise)

Preceding gene: 222150543

Following gene: 222150545

Centisome position: 14.38

GC content: 31.26

Gene sequence:

>579_bases
ATGCTACGAGAAGCAATGAAACAGCTGTTGATGCTTACCGGTAAGTTCAAAAGTGTGATAAGTGTACGGAATGGAAGAGA
AGCTATTGAAAATCTAAATAAAGATATAGATGTTGCGATACTTGATATTGAAATGCCGTATATAGATGGTTTGGATGTTT
TAAATTATATTAGAGAACATAATATTAGTTGCAAGGTTATTATTGTCACAACTTTTAAAAGACCAGGCTACTTTGAAAAA
GCTTTAAATTTAAATGTTGATGCATATGTATTGAAAGAAAGGTCCGTTGATGATCTAATTTTAACGATAGATAAGGTGAT
GAATGGCCAAAAAGAATATAGTCAAGAACTCCTGCCGATGATGCTGACTAAAAATCCATTGAATGAAAAAGAACAAGCAA
TATTGCAATTGATAGGTGAAGGATTGTCCAGTAAAGAAATTAGTGAACAGTTATACTTGAGTCATGGAACTGTGAGAAAT
TATACAAGTATAATCACAGAAAAATTAGGTGCTGAAAATAAAATTAATGCATGGCGAATTGCAAGTGATTTTGGTTTTAT
TAAGTCTTTATCTAATTAG

Upstream 100 bases:

>100_bases
TAAATGGAAGAATGGTTATTGATAAGTTGGAGAAAGGGACTGTTATTACGATTAGAAATTGAGGTGTCTTATGAATATAC
TACATGCGGAAGATCAAAGT

Downstream 100 bases:

>100_bases
GGTATAGATCTTAGAAGGACTAAGCAAACCATCAAATTGTACTTTAAATTCAATAAATGTTAATTTCTTAGAAGAGATTA
TAAAGTATAGCGAGTAAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MLREAMKQLLMLTGKFKSVISVRNGREAIENLNKDIDVAILDIEMPYIDGLDVLNYIREHNISCKVIIVTTFKRPGYFEK
ALNLNVDAYVLKERSVDDLILTIDKVMNGQKEYSQELLPMMLTKNPLNEKEQAILQLIGEGLSSKEISEQLYLSHGTVRN
YTSIITEKLGAENKINAWRIASDFGFIKSLSN

Sequences:

>Translated_192_residues
MLREAMKQLLMLTGKFKSVISVRNGREAIENLNKDIDVAILDIEMPYIDGLDVLNYIREHNISCKVIIVTTFKRPGYFEK
ALNLNVDAYVLKERSVDDLILTIDKVMNGQKEYSQELLPMMLTKNPLNEKEQAILQLIGEGLSSKEISEQLYLSHGTVRN
YTSIITEKLGAENKINAWRIASDFGFIKSLSN
>Mature_192_residues
MLREAMKQLLMLTGKFKSVISVRNGREAIENLNKDIDVAILDIEMPYIDGLDVLNYIREHNISCKVIIVTTFKRPGYFEK
ALNLNVDAYVLKERSVDDLILTIDKVMNGQKEYSQELLPMMLTKNPLNEKEQAILQLIGEGLSSKEISEQLYLSHGTVRN
YTSIITEKLGAENKINAWRIASDFGFIKSLSN

Specific function: Member of the two-component regulatory system yvfT/yvfU [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790102, Length=182, Percent_Identity=28.5714285714286, Blast_Score=83, Evalue=9e-18,
Organism=Escherichia coli, GI1788521, Length=188, Percent_Identity=27.6595744680851, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788546, Length=159, Percent_Identity=31.4465408805031, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787473, Length=174, Percent_Identity=28.1609195402299, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI1786747, Length=180, Percent_Identity=26.1111111111111, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 21871; Mature: 21871

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLREAMKQLLMLTGKFKSVISVRNGREAIENLNKDIDVAILDIEMPYIDGLDVLNYIREH
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHC
NISCKVIIVTTFKRPGYFEKALNLNVDAYVLKERSVDDLILTIDKVMNGQKEYSQELLPM
CCCEEEEEEEECCCCCHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHH
MLTKNPLNEKEQAILQLIGEGLSSKEISEQLYLSHGTVRNYTSIITEKLGAENKINAWRI
HHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEE
ASDFGFIKSLSN
HHHHHHHHHCCC
>Mature Secondary Structure
MLREAMKQLLMLTGKFKSVISVRNGREAIENLNKDIDVAILDIEMPYIDGLDVLNYIREH
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHC
NISCKVIIVTTFKRPGYFEKALNLNVDAYVLKERSVDDLILTIDKVMNGQKEYSQELLPM
CCCEEEEEEEECCCCCHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHH
MLTKNPLNEKEQAILQLIGEGLSSKEISEQLYLSHGTVRNYTSIITEKLGAENKINAWRI
HHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEE
ASDFGFIKSLSN
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]