| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is yvfT [H]
Identifier: 222150543
GI number: 222150543
Start: 301183
End: 302235
Strand: Direct
Name: yvfT [H]
Synonym: MCCL_0293
Alternate gene names: 222150543
Gene position: 301183-302235 (Clockwise)
Preceding gene: 222150542
Following gene: 222150544
Centisome position: 14.33
GC content: 29.53
Gene sequence:
>1053_bases GTGAAGCGGTTATTAGAAAATATTATTTATTATGGGATTTCATTGATTTTTATTATTATCCCTATAATTCTTAGTTTCCA GTTACAAAACAATTTATTATTTGTAACGACCTGGATCTGTATCGGAATATATATATTTAGTGTATTTTGTTTTATGAAAG TTCCAGAAAAATTTATGCTTGTTTTATGGTTCTTGTTAATACTAGCGATAGTATATTTTTCTTTTGTTATTAACTTTGGA ACTGTTATGTTCTTCATATTTCCCGCTAGTTTACTTGCCTATCATTTAGAAAGAGAACTTAATAGTGTGTATGGGGAAAT CATGATTTGTGCAATGATAGTGTGTATTATACGTGGGGTTATAATTTATCAATCAGAGTGGTATTCAATAGTTCCACTTA GTTTGTTTTTAGTTTTTATGGTCATCTCAATGGATATGAATGGAAAAAGAATAAGAATGAAAGAAGAAATTAACAAGAAA AATGAAGAACTTGCACATTTAGCTGGAGAGATAGAAAGGAATAGAATTTCCCGGGATTTACACGATTCATTAGGCCATGT TTTTAGTACTTTATCTGTCAAAGCAGAATTAGCAAATAAGCTTGTTGAAATTAATCCGGAATTGGCGAAAAAGGAGTTAG CAGAAATTCACGAACTCTCCAAAGTATCTTTATTTAAAGTTAGAGATATCATCAATGATATTCAGAATATCAATTTGGAA CAAGAACTAAGTAATTTAAGGATTATACTTAATAAATTAGAAATAACATTGGAAATGCATGTTAAGTGTGACTTTTCTCC TGAGGTTGAATACCAAATTGTCATGATAATAAAGGAGCTTGTAAATAATATTATTAAGCATAGTGAAGCTCGAAATGTTA TTTTAGAACTCACAGGCGAAGCAGATTTATTTAACCTTAAGATATTTGATGATGGAATAGGCATGCACCCAGATACTCAT TTAAAGAGTATTAGTTATAGAACGAAACAACTAAATGGAAGAATGGTTATTGATAAGTTGGAGAAAGGGACTGTTATTAC GATTAGAAATTGA
Upstream 100 bases:
>100_bases GTGATAACTATCCATATGAATCTATATTAATATTAAGTTTATATGGGATGGTTTTTGTTATATTAAGTTTATGGATAAGA AAAAATGTGGAAGTGATGTA
Downstream 100 bases:
>100_bases GGTGTCTTATGAATATACTACATGCGGAAGATCAAAGTATGCTACGAGAAGCAATGAAACAGCTGTTGATGCTTACCGGT AAGTTCAAAAGTGTGATAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MKRLLENIIYYGISLIFIIIPIILSFQLQNNLLFVTTWICIGIYIFSVFCFMKVPEKFMLVLWFLLILAIVYFSFVINFG TVMFFIFPASLLAYHLERELNSVYGEIMICAMIVCIIRGVIIYQSEWYSIVPLSLFLVFMVISMDMNGKRIRMKEEINKK NEELAHLAGEIERNRISRDLHDSLGHVFSTLSVKAELANKLVEINPELAKKELAEIHELSKVSLFKVRDIINDIQNINLE QELSNLRIILNKLEITLEMHVKCDFSPEVEYQIVMIIKELVNNIIKHSEARNVILELTGEADLFNLKIFDDGIGMHPDTH LKSISYRTKQLNGRMVIDKLEKGTVITIRN
Sequences:
>Translated_350_residues MKRLLENIIYYGISLIFIIIPIILSFQLQNNLLFVTTWICIGIYIFSVFCFMKVPEKFMLVLWFLLILAIVYFSFVINFG TVMFFIFPASLLAYHLERELNSVYGEIMICAMIVCIIRGVIIYQSEWYSIVPLSLFLVFMVISMDMNGKRIRMKEEINKK NEELAHLAGEIERNRISRDLHDSLGHVFSTLSVKAELANKLVEINPELAKKELAEIHELSKVSLFKVRDIINDIQNINLE QELSNLRIILNKLEITLEMHVKCDFSPEVEYQIVMIIKELVNNIIKHSEARNVILELTGEADLFNLKIFDDGIGMHPDTH LKSISYRTKQLNGRMVIDKLEKGTVITIRN >Mature_350_residues MKRLLENIIYYGISLIFIIIPIILSFQLQNNLLFVTTWICIGIYIFSVFCFMKVPEKFMLVLWFLLILAIVYFSFVINFG TVMFFIFPASLLAYHLERELNSVYGEIMICAMIVCIIRGVIIYQSEWYSIVPLSLFLVFMVISMDMNGKRIRMKEEINKK NEELAHLAGEIERNRISRDLHDSLGHVFSTLSVKAELANKLVEINPELAKKELAEIHELSKVSLFKVRDIINDIQNINLE QELSNLRIILNKLEITLEMHVKCDFSPEVEYQIVMIIKELVNNIIKHSEARNVILELTGEADLFNLKIFDDGIGMHPDTH LKSISYRTKQLNGRMVIDKLEKGTVITIRN
Specific function: Member of the two-component regulatory system yvfT/yvfU. Probably activates yvfU by phosphorylation [H]
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011712 [H]
Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 40653; Mature: 40653
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLENIIYYGISLIFIIIPIILSFQLQNNLLFVTTWICIGIYIFSVFCFMKVPEKFML CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH VLWFLLILAIVYFSFVINFGTVMFFIFPASLLAYHLERELNSVYGEIMICAMIVCIIRGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIYQSEWYSIVPLSLFLVFMVISMDMNGKRIRMKEEINKKNEELAHLAGEIERNRISRDL HEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHH HDSLGHVFSTLSVKAELANKLVEINPELAKKELAEIHELSKVSLFKVRDIINDIQNINLE HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QELSNLRIILNKLEITLEMHVKCDFSPEVEYQIVMIIKELVNNIIKHSEARNVILELTGE HHHHHHHHHHHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECC ADLFNLKIFDDGIGMHPDTHLKSISYRTKQLNGRMVIDKLEKGTVITIRN CCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEC >Mature Secondary Structure MKRLLENIIYYGISLIFIIIPIILSFQLQNNLLFVTTWICIGIYIFSVFCFMKVPEKFML CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH VLWFLLILAIVYFSFVINFGTVMFFIFPASLLAYHLERELNSVYGEIMICAMIVCIIRGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIYQSEWYSIVPLSLFLVFMVISMDMNGKRIRMKEEINKKNEELAHLAGEIERNRISRDL HEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHH HDSLGHVFSTLSVKAELANKLVEINPELAKKELAEIHELSKVSLFKVRDIINDIQNINLE HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QELSNLRIILNKLEITLEMHVKCDFSPEVEYQIVMIIKELVNNIIKHSEARNVILELTGE HHHHHHHHHHHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECC ADLFNLKIFDDGIGMHPDTHLKSISYRTKQLNGRMVIDKLEKGTVITIRN CCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]