| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
Click here to switch to the map view.
The map label for this gene is crtK [H]
Identifier: 222150292
GI number: 222150292
Start: 47084
End: 47575
Strand: Direct
Name: crtK [H]
Synonym: MCCL_0042
Alternate gene names: 222150292
Gene position: 47084-47575 (Clockwise)
Preceding gene: 222150290
Following gene: 222150293
Centisome position: 2.24
GC content: 35.37
Gene sequence:
>492_bases ATGACGAATACTAAGAAAATAACTAGAACACTTATACCACTCTCTGGAGGTTTAATCGTTGGAAGGCTAACAGCTAAGGC GCAAGATGATTATAAACATTATAGAAAACCACCATTTTCACCACCTGCAATTACTTTTCCAATTATTTGGCCAATATTAT ATATGTCAATGGGTGTGGCGTATCAAAGAGCGATGGATAACGCTAAAAATGAGACTGAAAGCAGTGAACTTAAGCGTGCA CATTATACCCAGCTTGGCTTGAATTACATATGGTCTATGCTATATTTTAATCTAAAATTTAGAAAGGCATCATTACTAGA AAGTTATGCATTATTAGCTGCAGGGAGTATTACTGCTACGAAATTTTATAAGATGGATAGAGCTGCAGGACATTTGATGG TTCCTTATGTGATGTGGTTGAGTTATGCAAGTTATTTAAACGGAGGCAACTGGATTTTAAATAAGGATAAAGAAGGTTAC TCTAGAGACTAA
Upstream 100 bases:
>100_bases CTTTCTTACTGCAATATAGGATTAATGAAAGGCAAATCCTTTTTTGGTGTTTCATTATTTATCTACTTAATTTTGGGTAT AAGTATTATGGAGGTAAAAA
Downstream 100 bases:
>100_bases CAATAAAAATATATAATATGCAATTATTTGAAGGGATACGATATTCAAGTATATCTGCATATCGCCTTGCTCAAAAGAAG TATAGTAGAGTAGTAATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MTNTKKITRTLIPLSGGLIVGRLTAKAQDDYKHYRKPPFSPPAITFPIIWPILYMSMGVAYQRAMDNAKNETESSELKRA HYTQLGLNYIWSMLYFNLKFRKASLLESYALLAAGSITATKFYKMDRAAGHLMVPYVMWLSYASYLNGGNWILNKDKEGY SRD
Sequences:
>Translated_163_residues MTNTKKITRTLIPLSGGLIVGRLTAKAQDDYKHYRKPPFSPPAITFPIIWPILYMSMGVAYQRAMDNAKNETESSELKRA HYTQLGLNYIWSMLYFNLKFRKASLLESYALLAAGSITATKFYKMDRAAGHLMVPYVMWLSYASYLNGGNWILNKDKEGY SRD >Mature_162_residues TNTKKITRTLIPLSGGLIVGRLTAKAQDDYKHYRKPPFSPPAITFPIIWPILYMSMGVAYQRAMDNAKNETESSELKRAH YTQLGLNYIWSMLYFNLKFRKASLLESYALLAAGSITATKFYKMDRAAGHLMVPYVMWLSYASYLNGGNWILNKDKEGYS RD
Specific function: Unknown
COG id: COG3476
COG function: function code T; Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TspO/BZRP family [H]
Homologues:
Organism=Drosophila melanogaster, GI19920472, Length=157, Percent_Identity=36.9426751592357, Blast_Score=94, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004307 [H]
Pfam domain/function: PF03073 TspO_MBR [H]
EC number: NA
Molecular weight: Translated: 18665; Mature: 18534
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTKKITRTLIPLSGGLIVGRLTAKAQDDYKHYRKPPFSPPAITFPIIWPILYMSMGVA CCCHHHHHHHHHCCCCCEEEEEEHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH YQRAMDNAKNETESSELKRAHYTQLGLNYIWSMLYFNLKFRKASLLESYALLAAGSITAT HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH KFYKMDRAAGHLMVPYVMWLSYASYLNGGNWILNKDKEGYSRD HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCC >Mature Secondary Structure TNTKKITRTLIPLSGGLIVGRLTAKAQDDYKHYRKPPFSPPAITFPIIWPILYMSMGVA CCHHHHHHHHHCCCCCEEEEEEHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH YQRAMDNAKNETESSELKRAHYTQLGLNYIWSMLYFNLKFRKASLLESYALLAAGSITAT HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH KFYKMDRAAGHLMVPYVMWLSYASYLNGGNWILNKDKEGYSRD HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2747617 [H]